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Moc06g16930 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g16930
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr6:13308880..13312401
RNA-Seq ExpressionMoc06g16930
SyntenyMoc06g16930
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147768.1 uncharacterized protein LOC111016623 [Momordica charantia]4.1e-6470Show/hide
Query:  KHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTNIAESMNDVLVHERALPVTA
        +HV+CMHH+K+NLNDKFK   E ++ LY+QAA+AFKKSTF+YYWNQLAGFP+V +YL+++ FDKW+RAYQP L YNQMTTNIAESMN VLVH RALPVTA
Subjt:  KHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTNIAESMNDVLVHERALPVTA

Query:  LLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS
        LLE+CR LLQRWFYERRT+A+T ++ LT+YA +IL+++ EQA+RH I+ IDN+E+E+H  S KVRVNLNS
Subjt:  LLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]5.8e-5859.79Show/hide
Query:  LTEVHTDSTNALCCL-LDEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN
        +++ H   TN++  + LD  HVTCMHHV + L +KF  R   + R++ +AAKAFK S F+YYW QLAGFP VHKYLEDI  DKWAR YQP + YNQMT+N
Subjt:  LTEVHTDSTNALCCL-LDEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN

Query:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS
        +AESMN VLVH R LP+TAL E+CR+LLQ+WFY+RRT  S+R T LT+YA NILKE  EQA+ H ++ ID FE+E+H  + KVRVN+NS
Subjt:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]5.5e-0846.97Show/hide
Query:  GTWNESQSVYEGGIIEGLDVDNSITYDELISAMFMLTRIDRDQFNILIRCVGHYVPSVHLNYTLPN
        G WNE+ +VYEGG++ GL+VD  ITY +L+SA+F +TRI+ D FNI+++C+  +       Y +PN
Subjt:  GTWNESQSVYEGGIIEGLDVDNSITYDELISAMFMLTRIDRDQFNILIRCVGHYVPSVHLNYTLPN

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]9.2e-5658.2Show/hide
Query:  LTEVHTDSTNALCCLL-DEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN
        +++ H   TN++  +  D  HVTCMHH+ + LN+KF  R E ++ ++ +AAKAFK S F+YYW QLAGFP V KYLEDI FDKWARAYQP + YNQMT+N
Subjt:  LTEVHTDSTNALCCLL-DEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN

Query:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS
        +AESMN VLVH R LP+TA+ E+CRALLQ+WFYERRT A +  T+LT+YA  ILK+  E+A+ H ++ ID FE+E+H  + KV VNLNS
Subjt:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS

XP_022154924.1 uncharacterized protein LOC111022069 [Momordica charantia]4.0e-6767.72Show/hide
Query:  LTEVHTDSTNALCCLL-DEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN
        +++ H  S N++  +    KH++CMHH+++NLNDKFK R+E VE LY+ AAKAFKKSTF+YYWNQLAGFP+V KYLE++ FDKW+RAYQP L YNQMTTN
Subjt:  LTEVHTDSTNALCCLL-DEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN

Query:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS
        IA+SMN VLVH R LP+TALLEHCR LLQR FYERR YASTR++ILTDYA  I+K AVEQ +RH I+ IDN+EY++H  S KVRVNLNS
Subjt:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS

XP_022155156.1 uncharacterized protein LOC111022299 [Momordica charantia]1.5e-6173.12Show/hide
Query:  INLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTNIAESMNDVLVHERALPVTALLEHCRALLQ
        +NLNDKFK R+E VE LY+ AAKAFKKSTF+YYWNQLAGFP++ +YLE++ FDKW+RAYQPRL YNQ TTNIAESMN VLVH R LPVT LLEHC ALLQ
Subjt:  INLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTNIAESMNDVLVHERALPVTALLEHCRALLQ

Query:  RWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS
        RW+YE+RTYASTR++ILTDY   I+K AVEQA++H I+ IDN+EYE+H  + KVRVNLNS
Subjt:  RWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS

TrEMBL top hitse value%identityAlignment
A0A6J1D278 uncharacterized protein LOC1110166232.0e-6470Show/hide
Query:  KHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTNIAESMNDVLVHERALPVTA
        +HV+CMHH+K+NLNDKFK   E ++ LY+QAA+AFKKSTF+YYWNQLAGFP+V +YL+++ FDKW+RAYQP L YNQMTTNIAESMN VLVH RALPVTA
Subjt:  KHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTNIAESMNDVLVHERALPVTA

