; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g15760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g15760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationchr6:12421262..12425341
RNA-Seq ExpressionMoc06g15760
SyntenyMoc06g15760
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143648.1 uncharacterized protein LOC111013509 [Momordica charantia]1.5e-4361.78Show/hide
Query:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHVKSKCLLL----
        MTHEI+MKGNME+DVKKKKSL +KSTSF+   ES+EELNE+ELAYLSKKFKKH KKRHFPK+TNSQDAKGEK+TRD+IICYECKKAGHV+S+C LL    
Subjt:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHVKSKCLLL----

Query:  ----------------------TGKEVANICFMAFEDEDDDDEICFENHSFDEFMDA
                              +G+EVAN+CFMAF DEDDD+E+C  +     ++D+
Subjt:  ----------------------TGKEVANICFMAFEDEDDDDEICFENHSFDEFMDA

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]1.1e-1938.46Show/hide
Query:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIK-KRHFPKRTNSQ-DAKGEKSTRDVIICYECKKAGHVKSKCLLLTG
        MTHEIIMK ++E + KKKKS+ +K+ S E   E ++ L+E ++AY S+K+K  IK K++F K  ++Q ++KGEKS +D +ICYECK++GH+++ C LL  
Subjt:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIK-KRHFPKRTNSQ-DAKGEKSTRDVIICYECKKAGHVKSKCLLLTG

Query:  -----------------------KEVANICFMAFEDEDD--DDEICFENHSFDEFMDAYNEIKEEFEKL
                               +E+AN+  MA  D+DD  DD++  E  S DE  + +  ++ + EKL
Subjt:  -----------------------KEVANICFMAFEDEDD--DDEICFENHSFDEFMDAYNEIKEEFEKL

XP_038882256.1 uncharacterized protein LOC120073483 [Benincasa hispida]4.3e-1958.62Show/hide
Query:  MKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHVKSKC
        MK N+E+DVKKKK+L +KST  +   E++ ELN++E AYL+KKFK H +KR+F K+ N+Q+ KGEKS +D IICYE KK GHVK  C
Subjt:  MKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHVKSKC

XP_038885875.1 uncharacterized protein LOC120076181 [Benincasa hispida]7.2e-2245.39Show/hide
Query:  MKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHVKSKC-------------
        MK N+E+DVKKKKSL +KST  +   E++ ELN++E AYL+KKFK H +KR+F K+ N+Q+ KGEKS RD II YECKK GHVK  C             
Subjt:  MKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHVKSKC-------------

Query:  -------------------LLLTGKEVANICFMAFEDEDDD-DEICFENHSF
                              + +EVAN+C MAF D+DDD DE C +   F
Subjt:  -------------------LLLTGKEVANICFMAFEDEDDD-DEICFENHSF

XP_038895919.1 uncharacterized protein LOC120084093 [Benincasa hispida]1.5e-2750.99Show/hide
Query:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHV-----------
        M HEIIMK N+E+DVKKKK+L +KST  +   E++ ELN++E AYL+KKFKKH +KR+F K+ N+Q+ KGEKS RD IICYECKK GHV           
Subjt:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHV-----------

Query:  --KSKCLLLTGKE-----------VANICFMAF-EDEDDDDEICFENHSFD
            K +  T  E           VAN+C MAF +D+DDDDE+  EN +FD
Subjt:  --KSKCLLLTGKE-----------VANICFMAF-EDEDDDDEICFENHSFD

TrEMBL top hitse value%identityAlignment
A0A5A7SRY3 Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein9.8e-1735.5Show/hide
Query:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIK-KRHFPKRTNSQ-DAKGEKSTRDVIICYECKKAGHVKSKCLLLTG
        MTHEIIMK +++ + KKKKS+ + + S E   E +++L+E ++AY S+K++  IK K++F K  ++Q ++KGEK+ +D +I YECKKAG++++ C  L  
Subjt:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIK-KRHFPKRTNSQ-DAKGEKSTRDVIICYECKKAGHVKSKCLLLTG

Query:  -----------------------KEVANICFMAFEDEDD--DDEICFENHSFDEFMDAYNEIKEEFEKL
                               +E+AN+  MA  D++D  DDE+  E+ S DE  + +  ++ + EKL
Subjt:  -----------------------KEVANICFMAFEDEDD--DDEICFENHSFDEFMDAYNEIKEEFEKL

A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein4.1e-1534.91Show/hide
Query:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIK-KRHFPKRTNSQD-AKGEKSTRDVIICYECKKAGHVKSKCLLLTG
        MTHEIIM+ ++E + KKKKS+ + + S E   E +++L+E ++ Y S+K+K  IK K+ F K  ++Q  +KGEKS +D +ICYECKK  H+++ C  L  
Subjt:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIK-KRHFPKRTNSQD-AKGEKSTRDVIICYECKKAGHVKSKCLLLTG

Query:  -----------------------KEVANICFMAFEDEDD--DDEICFENHSFDEFMDAYNEIKEEFEKL
                               +E AN+  M   D++D  DDE+  E  S +E  + +  ++ + EKL
Subjt:  -----------------------KEVANICFMAFEDEDD--DDEICFENHSFDEFMDAYNEIKEEFEKL

