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Moc06g17580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g17580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr6:13780817..13781329
RNA-Seq ExpressionMoc06g17580
SyntenyMoc06g17580
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149029.1 uncharacterized protein LOC111017548 [Momordica charantia]3.1e-6081.33Show/hide
Query:  MDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFT
        MDFLAASD +KCRAFQIALEGS RLWY+QLKP+SIDSYQQL+RL INQFSAR LLKLPPSHL TVKQR+ ESLT+YI+R MDEHVKVVSCTD IAMMYFT
Subjt:  MDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFT

Query:  IGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRARRSSHNKE
         G ND+NLTI+FGSRP ASLN+MLARARQYID L LWKA  ARRSS  K+
Subjt:  IGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRARRSSHNKE

XP_022152851.1 uncharacterized protein LOC111020475 [Momordica charantia]8.7e-6378.4Show/hide
Query:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF
        MSSYDGSGDP+SYVEVFE KMDFLA SD MKC AFQI LEGS RLWYRQLK +SIDSYQQL+RL INQFS R  LKLP SHLGTVKQR+ ES T YI+RF
Subjt:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF

Query:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRA
        MDEHVKVVSCTD IAMMYFT G ND+NLTI+FGS   A LNEM ARARQYID L LW A+ A
Subjt:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRA

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]2.9e-3450Show/hide
Query:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF
        M SYDGS DP  YVEVFE  MDF AA+D +KCRAFQIAL GSARLWYR+L  +SI +Y QL++  I+QF +R   +   +HL T++Q+E ++L +YI+RF
Subjt:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF

Query:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYID
         +E +KVV C+D  +M YF  G  D+  T+  G   LA+  E+L   +++ID
Subjt:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYID

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]1.7e-3449.38Show/hide
Query:  YDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDE
        YDG+ DP  YVEVFE  MDF AASD +KCRAFQIAL GSARLWYR+L  +SI +Y QL+R  + QFS+R   K   +HL T++Q+E E+L +Y++RF +E
Subjt:  YDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDE

Query:  HVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRAR
         +KV  C+D  AM YF  G  D+ LT+  G    A+  E+L +A++ ID   L +    R
Subjt:  HVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRAR

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]3.4e-3550.66Show/hide
Query:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF
        M  YDGS DP  YVEVFE  MDF AA+D +KCRAFQIAL  SARLWYR+L  +SI +Y QL++  I+QFS+R   +   +HL T++Q+E E+L +Y++RF
Subjt:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF

Query:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYID
        ++E +KV  C+D  AM YF  G  D+NLT+  G    A+  E+L +A++ ID
Subjt:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYID

TrEMBL top hitse value%identityAlignment
A0A6J1D5T3 uncharacterized protein LOC1110175481.5e-6081.33Show/hide
Query:  MDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFT
        MDFLAASD +KCRAFQIALEGS RLWY+QLKP+SIDSYQQL+RL INQFSAR LLKLPPSHL TVKQR+ ESLT+YI+R MDEHVKVVSCTD IAMMYFT
Subjt:  MDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSCTDYIAMMYFT

Query:  IGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRARRSSHNKE
         G ND+NLTI+FGSRP ASLN+MLARARQYID L LWKA  ARRSS  K+
Subjt:  IGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRARRSSHNKE

A0A6J1DIZ8 uncharacterized protein LOC1110204754.2e-6378.4Show/hide
Query:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF
        MSSYDGSGDP+SYVEVFE KMDFLA SD MKC AFQI LEGS RLWYRQLK +SIDSYQQL+RL INQFS R  LKLP SHLGTVKQR+ ES T YI+RF
Subjt:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF

Query:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRA
        MDEHVKVVSCTD IAMMYFT G ND+NLTI+FGS   A LNEM ARARQYID L LW A+ A
Subjt:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRA

A0A6J1DPN4 uncharacterized protein LOC1110230601.4e-3450Show/hide
Query:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF
        M SYDGS DP  YVEVFE  MDF AA+D +KCRAFQIAL GSARLWYR+L  +SI +Y QL++  I+QF +R   +   +HL T++Q+E ++L +YI+RF
Subjt:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF

