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Moc06g18280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g18280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr6:14314797..14316200
RNA-Seq ExpressionMoc06g18280
SyntenyMoc06g18280
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8691424.1 Callose synthase 12 [Hibiscus syriacus]5.1e-1433.52Show/hide
Query:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF
        +A +KT  GLM AL   Y+KP A++K+  ++                                    EV+   LLSSLPDSW     AVS+S G++ LKF
Subjt:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF

Query:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC
         D+ DL + EE+ R+ S         G+ S  SAL T+S G+   + S +G+     ++S  G  D  C+ C KKGH KR C
Subjt:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC

KAE8704670.1 hypothetical protein F3Y22_tig00110447pilonHSYRG00005 [Hibiscus syriacus]3.9e-1434.07Show/hide
Query:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF
        +A +KT  GLM AL   Y+KP A++K+  ++                                    EV+   LLSSLPDSW     AVS+S G+N LKF
Subjt:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF

Query:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC
         D+ DL + EE+ R+ S         G+ S  SAL T+S G+   + S +G+      +S  G+ D  C+ C KKGH KR C
Subjt:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC

KAE8715229.1 hypothetical protein F3Y22_tig00110186pilonHSYRG00194 [Hibiscus syriacus]3.0e-1434.07Show/hide
Query:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF
        +A +KT  GLM AL   Y+KP A++K+  ++                                    EV+   LLSSLPDSW     AVS+S G+N LKF
Subjt:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF

Query:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC
         D+ DL + EE+ R+ S         G+ S  SAL T+S G+   + S +G+      +S  G+ D  C+ C KKGH KR C
Subjt:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC

KAE8723109.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Hibiscus syriacus]3.9e-1434.07Show/hide
Query:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF
        +A +KT  GLM AL   Y+KP A++K+  ++                                    EV+   LLSSLPDSW     AVS+S G+N LKF
Subjt:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF

Query:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC
         D+ DL + EE+ R+ S         G+ S  SAL T+S G+   + S +G+      +S  G+ D  C+ C KKGH KR C
Subjt:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC

KAE8735860.1 Cytochrome P450 90B1 [Hibiscus syriacus]7.8e-1533.16Show/hide
Query:  ECASLVASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGD
        +C   +A +KT  GLM AL   Y+KP A++K+  ++                                    EV+   LLSSLPDSW     AVS+S G+
Subjt:  ECASLVASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGD

Query:  NSLKFSDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKAKTSY--KGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC
        + LKF D+ DL + EE+ R+ S         G+ S  SAL T+S G+    Y  +G+     ++S  G  D  C+ C KKGH KR C
Subjt:  NSLKFSDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKAKTSY--KGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC

TrEMBL top hitse value%identityAlignment
A0A6A2ZKQ4 Retrovirus-related Pol polyprotein from transposon TNT 1-942.5e-1434.07Show/hide
Query:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF
        +A +KT  GLM AL   Y+KP A++K+  ++                                    EV+   LLSSLPDSW     AVS+S G+N LKF
Subjt:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF

Query:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC
         D+ DL + EE+ R+ S         G+ S  SAL T+S G+   + S +G+      +S  G+ D  C+ C KKGH KR C
Subjt:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC

A0A6A3AJF7 Uncharacterized protein1.9e-1434.07Show/hide
Query:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF
        +A +KT  GLM AL   Y+KP A++K+  ++                                    EV+   LLSSLPDSW     AVS+S G+N LKF
Subjt:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF

Query:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC
         D+ DL + EE+ R+ S         G+ S  SAL T+S G+   + S +G+      +S  G+ D  C+ C KKGH KR C
Subjt:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC

A0A6A3BK95 Uncharacterized protein1.4e-1434.07Show/hide
Query:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF
        +A +KT  GLM AL   Y+KP A++K+  ++                                    EV+   LLSSLPDSW     AVS+S G+N LKF
Subjt:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF

Query:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC
         D+ DL + EE+ R+ S         G+ S  SAL T+S G+   + S +G+      +S  G+ D  C+ C KKGH KR C
Subjt:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC

