; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g16640 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g16640
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr6:13082015..13083960
RNA-Seq ExpressionMoc06g16640
SyntenyMoc06g16640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2341.18Show/hide
Query:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------
        L EE PQ P  NA R  R  Y +W KAN+KA+ YILAS+S VLAKKHE+M+TAREIMDSL +MFGQ                                  
Subjt:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------

Query:  --------VVIDEGSQ---------------------------------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKK
                 VIDE SQ                                       SLMK KGQ+G+ANV TS ++FHRGST GTKS+ SSS +K +KKKK
Subjt:  --------VVIDEGSQ---------------------------------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKK

Query:  NSGKGVKADPTATAATKKGKA
          G+G KA+  A   TKK KA
Subjt:  NSGKGVKADPTATAATKKGKA

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2341.18Show/hide
Query:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------
        L EE PQ P  NA R  R  Y +W KAN+KA+ YILAS+S VLAKKHE+M+TAREIMDSL +MFGQ                                  
Subjt:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------

Query:  --------VVIDEGSQ---------------------------------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKK
                 VIDE SQ                                       SLMK KGQ+G+ANV TS ++FHRGST GTKS+ SSS +K +KKKK
Subjt:  --------VVIDEGSQ---------------------------------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKK

Query:  NSGKGVKADPTATAATKKGKA
          G+G KA+  A   TKK KA
Subjt:  NSGKGVKADPTATAATKKGKA

KAA0055498.1 gag-pol fusion protein [Cucumis melo var. makuwa]1.2e-2447.51Show/hide
Query:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFG-QFVVIDEGSQ------------------------
        L EE PQ PT NA R  R  Y +W KAN+KA+ YIL S+S VLAKKHE+++TAREIMDSL +MF     VIDE SQ                        
Subjt:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFG-QFVVIDEGSQ------------------------

Query:  ---------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKA
                       SLMK KGQ+G+ NV TS ++FHR ST GTKS+ SSS +K + KKKN G+G KA+  A   TKK KA
Subjt:  ---------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKA

KAA0060254.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2345.6Show/hide
Query:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------
        L EE PQ P  NA +  R  Y +W K N+K + YILAS+S VLAKKHE+M+TAREIMDSL +MFGQ                                  
Subjt:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------

Query:  --------VVIDEGSQSLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKA
                 VIDE SQ      GQ+G+ANV TS ++FHRGST GTKS+ SSS +K +KKKK  G+G KA+  A   TKK KA
Subjt:  --------VVIDEGSQSLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKA

TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2345.6Show/hide
Query:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------
        L EE PQ P  NA +  R  Y +W K N+K + YILAS+S VLAKKHE+M+TAREIMDSL +MFGQ                                  
Subjt:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------

Query:  --------VVIDEGSQSLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKA
                 VIDE SQ      GQ+G+ANV TS ++FHRGST GTKS+ SSS +K +KKKK  G+G KA+  A   TKK KA
Subjt:  --------VVIDEGSQSLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKA

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.4e-2341.18Show/hide
Query:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------
        L EE PQ P  NA R  R  Y +W KAN+KA+ YILAS+S VLAKKHE+M+TAREIMDSL +MFGQ                                  
Subjt:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------

Query:  --------VVIDEGSQ---------------------------------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKK
                 VIDE SQ                                       SLMK KGQ+G+ANV TS ++FHRGST GTKS+ SSS +K +KKKK
Subjt:  --------VVIDEGSQ---------------------------------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKK

Query:  NSGKGVKADPTATAATKKGKA
          G+G KA+  A   TKK KA
Subjt:  NSGKGVKADPTATAATKKGKA

A0A5A7TU93 Gag/pol protein1.4e-2341.18Show/hide
Query:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------
        L EE PQ P  NA R  R  Y +W KAN+KA+ YILAS+S VLAKKHE+M+TAREIMDSL +MFGQ                                  
Subjt:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------

Query:  --------VVIDEGSQ---------------------------------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKK
                 VIDE SQ                                       SLMK KGQ+G+ANV TS ++FHRGST GTKS+ SSS +K +KKKK
Subjt:  --------VVIDEGSQ---------------------------------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKK

Query:  NSGKGVKADPTATAATKKGKA
          G+G KA+  A   TKK KA
Subjt:  NSGKGVKADPTATAATKKGKA

A0A5A7TWB9 Gag/pol protein1.4e-2341.18Show/hide
Query:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------
        L EE PQ P  NA R  R  Y +W KAN+KA+ YILAS+S VLAKKHE+M+TAREIMDSL +MFGQ                                  
Subjt:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------