Query:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYID
         +E +KVV C+D  +M YF  G  D+  T+  G   LA+  E+L   +++ID
Subjt:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYID

A0A6J1DS95 uncharacterized protein LOC1110234218.3e-3549.38Show/hide
Query:  YDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDE
        YDG+ DP  YVEVFE  MDF AASD +KCRAFQIAL GSARLWYR+L  +SI +Y QL+R  + QFS+R   K   +HL T++Q+E E+L +Y++RF +E
Subjt:  YDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDE

Query:  HVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRAR
         +KV  C+D  AM YF  G  D+ LT+  G    A+  E+L +A++ ID   L +    R
Subjt:  HVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRAR

A0A6J1DY58 uncharacterized protein LOC1110256631.7e-3550.66Show/hide
Query:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF
        M  YDGS DP  YVEVFE  MDF AA+D +KCRAFQIAL  SARLWYR+L  +SI +Y QL++  I+QFS+R   +   +HL T++Q+E E+L +Y++RF
Subjt:  MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRF

Query:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYID
        ++E +KV  C+D  AM YF  G  D+NLT+  G    A+  E+L +A++ ID
Subjt:  MDEHVKVVSCTDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCGTACGATGGGTCTGGCGATCCGGTGTCGTACGTCGAGGTGTTCGAAGCGAAAATGGATTTTTTGGCCGCAAGCGATGGTATGAAGTGCCGAGCATTTCAAAT
AGCGTTGGAGGGCTCGGCAAGATTGTGGTATCGGCAGCTGAAGCCGAAGTCAATTGACAGTTATCAACAGTTACAGAGGTTGTGCATCAACCAGTTCTCGGCCAGGGATT
TGCTGAAGCTGCCGCCATCCCACCTCGGAACGGTGAAGCAACGCGAGTATGAGTCCCTTACAAAATACATCTCCCGGTTCATGGACGAGCATGTCAAGGTGGTGAGTTGC
ACCGATTACATCGCCATGATGTATTTTACAATAGGGTTCAATGACCAGAACTTGACGATCGATTTCGGGAGTCGCCCTCTGGCCTCCTTGAACGAGATGCTCGCCAGAGC
TCGTCAGTATATTGATAGGTTAGGACTGTGGAAGGCCAACAGAGCCAGGCGCAGTAGCCACAACAAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCGTACGATGGGTCTGGCGATCCGGTGTCGTACGTCGAGGTGTTCGAAGCGAAAATGGATTTTTTGGCCGCAAGCGATGGTATGAAGTGCCGAGCATTTCAAAT
AGCGTTGGAGGGCTCGGCAAGATTGTGGTATCGGCAGCTGAAGCCGAAGTCAATTGACAGTTATCAACAGTTACAGAGGTTGTGCATCAACCAGTTCTCGGCCAGGGATT
TGCTGAAGCTGCCGCCATCCCACCTCGGAACGGTGAAGCAACGCGAGTATGAGTCCCTTACAAAATACATCTCCCGGTTCATGGACGAGCATGTCAAGGTGGTGAGTTGC
ACCGATTACATCGCCATGATGTATTTTACAATAGGGTTCAATGACCAGAACTTGACGATCGATTTCGGGAGTCGCCCTCTGGCCTCCTTGAACGAGATGCTCGCCAGAGC
TCGTCAGTATATTGATAGGTTAGGACTGTGGAAGGCCAACAGAGCCAGGCGCAGTAGCCACAACAAAGAATAA
Protein sequenceShow/hide protein sequence
MSSYDGSGDPVSYVEVFEAKMDFLAASDGMKCRAFQIALEGSARLWYRQLKPKSIDSYQQLQRLCINQFSARDLLKLPPSHLGTVKQREYESLTKYISRFMDEHVKVVSC
TDYIAMMYFTIGFNDQNLTIDFGSRPLASLNEMLARARQYIDRLGLWKANRARRSSHNKE