A0A6A3C7U1 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-1434.07Show/hide
Query:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF
        +A +KT  GLM AL   Y+KP A++K+  ++                                    EV+   LLSSLPDSW     AVS+S G+N LKF
Subjt:  VASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGDNSLKF

Query:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC
         D+ DL + EE+ R+ S         G+ S  SAL T+S G+   + S +G+      +S  G+ D  C+ C KKGH KR C
Subjt:  SDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKA--KTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC

A0A6A3D2M2 Cytochrome P450 90B13.8e-1533.16Show/hide
Query:  ECASLVASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGD
        +C   +A +KT  GLM AL   Y+KP A++K+  ++                                    EV+   LLSSLPDSW     AVS+S G+
Subjt:  ECASLVASQKTAMGLMKALIDKYKKPFANSKIASLK------------------------------------EVKVRKLLSSLPDSWETIKMAVSNSLGD

Query:  NSLKFSDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKAKTSY--KGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC
        + LKF D+ DL + EE+ R+ S         G+ S  SAL T+S G+    Y  +G+     ++S  G  D  C+ C KKGH KR C
Subjt:  NSLKFSDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKAKTSY--KGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTGGGACGCGTCAGGACAACGCGAGAATGGAAATCAGTTGAAATGGGCACTGAAAAAAAAAGATAGAGGGCTTTTGTTGGGACCTCTAGATGGTGAATATCGGGG
TGAGATATTCAATCATCAGGCTGTGTTTGACGATGAGTGTGCAAGTCTTGTGGCAAGCCAGAAAACAGCAATGGGATTGATGAAGGCTTTGATTGACAAATATAAAAAAC
CTTTTGCCAACAGTAAGATCGCCTCTTTAAAAGAGGTGAAGGTTAGAAAACTGTTGTCTTCTTTGCCTGACAGTTGGGAGACGATAAAGATGGCGGTGTCGAATTCGTTG
GGGGATAATAGTCTGAAATTTTCAGATATTTGTGACCTTGCAATTGTAGAGGAGGTTCTCAGAAAAGGGAGTGGGAAGCATTATGCATCCACTTGCAGAGGGGATAACAG
TTTAGGATCAGCATTATTAACTCAGAGCAGTGGCAAAGCGAAGACAAGTTACAAGGGAAAGCAACATTATAACAATCAGAGGAGTGGGAATGGTAGTATAGATGTGGAGT
GTTTTTACTGCCACAAGAAGGGACACATTAAGCGTTTTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTGGGACGCGTCAGGACAACGCGAGAATGGAAATCAGTTGAAATGGGCACTGAAAAAAAAAGATAGAGGGCTTTTGTTGGGACCTCTAGATGGTGAATATCGGGG
TGAGATATTCAATCATCAGGCTGTGTTTGACGATGAGTGTGCAAGTCTTGTGGCAAGCCAGAAAACAGCAATGGGATTGATGAAGGCTTTGATTGACAAATATAAAAAAC
CTTTTGCCAACAGTAAGATCGCCTCTTTAAAAGAGGTGAAGGTTAGAAAACTGTTGTCTTCTTTGCCTGACAGTTGGGAGACGATAAAGATGGCGGTGTCGAATTCGTTG
GGGGATAATAGTCTGAAATTTTCAGATATTTGTGACCTTGCAATTGTAGAGGAGGTTCTCAGAAAAGGGAGTGGGAAGCATTATGCATCCACTTGCAGAGGGGATAACAG
TTTAGGATCAGCATTATTAACTCAGAGCAGTGGCAAAGCGAAGACAAGTTACAAGGGAAAGCAACATTATAACAATCAGAGGAGTGGGAATGGTAGTATAGATGTGGAGT
GTTTTTACTGCCACAAGAAGGGACACATTAAGCGTTTTTGCTGA
Protein sequenceShow/hide protein sequence
MSWDASGQRENGNQLKWALKKKDRGLLLGPLDGEYRGEIFNHQAVFDDECASLVASQKTAMGLMKALIDKYKKPFANSKIASLKEVKVRKLLSSLPDSWETIKMAVSNSL
GDNSLKFSDICDLAIVEEVLRKGSGKHYASTCRGDNSLGSALLTQSSGKAKTSYKGKQHYNNQRSGNGSIDVECFYCHKKGHIKRFC