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Moc06g16480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g16480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr6:12977882..12978389
RNA-Seq ExpressionMoc06g16480
SyntenyMoc06g16480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW35907.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]5.5e-0539.32Show/hide
Query:  MKTVVSNSVGSRSLKFADICDIAITEEIRRKGSGKNYASTSGFEKNLESALVVQSKGKGKMEYGKRQQRHNQDSRFCKKFKEDQEKEDSANYLTVEVLLA
        M+  VSNS G   LK+ DI D+ + EEIRR+ +G+   + SG   NLE+   VQ    GK  + +RQ         CK  K+  E +DSAN +T EV LA
Subjt:  MKTVVSNSVGSRSLKFADICDIAITEEIRRKGSGKNYASTSGFEKNLESALVVQSKGKGKMEYGKRQQRHNQDSRFCKKFKEDQEKEDSANYLTVEVLLA

Query:  SGSCRVGIIMGSGQCSL
         GS    + +G  + SL
Subjt:  SGSCRVGIIMGSGQCSL
XP_022138046.1 kirola-like [Momordica charantia]2.9e-0653.33Show/hide
Query:  MKTVVSNSVGSRSLKFADICDIAITEEIRRKGSGKNYASTSGFEKNLESALVVQSKGKGKMEYGKRQQRHNQDSR
        MKT VSNS+G +SLKF++ICD AI EEIRRK SGK Y S  G      SAL V+ KGK K+    R+      SR
Subjt:  MKTVVSNSVGSRSLKFADICDIAITEEIRRKGSGKNYASTSGFEKNLESALVVQSKGKGKMEYGKRQQRHNQDSR
TrEMBL top hitse value%identityAlignment
A0A438DKB8 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-0539.32Show/hide
Query:  MKTVVSNSVGSRSLKFADICDIAITEEIRRKGSGKNYASTSGFEKNLESALVVQSKGKGKMEYGKRQQRHNQDSRFCKKFKEDQEKEDSANYLTVEVLLA
        M+  VSNS G   LK+ DI D+ + EEIRR+ +G+   + SG   NLE+   VQ    GK  + +RQ         CK  K+  E +DSAN +T EV LA
Subjt:  MKTVVSNSVGSRSLKFADICDIAITEEIRRKGSGKNYASTSGFEKNLESALVVQSKGKGKMEYGKRQQRHNQDSRFCKKFKEDQEKEDSANYLTVEVLLA

Query:  SGSCRVGIIMGSGQCSL
         GS    + +G  + SL
Subjt:  SGSCRVGIIMGSGQCSL
A0A6J1C8L4 kirola-like1.4e-0653.33Show/hide
Query:  MKTVVSNSVGSRSLKFADICDIAITEEIRRKGSGKNYASTSGFEKNLESALVVQSKGKGKMEYGKRQQRHNQDSR
        MKT VSNS+G +SLKF++ICD AI EEIRRK SGK Y S  G      SAL V+ KGK K+    R+      SR
Subjt:  MKTVVSNSVGSRSLKFADICDIAITEEIRRKGSGKNYASTSGFEKNLESALVVQSKGKGKMEYGKRQQRHNQDSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACGGTTGTATCAAATTCAGTGGGTAGCAGGAGTCTAAAATTCGCAGATATTTGTGACATTGCAATAACTGAAGAGATTCGCAGGAAAGGAAGTGGAAAAAATTA
TGCTTCTACTTCTGGGTTTGAAAAAAATTTGGAATCAGCCTTGGTAGTTCAGAGCAAAGGAAAAGGGAAAATGGAATATGGGAAAAGACAACAAAGGCACAATCAGGACA
GTAGATTTTGCAAGAAATTCAAGGAGGATCAAGAAAAGGAAGATTCTGCAAATTATTTGACAGTAGAGGTGTTGCTAGCTAGTGGCAGCTGCAGAGTAGGCATCATAATG
GGCAGTGGACAATGCAGCCTTAGTGCACGTTGCTTCAGGCAGACAGTTGTTTACATCTTTCACTACAAGGAGCTTTCCCGTGGTGAGAATGGGAAACAACATATTCTCCA
AGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGACGGTTGTATCAAATTCAGTGGGTAGCAGGAGTCTAAAATTCGCAGATATTTGTGACATTGCAATAACTGAAGAGATTCGCAGGAAAGGAAGTGGAAAAAATTA
TGCTTCTACTTCTGGGTTTGAAAAAAATTTGGAATCAGCCTTGGTAGTTCAGAGCAAAGGAAAAGGGAAAATGGAATATGGGAAAAGACAACAAAGGCACAATCAGGACA
GTAGATTTTGCAAGAAATTCAAGGAGGATCAAGAAAAGGAAGATTCTGCAAATTATTTGACAGTAGAGGTGTTGCTAGCTAGTGGCAGCTGCAGAGTAGGCATCATAATG
GGCAGTGGACAATGCAGCCTTAGTGCACGTTGCTTCAGGCAGACAGTTGTTTACATCTTTCACTACAAGGAGCTTTCCCGTGGTGAGAATGGGAAACAACATATTCTCCA
AGATTAG
Protein sequenceShow/hide protein sequence
MKTVVSNSVGSRSLKFADICDIAITEEIRRKGSGKNYASTSGFEKNLESALVVQSKGKGKMEYGKRQQRHNQDSRFCKKFKEDQEKEDSANYLTVEVLLASGSCRVGIIM
GSGQCSLSARCFRQTVVYIFHYKELSRGENGKQHILQD