Query:  --------VVIDEGSQ---------------------------------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKK
                 VIDE SQ                                       SLMK KGQ+G+ANV TS ++FHRGST GTKS+ SSS +K +KKKK
Subjt:  --------VVIDEGSQ---------------------------------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKK

Query:  NSGKGVKADPTATAATKKGKA
          G+G KA+  A   TKK KA
Subjt:  NSGKGVKADPTATAATKKGKA

A0A5A7UKD1 Gag-pol fusion protein5.9e-2547.51Show/hide
Query:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFG-QFVVIDEGSQ------------------------
        L EE PQ PT NA R  R  Y +W KAN+KA+ YIL S+S VLAKKHE+++TAREIMDSL +MF     VIDE SQ                        
Subjt:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFG-QFVVIDEGSQ------------------------

Query:  ---------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKA
                       SLMK KGQ+G+ NV TS ++FHR ST GTKS+ SSS +K + KKKN G+G KA+  A   TKK KA
Subjt:  ---------------SLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKA

A0A5A7UYX7 Gag/pol protein1.4e-2345.6Show/hide
Query:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------
        L EE PQ P  NA +  R  Y +W K N+K + YILAS+S VLAKKHE+M+TAREIMDSL +MFGQ                                  
Subjt:  LTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQF---------------------------------

Query:  --------VVIDEGSQSLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKA
                 VIDE SQ      GQ+G+ANV TS ++FHRGST GTKS+ SSS +K +KKKK  G+G KA+  A   TKK KA
Subjt:  --------VVIDEGSQSLMKNKGQEGDANVVTS-KRFHRGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAGGGGGAGAGTAGAGTTCAGGGTTTAGGTTCGTCTTTAACTGAGGAGTATCCTCAGGCCCCCACGCCTAATGCAGCCCGAGCCAGTCGGGGTGCCTATAACAA
ATGGATCAAGGCTAATGACAAGGCCAAGGTCTACATCTTGGCAAGCATATCTGCTGTGTTGGCCAAGAAGCATGAGAACATGGTCACTGCAAGGGAGATTATGGACTCAT
TGTGGGACATGTTTGGACAGTTCGTTGTCATAGACGAGGGGAGCCAGTCGCTTATGAAAAATAAGGGACAGGAAGGAGATGCAAACGTTGTCACCTCAAAACGATTCCAT
CGAGGTTCGACCTTAGGAACCAAATCTGTACTTTCTTCTTCTAGAAGTAAGCCTTTCAAGAAGAAGAAGAACAGTGGTAAAGGGGTGAAAGCTGACCCTACTGCTACTGC
TGCTACCAAGAAGGGCAAGGCCAAAGTTGCAGACAAAAGGAAAATGTTTCCACTGCAACCTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAGGGGGAGAGTAGAGTTCAGGGTTTAGGTTCGTCTTTAACTGAGGAGTATCCTCAGGCCCCCACGCCTAATGCAGCCCGAGCCAGTCGGGGTGCCTATAACAA
ATGGATCAAGGCTAATGACAAGGCCAAGGTCTACATCTTGGCAAGCATATCTGCTGTGTTGGCCAAGAAGCATGAGAACATGGTCACTGCAAGGGAGATTATGGACTCAT
TGTGGGACATGTTTGGACAGTTCGTTGTCATAGACGAGGGGAGCCAGTCGCTTATGAAAAATAAGGGACAGGAAGGAGATGCAAACGTTGTCACCTCAAAACGATTCCAT
CGAGGTTCGACCTTAGGAACCAAATCTGTACTTTCTTCTTCTAGAAGTAAGCCTTTCAAGAAGAAGAAGAACAGTGGTAAAGGGGTGAAAGCTGACCCTACTGCTACTGC
TGCTACCAAGAAGGGCAAGGCCAAAGTTGCAGACAAAAGGAAAATGTTTCCACTGCAACCTGGATGA
Protein sequenceShow/hide protein sequence
MREGESRVQGLGSSLTEEYPQAPTPNAARASRGAYNKWIKANDKAKVYILASISAVLAKKHENMVTAREIMDSLWDMFGQFVVIDEGSQSLMKNKGQEGDANVVTSKRFH
RGSTLGTKSVLSSSRSKPFKKKKNSGKGVKADPTATAATKKGKAKVADKRKMFPLQPG