Query:  LLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS
        LLE+CR LLQRWFYERRT+A+T ++ LT+YA +IL+++ EQA+RH I+ IDN+E+E+H  S KVRVNLNS
Subjt:  LLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS

A0A6J1DLB0 uncharacterized protein LOC1110219692.8e-5859.79Show/hide
Query:  LTEVHTDSTNALCCL-LDEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN
        +++ H   TN++  + LD  HVTCMHHV + L +KF  R   + R++ +AAKAFK S F+YYW QLAGFP VHKYLEDI  DKWAR YQP + YNQMT+N
Subjt:  LTEVHTDSTNALCCL-LDEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN

Query:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS
        +AESMN VLVH R LP+TAL E+CR+LLQ+WFY+RRT  S+R T LT+YA NILKE  EQA+ H ++ ID FE+E+H  + KVRVN+NS
Subjt:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS

A0A6J1DLB0 uncharacterized protein LOC1110219692.6e-0846.97Show/hide
Query:  GTWNESQSVYEGGIIEGLDVDNSITYDELISAMFMLTRIDRDQFNILIRCVGHYVPSVHLNYTLPN
        G WNE+ +VYEGG++ GL+VD  ITY +L+SA+F +TRI+ D FNI+++C+  +       Y +PN
Subjt:  GTWNESQSVYEGGIIEGLDVDNSITYDELISAMFMLTRIDRDQFNILIRCVGHYVPSVHLNYTLPN

A0A6J1DLB0 uncharacterized protein LOC1110219694.5e-5658.2Show/hide
Query:  LTEVHTDSTNALCCLL-DEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN
        +++ H   TN++  +  D  HVTCMHH+ + LN+KF  R E ++ ++ +AAKAFK S F+YYW QLAGFP V KYLEDI FDKWARAYQP + YNQMT+N
Subjt:  LTEVHTDSTNALCCLL-DEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN

Query:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS
        +AESMN VLVH R LP+TA+ E+CRALLQ+WFYERRT A +  T+LT+YA  ILK+  E+A+ H ++ ID FE+E+H  + KV VNLNS
Subjt:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS

A0A6J1DNQ2 uncharacterized protein LOC1110220691.9e-6767.72Show/hide
Query:  LTEVHTDSTNALCCLL-DEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN
        +++ H  S N++  +    KH++CMHH+++NLNDKFK R+E VE LY+ AAKAFKKSTF+YYWNQLAGFP+V KYLE++ FDKW+RAYQP L YNQMTTN
Subjt:  LTEVHTDSTNALCCLL-DEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTN

Query:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS
        IA+SMN VLVH R LP+TALLEHCR LLQR FYERR YASTR++ILTDYA  I+K AVEQ +RH I+ IDN+EY++H  S KVRVNLNS
Subjt:  IAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS

A0A6J1DQV1 uncharacterized protein LOC1110222997.1e-6273.12Show/hide
Query:  INLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTNIAESMNDVLVHERALPVTALLEHCRALLQ
        +NLNDKFK R+E VE LY+ AAKAFKKSTF+YYWNQLAGFP++ +YLE++ FDKW+RAYQPRL YNQ TTNIAESMN VLVH R LPVT LLEHC ALLQ
Subjt:  INLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVHKYLEDIRFDKWARAYQPRLGYNQMTTNIAESMNDVLVHERALPVTALLEHCRALLQ

