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Moc06g17200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g17200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr6:13457849..13459995
RNA-Seq ExpressionMoc06g17200
SyntenyMoc06g17200
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]2.1e-1468.12Show/hide
Query:  VNGVTSKDW-----LFRVIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA
        +NG   K W        VIDDL+  LQED PQA APNATVAVR  YDRWIKANDK  VYILASISDVLA
Subjt:  VNGVTSKDW-----LFRVIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA

XP_022154837.1 uncharacterized protein LOC111022000 [Momordica charantia]9.4e-1582.69Show/hide
Query:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA
        +IDDLR  LQED PQAPAPNAT+AVRN YDRWIKANDK  VYIL+SISDVLA
Subjt:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA

XP_022157449.1 uncharacterized protein LOC111024145 [Momordica charantia]3.7e-1171.15Show/hide
Query:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA
        V+DDLR  L E+ PQAP PNA  A R+ YDRWIKANDK NVYIL SISDVL+
Subjt:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]1.2e-1484.62Show/hide
Query:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA
        +IDDLR  LQED PQAPAPNATVAVRN+YDRWIKANDK  V ILASISDVLA
Subjt:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]1.2e-1466.67Show/hide
Query:  VNGVTSKDW-----LFRVIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA
        +NG   + W        VIDDLR  LQED PQAP  NATVAVRN YDRWIK+NDK  VYILASISDVLA
Subjt:  VNGVTSKDW-----LFRVIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA

TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200951.0e-1468.12Show/hide
Query:  VNGVTSKDW-----LFRVIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA
        +NG   K W        VIDDL+  LQED PQA APNATVAVR  YDRWIKANDK  VYILASISDVLA
Subjt:  VNGVTSKDW-----LFRVIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA

A0A6J1DMS3 uncharacterized protein LOC1110220004.6e-1582.69Show/hide
Query:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA
        +IDDLR  LQED PQAPAPNAT+AVRN YDRWIKANDK  VYIL+SISDVLA
Subjt:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA

A0A6J1DW68 uncharacterized protein LOC1110246376.0e-1584.62Show/hide
Query:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA
        +IDDLR  LQED PQAPAPNATVAVRN+YDRWIKANDK  V ILASISDVLA
Subjt:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA

A0A6J1DWI4 uncharacterized protein LOC1110241451.8e-1171.15Show/hide
Query:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA
        V+DDLR  L E+ PQAP PNA  A R+ YDRWIKANDK NVYIL SISDVL+
Subjt:  VIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA

A0A6J1DWL0 uncharacterized protein LOC1110247346.0e-1566.67Show/hide
Query:  VNGVTSKDW-----LFRVIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA
        +NG   + W        VIDDLR  LQED PQAP  NATVAVRN YDRWIK+NDK  VYILASISDVLA
Subjt:  VNGVTSKDW-----LFRVIDDLRLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCCGGAGTCAGCATTTAAGGGAACTCTCATCTATTTCCCTAAAGTCGGAAAGGAGTGAATTCCATCTTGTGAAGTTATGTTC
CCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATATTGAGTCGGCATCTAGGGTCACTCTCACCCATACAGATCAAAGGACGAGCCCTCACGGGCAGGAGTCCA
TAACTCACTTAGGATTGAGAATGAGTTGTCTGGTCATCCTAAGAAACAACAATCTATTAGTTAACGGTGTTACATCTAAAGATTGGCTATTTCGTGTGATAGATGATCTT
AGGCTCGCCTTGCAAGAGGATTCTCCTCAAGCTCCTGCGCCTAACGCCACTGTGGCGGTGCGCAACGTCTATGATAGATGGATCAAGGCCAATGACAAGGTCAACGTCTA
CATCTTGGCGAGCATATCTGATGTGCTTGCTGACTGGGTGTTTATGCTGAACGCACGCACTAAGCGTGGTAACAATTATATAGATGCAAGCGCACACCTGTCAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCCGGAGTCAGCATTTAAGGGAACTCTCATCTATTTCCCTAAAGTCGGAAAGGAGTGAATTCCATCTTGTGAAGTTATGTTC
CCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATATTGAGTCGGCATCTAGGGTCACTCTCACCCATACAGATCAAAGGACGAGCCCTCACGGGCAGGAGTCCA
TAACTCACTTAGGATTGAGAATGAGTTGTCTGGTCATCCTAAGAAACAACAATCTATTAGTTAACGGTGTTACATCTAAAGATTGGCTATTTCGTGTGATAGATGATCTT
AGGCTCGCCTTGCAAGAGGATTCTCCTCAAGCTCCTGCGCCTAACGCCACTGTGGCGGTGCGCAACGTCTATGATAGATGGATCAAGGCCAATGACAAGGTCAACGTCTA
CATCTTGGCGAGCATATCTGATGTGCTTGCTGACTGGGTGTTTATGCTGAACGCACGCACTAAGCGTGGTAACAATTATATAGATGCAAGCGCACACCTGTCAGAGTAA
Protein sequenceShow/hide protein sequence
MRGWGPLFKSRSQHLRELSSISLKSERSEFHLVKLCSQLPTRSRPQNGRNIESASRVTLTHTDQRTSPHGQESITHLGLRMSCLVILRNNNLLVNGVTSKDWLFRVIDDL
RLALQEDSPQAPAPNATVAVRNVYDRWIKANDKVNVYILASISDVLADWVFMLNARTKRGNNYIDASAHLSE