A0A5A7TZF4 Zf-CCHC domain-containing protein/UBN2 domain-containing protein9.2e-1541.67Show/hide
Query:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIK-KRHFPKRTNSQ-DAKGEKSTRDVIICYECKKAGHVKSKC-LLLT
        MTHEIIM  ++E + KKKKS+ +K+ S E   E +++L++ ++ YLS+K+K  IK K++F K  ++Q ++KGEKS +D +ICYECKK+ H+++ C LL +
Subjt:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIK-KRHFPKRTNSQ-DAKGEKSTRDVIICYECKKAGHVKSKC-LLLT

Query:  GKEVANICFMAFEDEDDDDE
         K+       A  D+  + E
Subjt:  GKEVANICFMAFEDEDDDDE

A0A5D3E1G2 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.2e-1440Show/hide
Query:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKR--TNSQDAKGEKSTRDVIICYECKKAGHVKSKC-LLLT
        MTHEIIM  ++E + KKKKS+ +K+ S E   E +++L++ ++ YLS+K+K  IKK+ + K+  +  +++KGEKS +D +ICYECKK+ H+++ C LL +
Subjt:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKR--TNSQDAKGEKSTRDVIICYECKKAGHVKSKC-LLLT

Query:  GKEVANICFMAFEDEDDDDE
         K+       A  D+  + E
Subjt:  GKEVANICFMAFEDEDDDDE

A0A6J1CR79 uncharacterized protein LOC1110135097.2e-4461.78Show/hide
Query:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHVKSKCLLL----
        MTHEI+MKGNME+DVKKKKSL +KSTSF+   ES+EELNE+ELAYLSKKFKKH KKRHFPK+TNSQDAKGEK+TRD+IICYECKKAGHV+S+C LL    
Subjt:  MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHVKSKCLLL----

Query:  ----------------------TGKEVANICFMAFEDEDDDDEICFENHSFDEFMDA
                              +G+EVAN+CFMAF DEDDD+E+C  +     ++D+
Subjt:  ----------------------TGKEVANICFMAFEDEDDDDEICFENHSFDEFMDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCATGAGATAATCATGAAAGGCAATATGGAAAAGGACGTCAAAAAGAAGAAAAGCTTAGTAGTAAAGTCTACATCCTTCGAAGGGACTTTTGAAAGTGATGAAGA
GCTAAACGAGAAAGAACTTGCCTACTTATCTAAGAAGTTCAAGAAGCATATCAAAAAGAGACACTTTCCAAAGAGAACCAACAGTCAAGATGCTAAAGGAGAAAAGAGCA
CCAGAGATGTCATCATCTGCTACGAGTGTAAAAAGGCTGGACATGTAAAATCTAAATGTCTTCTACTTACCGGAAAAGAAGTAGCTAATATTTGTTTCATGGCTTTTGAA
GATGAAGATGATGACGATGAGATATGTTTTGAAAATCATTCTTTTGATGAGTTTATGGATGCTTATAATGAGATTAAAGAAGAATTTGAAAAATTAGAATGTTTCGTGTC
CATGGATATACGACCATTAATGACGAGTCAATCCTTACGAGTGTTCGTAACTCAAGTTGGGTTAAATTCCATTTTACCCCAGAGTTACATCTTACTCCTTAAACACCACT
GCTCCTCTAATGAACAACCCGGTTATGGTCCAACCAATAACCGGAAGTCCCTCTCGGCCAATGAGAGGGTGGGGCCTCTTGTTCAAGTCCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGCATGAGATAATCATGAAAGGCAATATGGAAAAGGACGTCAAAAAGAAGAAAAGCTTAGTAGTAAAGTCTACATCCTTCGAAGGGACTTTTGAAAGTGATGAAGA
GCTAAACGAGAAAGAACTTGCCTACTTATCTAAGAAGTTCAAGAAGCATATCAAAAAGAGACACTTTCCAAAGAGAACCAACAGTCAAGATGCTAAAGGAGAAAAGAGCA
CCAGAGATGTCATCATCTGCTACGAGTGTAAAAAGGCTGGACATGTAAAATCTAAATGTCTTCTACTTACCGGAAAAGAAGTAGCTAATATTTGTTTCATGGCTTTTGAA
GATGAAGATGATGACGATGAGATATGTTTTGAAAATCATTCTTTTGATGAGTTTATGGATGCTTATAATGAGATTAAAGAAGAATTTGAAAAATTAGAATGTTTCGTGTC
CATGGATATACGACCATTAATGACGAGTCAATCCTTACGAGTGTTCGTAACTCAAGTTGGGTTAAATTCCATTTTACCCCAGAGTTACATCTTACTCCTTAAACACCACT
GCTCCTCTAATGAACAACCCGGTTATGGTCCAACCAATAACCGGAAGTCCCTCTCGGCCAATGAGAGGGTGGGGCCTCTTGTTCAAGTCCCGTAG
Protein sequenceShow/hide protein sequence
MTHEIIMKGNMEKDVKKKKSLVVKSTSFEGTFESDEELNEKELAYLSKKFKKHIKKRHFPKRTNSQDAKGEKSTRDVIICYECKKAGHVKSKCLLLTGKEVANICFMAFE
DEDDDDEICFENHSFDEFMDAYNEIKEEFEKLECFVSMDIRPLMTSQSLRVFVTQVGLNSILPQSYILLLKHHCSSNEQPGYGPTNNRKSLSANERVGPLVQVP