Query:  RWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS
        RW+YE+RTYASTR++ILTDY   I+K AVEQA++H I+ IDN+EYE+H  + KVRVNLNS
Subjt:  RWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHGASCKVRVNLNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTCTCTTTGTTGGTTATGGTGGTACGTGGAATGAGTCTCAATCTGTATACGAAGGTGGGATTATTGAAGGTTTAGATGTGGACAATAGTATAACGTAC
GATGAGCTCATAAGTGCCATGTTCATGCTTACCAGAATTGACCGAGACCAGTTCAACATCTTGATACGTTGTGTAGGGCATTATGTGCCATCAGTTCATTTGAAT
TACACACTCCCTAATGCTGGTCCATCATGTAACCTAGATGATGATGAAACAAACTATTGCGGTCAGTGGGACGACAATGATGACAATCACATGGAGTATGAAGGT
AGGGATGATGAGAACCACGATAATGAGTTCAAGAACGATGCTGATGTTGAGAACGAGCAAGTAGAGCCCGAGGATGTAGCCACTCCGTCTTTGGACCCCTTGACC
GAAGTGCACACGGATAGTACGAATGCACTCTGCTGTCTTCTCGACGAGAAACACGTTACATGCATGCATCATGTAAAGATAAACTTGAACGATAAGTTCAAGTGT
AGGACCGAGGATGTGGAGAGGTTGTACATTCAAGCAGCTAAGGCGTTCAAGAAGTCTACGTTCAAGTATTATTGGAACCAACTTGCAGGATTCCCAAAAGTGCAT
AAGTATCTAGAGGACATCCGGTTCGACAAATGGGCACGTGCATATCAACCTAGACTGGGGTACAACCAAATGACGACTAACATTGCGGAGTCCATGAATGATGTA
CTTGTGCATGAACGGGCATTGCCAGTCACCGCACTGTTAGAACATTGTAGGGCTCTTCTACAACGATGGTTTTACGAGCGACGGACATACGCATCCACAAGATCG
ACCATTCTGACTGACTATGCTGGAAATATTCTTAAGGAAGCTGTGGAGCAGGCCCAACGACATCTCATTAAACTTATTGACAATTTTGAATACGAGATACACGGC
GCTAGTTGTAAAGTGCGTGTCAACCTGAACAGTGTGAACGGGATCGACCGCGGTGATGATGTGGAGAGGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGTCTCTTTGTTGGTTATGGTGGTACGTGGAATGAGTCTCAATCTGTATACGAAGGTGGGATTATTGAAGGTTTAGATGTGGACAATAGTATAACGTAC
GATGAGCTCATAAGTGCCATGTTCATGCTTACCAGAATTGACCGAGACCAGTTCAACATCTTGATACGTTGTGTAGGGCATTATGTGCCATCAGTTCATTTGAAT
TACACACTCCCTAATGCTGGTCCATCATGTAACCTAGATGATGATGAAACAAACTATTGCGGTCAGTGGGACGACAATGATGACAATCACATGGAGTATGAAGGT
AGGGATGATGAGAACCACGATAATGAGTTCAAGAACGATGCTGATGTTGAGAACGAGCAAGTAGAGCCCGAGGATGTAGCCACTCCGTCTTTGGACCCCTTGACC
GAAGTGCACACGGATAGTACGAATGCACTCTGCTGTCTTCTCGACGAGAAACACGTTACATGCATGCATCATGTAAAGATAAACTTGAACGATAAGTTCAAGTGT
AGGACCGAGGATGTGGAGAGGTTGTACATTCAAGCAGCTAAGGCGTTCAAGAAGTCTACGTTCAAGTATTATTGGAACCAACTTGCAGGATTCCCAAAAGTGCAT
AAGTATCTAGAGGACATCCGGTTCGACAAATGGGCACGTGCATATCAACCTAGACTGGGGTACAACCAAATGACGACTAACATTGCGGAGTCCATGAATGATGTA
CTTGTGCATGAACGGGCATTGCCAGTCACCGCACTGTTAGAACATTGTAGGGCTCTTCTACAACGATGGTTTTACGAGCGACGGACATACGCATCCACAAGATCG
ACCATTCTGACTGACTATGCTGGAAATATTCTTAAGGAAGCTGTGGAGCAGGCCCAACGACATCTCATTAAACTTATTGACAATTTTGAATACGAGATACACGGC
GCTAGTTGTAAAGTGCGTGTCAACCTGAACAGTGTGAACGGGATCGACCGCGGTGATGATGTGGAGAGGGCTTGA
Protein sequenceShow/hide protein sequence
MPRLFVGYGGTWNESQSVYEGGIIEGLDVDNSITYDELISAMFMLTRIDRDQFNILIRCVGHYVPSVHLNYTLPNAGPSCNLDDDETNYCGQWDDNDDNHMEYEG
RDDENHDNEFKNDADVENEQVEPEDVATPSLDPLTEVHTDSTNALCCLLDEKHVTCMHHVKINLNDKFKCRTEDVERLYIQAAKAFKKSTFKYYWNQLAGFPKVH
KYLEDIRFDKWARAYQPRLGYNQMTTNIAESMNDVLVHERALPVTALLEHCRALLQRWFYERRTYASTRSTILTDYAGNILKEAVEQAQRHLIKLIDNFEYEIHG
ASCKVRVNLNSVNGIDRGDDVERA