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Moc06g16190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g16190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:12740147..12741322
RNA-Seq ExpressionMoc06g16190
SyntenyMoc06g16190
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]1.4e-4737.75Show/hide
Query:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
        +ASAYETDLA+SV V ILDNPSIL+PD+ME++TP PSWMDPIVEFIK NPPQ+ K  K+M+RK ARF+LRDGALYRRGFSLPLLKCVT E+G YI++E+H
Subjt:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH

Query:  EGVHYN-----------------------------------------------------------TRVRPRSFQVGHLVLR-------------------
        EGV  N                                                           T  R  SF + ++V R                   
Subjt:  EGVHYN-----------------------------------------------------------TRVRPRSFQVGHLVLR-------------------

Query:  -----------------------------------------------------------------------------------------------KIQSH
                                                                                                       KIQSH
Subjt:  -----------------------------------------------------------------------------------------------KIQSH

Query:  VSTLDPSWEGPFEVKGIFLPRTYMLADLEGNVLVHPWNAEHLKHYYP
        V TLDPSWEGPFEVKGI    TYMLADLEGNVL HPWNAEHLK YYP
Subjt:  VSTLDPSWEGPFEVKGIFLPRTYMLADLEGNVLVHPWNAEHLKHYYP

XP_022150100.1 uncharacterized protein LOC111018362 [Momordica charantia]1.7e-4285.44Show/hide
Query:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
        +ASAYETDLA+SVPV+ILD+PSIL+PDVME+DTPSPSWMDPIVEFIKGNP Q+ KEQK+MAR+AARF LR+GALYRRGFSLPLLKCVT EEGLYILRE+H
Subjt:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH

Query:  EGV
        EGV
Subjt:  EGV

XP_022151715.1 uncharacterized protein LOC111019628 [Momordica charantia]1.3e-4592.23Show/hide
Query:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
        +ASAYETDLA+SVPV+ILDNPSILDPDVMEID PSPSWMDPIVEFI+GNPPQELKEQK+MARKAARFVLRDGALYRRGFSLPLLKCVT EEGLYILRE H
Subjt:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH

Query:  EGV
        EGV
Subjt:  EGV

XP_022152853.1 uncharacterized protein LOC111020478 [Momordica charantia]1.1e-49100Show/hide
Query:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
        MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
Subjt:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH

Query:  EGV
        EGV
Subjt:  EGV

XP_022158092.1 uncharacterized protein LOC111024661 [Momordica charantia]7.1e-4487.38Show/hide
Query:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
        +ASAYETDLA+SVPV+ILD+PSIL PDVMEIDTPSPSWMDPI+EFIKGNPPQ+ KEQKRMAR+AARF+LRDG LYRRGFSLPLLKCVT EEGLYILRE+H
Subjt:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH

Query:  EGV
        EGV
Subjt:  EGV

TrEMBL top hitse value%identityAlignment
A0A6J1CSJ1 Ribonuclease H6.7e-4837.75Show/hide
Query:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
        +ASAYETDLA+SV V ILDNPSIL+PD+ME++TP PSWMDPIVEFIK NPPQ+ K  K+M+RK ARF+LRDGALYRRGFSLPLLKCVT E+G YI++E+H
Subjt:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH

Query:  EGVHYN-----------------------------------------------------------TRVRPRSFQVGHLVLR-------------------
        EGV  N                                                           T  R  SF + ++V R                   
Subjt:  EGVHYN-----------------------------------------------------------TRVRPRSFQVGHLVLR-------------------

Query:  -----------------------------------------------------------------------------------------------KIQSH
                                                                                                       KIQSH
Subjt:  -----------------------------------------------------------------------------------------------KIQSH

Query:  VSTLDPSWEGPFEVKGIFLPRTYMLADLEGNVLVHPWNAEHLKHYYP
        V TLDPSWEGPFEVKGI    TYMLADLEGNVL HPWNAEHLK YYP
Subjt:  VSTLDPSWEGPFEVKGIFLPRTYMLADLEGNVLVHPWNAEHLKHYYP

