; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g18200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g18200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:14272370..14273613
RNA-Seq ExpressionMoc06g18200
SyntenyMoc06g18200
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY89240.1 hypothetical protein Acr_06g0011800 [Actinidia rufa]4.8e-1358.46Show/hide
Query:  FVVGHLVLRRV-----QTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYY
        F+ G LVLR+V     + +VG LDPTWEGP++V  + RPGTY L D  R  L+HPWNAEHLK+YY
Subjt:  FVVGHLVLRRV-----QTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYY

XP_022143486.1 uncharacterized protein LOC111013362 [Momordica charantia]9.7e-14100Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV
        MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV
Subjt:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]5.0e-1876.36Show/hide
Query:  VLRRVQTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYYP
        V +++Q+HVG LDP+WEGPFEV+GIIR GTY+LADL+ +VLAHPWNAEHLKRYYP
Subjt:  VLRRVQTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYYP

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]1.8e-0453.66Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV
        ME+  PE SWMDPI +FI+ N PQD K  +K++R+ ARF++
Subjt:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]5.7e-1489.8Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV-GHLVLRR
        MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV G  + RR
Subjt:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV-GHLVLRR

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]6.3e-2175.41Show/hide
Query:  FVVGHLVLRRVQTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYYP
        F VGHLV  ++Q+HVG LDP+WE  FEV+GI+RPGTY+LADL+R VLAHPWNAEHLKRYYP
Subjt:  FVVGHLVLRRVQTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A6J1CQD7 Ribonuclease H4.7e-14100Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV
        MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV
Subjt:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV

A0A6J1CSJ1 Ribonuclease H2.4e-1876.36Show/hide
Query:  VLRRVQTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYYP
        V +++Q+HVG LDP+WEGPFEV+GIIR GTY+LADL+ +VLAHPWNAEHLKRYYP
Subjt:  VLRRVQTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYYP

A0A6J1CSJ1 Ribonuclease H8.8e-0553.66Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV
        ME+  PE SWMDPI +FI+ N PQD K  +K++R+ ARF++
Subjt:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV

A0A6J1CSJ1 Ribonuclease H2.7e-1489.8Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV-GHLVLRR
        MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV G  + RR
Subjt:  MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVV-GHLVLRR

A0A6J1DXL9 uncharacterized protein LOC1110254483.0e-2175.41Show/hide
Query:  FVVGHLVLRRVQTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYYP
        F VGHLV  ++Q+HVG LDP+WE  FEV+GI+RPGTY+LADL+R VLAHPWNAEHLKRYYP
Subjt:  FVVGHLVLRRVQTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYYP

A0A7J0ESD6 Ribonuclease H2.3e-1358.46Show/hide
Query:  FVVGHLVLRRV-----QTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYY
        F+ G LVLR+V     + +VG LDPTWEGP++V  + RPGTY L D  R  L+HPWNAEHLK+YY
Subjt:  FVVGHLVLRRV-----QTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGGCGCTCCAGAGTCCTCATGGATGGACCCGATTGCGGACTTCATTAGGGGCAACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGACGAGCAGC
TCGGTTCGTGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACCCATGTGGGTGCCCTTGATCCGACCTGGGAGGGCCCGTTTGAGGTCAGGGGCATAATCCGACCTGGGA
CGTACGTATTGGCCGATCTGAAAAGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGGCGCTCCAGAGTCCTCATGGATGGACCCGATTGCGGACTTCATTAGGGGCAACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGACGAGCAGC
TCGGTTCGTGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACCCATGTGGGTGCCCTTGATCCGACCTGGGAGGGCCCGTTTGAGGTCAGGGGCATAATCCGACCTGGGA
CGTACGTATTGGCCGATCTGAAAAGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVGHLVLRRVQTHVGALDPTWEGPFEVRGIIRPGTYVLADLKRDVLAHPWNAEHLKRYYP