; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g17510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g17510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionnucleolar protein 58-like
Genome locationchr6:13722857..13723425
RNA-Seq ExpressionMoc06g17510
SyntenyMoc06g17510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]6.0e-0836.73Show/hide
Query:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPT
        +PTTH  +V+K+ + LL  +L  + I+VG++IH EI  CAA+++  LFFP+LIT+L        + NEE L +   ID   +     + PT     P+
Subjt:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPT

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.8e-0831.78Show/hide
Query:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPT--
        +PTTH  +V+K+ + LL  +L  + I+VG++IH EI  CAA+++  LFFP+LIT+L        + NEE L +   ID   +     + PT     P+  
Subjt:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPT--

Query:  --------RAINEMIAQFAKLRKQLTPLE
                R   +++ Q   L ++L+  E
Subjt:  --------RAINEMIAQFAKLRKQLTPLE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]7.8e-0833.33Show/hide
Query:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTM-------ECHMLQDPTRR
        +PTTH  +V+K+ + LL  +L  + I+VG++IH EI  CAA++S  LFFP+LIT+L        + NEE L     ID   +       +  + Q P+  
Subjt:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTM-------ECHMLQDPTRR

Query:  G---AMPTRAINEMIAQFAKLRKQLTPLE
            A  +RA  +++ Q   L ++L+  E
Subjt:  G---AMPTRAINEMIAQFAKLRKQLTPLE

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.7e-0734.44Show/hide
Query:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPTRA
        +PTTH  +V+K  V LL  +L  + I+VGQ+IH+EI   AA++S  LFFP+LIT++        + NEE L +   ID   +                  
Subjt:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPTRA

Query:  INEMIAQFAKLRKQLTPLEHLKAAAPSTSTTPP-ASLKMLEQSCSSEEEYQ
            IAQ         P     AAA S+ST+     LK LEQ  S +E  Q
Subjt:  INEMIAQFAKLRKQLTPLEHLKAAAPSTSTTPP-ASLKMLEQSCSSEEEYQ

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]5.1e-0731.97Show/hide
Query:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQ---DPTRRGAMP
        +PTTH   V+K  V LL  +L  + I+VG++IH+EI  CAA++   LFFP+LIT++        + NEE L +   ID   +     +   +P+ R +  
Subjt:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQ---DPTRRGAMP

Query:  TRAINEMIAQFAKLRKQLTPLE
          ++    +  ++  +QL  LE
Subjt:  TRAINEMIAQFAKLRKQLTPLE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.9e-0836.73Show/hide
Query:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPT
        +PTTH  +V+K+ + LL  +L  + I+VG++IH EI  CAA+++  LFFP+LIT+L        + NEE L +   ID   +     + PT     P+
Subjt:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPT

A0A2P5BCG4 Uncharacterized protein (Fragment)3.8e-0831.78Show/hide
Query:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPT--
        +PTTH  +V+K+ + LL  +L  + I+VG++IH EI  CAA+++  LFFP+LIT+L        + NEE L +   ID   +     + PT     P+  
Subjt:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPT--

Query:  --------RAINEMIAQFAKLRKQLTPLE
                R   +++ Q   L ++L+  E
Subjt:  --------RAINEMIAQFAKLRKQLTPLE

A0A2P5CEY2 Uncharacterized protein3.8e-0833.33Show/hide
Query:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTM-------ECHMLQDPTRR
        +PTTH  +V+K+ + LL  +L  + I+VG++IH EI  CAA++S  LFFP+LIT+L        + NEE L     ID   +       +  + Q P+  
Subjt:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTM-------ECHMLQDPTRR

Query:  G---AMPTRAINEMIAQFAKLRKQLTPLE
            A  +RA  +++ Q   L ++L+  E
Subjt:  G---AMPTRAINEMIAQFAKLRKQLTPLE

A0A2P5CPE8 Uncharacterized protein8.5e-0834.44Show/hide
Query:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPTRA
        +PTTH  +V+K  V LL  +L  + I+VGQ+IH+EI   AA++S  LFFP+LIT++        + NEE L +   ID   +                  
Subjt:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPTRA

Query:  INEMIAQFAKLRKQLTPLEHLKAAAPSTSTTPP-ASLKMLEQSCSSEEEYQ
            IAQ         P     AAA S+ST+     LK LEQ  S +E  Q
Subjt:  INEMIAQFAKLRKQLTPLEHLKAAAPSTSTTPP-ASLKMLEQSCSSEEEYQ

A0A2P5CXU3 Uncharacterized protein (Fragment)2.5e-0731.97Show/hide
Query:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQ---DPTRRGAMP
        +PTTH   V+K  V LL  +L  + I+VG++IH+EI  CAA++   LFFP+LIT++        + NEE L +   ID   +     +   +P+ R +  
Subjt:  MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQ---DPTRRGAMP

Query:  TRAINEMIAQFAKLRKQLTPLE
          ++    +  ++  +QL  LE
Subjt:  TRAINEMIAQFAKLRKQLTPLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGACAACGCATGATAATTCTGTTACAAAGAATATGGTCTTTCTGTTGGCTTGTATCCTAGAGAAGCGCTTTATTGACGTTGGCCAGCTCATCCACAAGGAG
ATCACCCATTGTGCAGCAAAGCGATCTAGCCGCCTATTCTTCCCCAACCTCATCACCAAGCTCTACCTCCGCAGAGATGTCTCCGTCGTTGACAATGAAGAGCCC
CTGAAAGATAAGTCGGTGATAGACAAATGTACGATGGAGTGTCATATGCTTCAAGACCCTACTCGCCGTGGAGCAATGCCTACAAGGGCCATCAATGAAATGATA
GCCCAATTCGCAAAGCTCCGGAAGCAGCTTACGCCGTTGGAGCATTTAAAAGCGGCGGCACCGTCTACATCTACTACTCCCCCTGCTAGCTTGAAGATGCTGGAG
CAATCTTGCAGCTCTGAAGAGGAATATCAGCCCACGGGCGACTCTTCAGAGGAAGAAGAGAGCTTAGAAGGAAGCTCGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGACAACGCATGATAATTCTGTTACAAAGAATATGGTCTTTCTGTTGGCTTGTATCCTAGAGAAGCGCTTTATTGACGTTGGCCAGCTCATCCACAAGGAG
ATCACCCATTGTGCAGCAAAGCGATCTAGCCGCCTATTCTTCCCCAACCTCATCACCAAGCTCTACCTCCGCAGAGATGTCTCCGTCGTTGACAATGAAGAGCCC
CTGAAAGATAAGTCGGTGATAGACAAATGTACGATGGAGTGTCATATGCTTCAAGACCCTACTCGCCGTGGAGCAATGCCTACAAGGGCCATCAATGAAATGATA
GCCCAATTCGCAAAGCTCCGGAAGCAGCTTACGCCGTTGGAGCATTTAAAAGCGGCGGCACCGTCTACATCTACTACTCCCCCTGCTAGCTTGAAGATGCTGGAG
CAATCTTGCAGCTCTGAAGAGGAATATCAGCCCACGGGCGACTCTTCAGAGGAAGAAGAGAGCTTAGAAGGAAGCTCGGCTTGA
Protein sequenceShow/hide protein sequence
MPTTHDNSVTKNMVFLLACILEKRFIDVGQLIHKEITHCAAKRSSRLFFPNLITKLYLRRDVSVVDNEEPLKDKSVIDKCTMECHMLQDPTRRGAMPTRAINEMI
AQFAKLRKQLTPLEHLKAAAPSTSTTPPASLKMLEQSCSSEEEYQPTGDSSEEEESLEGSSA