A0A6J1D7J6 Ribonuclease H8.4e-4385.44Show/hide
Query:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
        +ASAYETDLA+SVPV+ILD+PSIL+PDVME+DTPSPSWMDPIVEFIKGNP Q+ KEQK+MAR+AARF LR+GALYRRGFSLPLLKCVT EEGLYILRE+H
Subjt:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH

Query:  EGV
        EGV
Subjt:  EGV

A0A6J1DBZ0 uncharacterized protein LOC1110196286.2e-4692.23Show/hide
Query:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
        +ASAYETDLA+SVPV+ILDNPSILDPDVMEID PSPSWMDPIVEFI+GNPPQELKEQK+MARKAARFVLRDGALYRRGFSLPLLKCVT EEGLYILRE H
Subjt:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH

Query:  EGV
        EGV
Subjt:  EGV

A0A6J1DG06 uncharacterized protein LOC1110204785.5e-50100Show/hide
Query:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
        MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
Subjt:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH

Query:  EGV
        EGV
Subjt:  EGV

A0A6J1DWA1 Ribonuclease H3.4e-4487.38Show/hide
Query:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH
        +ASAYETDLA+SVPV+ILD+PSIL PDVMEIDTPSPSWMDPI+EFIKGNPPQ+ KEQKRMAR+AARF+LRDG LYRRGFSLPLLKCVT EEGLYILRE+H
Subjt:  MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVH

Query:  EGV
        EGV
Subjt:  EGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAGCATATGAGACCGACCTGGCCAAGTCGGTCCCAGTCAAGATCTTAGACAATCCTTCAATCTTGGACCCAGACGTGATGGAGATTGACACTCCATCACCCTC
ATGGATGGATCCAATCGTGGAGTTCATCAAAGGAAATCCGCCGCAAGAACTGAAGGAGCAAAAGAGGATGGCACGGAAAGCAGCTCGGTTCGTACTCCGAGATGGAGCGT
TGTACCGACGTGGCTTCTCCCTGCCCCTGCTTAAGTGTGTAACTCTTGAAGAAGGCCTTTACATCCTTAGGGAAGTCCATGAAGGAGTACATTACAACACCCGAGTTCGA
CCTCGAAGCTTCCAAGTTGGACATTTAGTTTTAAGAAAGATTCAGAGTCATGTGAGCACTCTTGACCCGAGTTGGGAAGGACCATTCGAGGTTAAAGGCATATTCCTACC
TAGAACGTACATGCTGGCCGATCTGGAAGGAAATGTGCTTGTGCATCCATGGAATGCAGAGCATCTAAAGCACTATTACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAGCATATGAGACCGACCTGGCCAAGTCGGTCCCAGTCAAGATCTTAGACAATCCTTCAATCTTGGACCCAGACGTGATGGAGATTGACACTCCATCACCCTC
ATGGATGGATCCAATCGTGGAGTTCATCAAAGGAAATCCGCCGCAAGAACTGAAGGAGCAAAAGAGGATGGCACGGAAAGCAGCTCGGTTCGTACTCCGAGATGGAGCGT
TGTACCGACGTGGCTTCTCCCTGCCCCTGCTTAAGTGTGTAACTCTTGAAGAAGGCCTTTACATCCTTAGGGAAGTCCATGAAGGAGTACATTACAACACCCGAGTTCGA
CCTCGAAGCTTCCAAGTTGGACATTTAGTTTTAAGAAAGATTCAGAGTCATGTGAGCACTCTTGACCCGAGTTGGGAAGGACCATTCGAGGTTAAAGGCATATTCCTACC
TAGAACGTACATGCTGGCCGATCTGGAAGGAAATGTGCTTGTGCATCCATGGAATGCAGAGCATCTAAAGCACTATTACCCTTGA
Protein sequenceShow/hide protein sequence
MASAYETDLAKSVPVKILDNPSILDPDVMEIDTPSPSWMDPIVEFIKGNPPQELKEQKRMARKAARFVLRDGALYRRGFSLPLLKCVTLEEGLYILREVHEGVHYNTRVR
PRSFQVGHLVLRKIQSHVSTLDPSWEGPFEVKGIFLPRTYMLADLEGNVLVHPWNAEHLKHYYP