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Moc06g18330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g18330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:14343056..14347584
RNA-Seq ExpressionMoc06g18330
SyntenyMoc06g18330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019189720.1 PREDICTED: uncharacterized protein LOC109184127 [Ipomoea nil]1.3e-0436.56Show/hide
Query:  IPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGRGS
        I YEG HLVCF+ G+YGH LE CP       +G+K      DP+   D      P     +T +  T + E     G W++V  + RR GR S
Subjt:  IPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGRGS

XP_022153253.1 uncharacterized protein LOC111020790 [Momordica charantia]2.8e-0740.45Show/hide
Query:  EGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLI--EVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKG
        +G HLVCF+ G+YGHKLEECPL+     + +  ++   D  G    +  E  +P   Q      +   L  SP HGPW+LVD+SKR  G
Subjt:  EGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLI--EVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKG

XP_028765360.1 uncharacterized protein LOC114723332 [Prosopis alba]2.8e-0432.26Show/hide
Query:  RLGIPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKR-RKG--RGSQ
        +L I YEG HL+CF YG +GH  + CP K     E +K    +T+   G          E   K+K       E S  +G W++V NS++ RKG  R  +
Subjt:  RLGIPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKR-RKG--RGSQ

Query:  LKSSRDPAVVRDRSRRSSHVRAVL
        ++  +     RD    S    AVL
Subjt:  LKSSRDPAVVRDRSRRSSHVRAVL

XP_031095201.1 uncharacterized protein LOC115999492 [Ipomoea triloba]2.8e-0436.17Show/hide
Query:  IPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNN---DDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGR
        I YEG HLVCF  GIYGH+ ++C        + + + +   D+T+P  G D ++   P+ +   TKS     L A   +GPW+LV    RR  R
Subjt:  IPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNN---DDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGR

XP_031127559.1 uncharacterized protein LOC116029652 [Ipomoea triloba]2.2e-0434.04Show/hide
Query:  IPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGRGSQ
        + YEG HLVCF  G+YGH+LE CP  G   ++GS+ +     P+          P   QG  K  +T        +G W++V   +RR+ R  Q
Subjt:  IPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGRGSQ

TrEMBL top hitse value%identityAlignment
A0A1R3H693 Reverse transcriptase3.1e-0433.65Show/hide
Query:  PWRLGIPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGRGSQL
        P+   + YEG   +CFD GIYGHK  EC  + F      K NN+ T P         V  VE QG  + +        P  GPW+LV    ++      +
Subjt:  PWRLGIPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGRGSQL

Query:  KSSR
         SSR
Subjt:  KSSR

A0A1R3J5H7 Reverse transcriptase6.8e-0434.34Show/hide
Query:  IPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGRGSQLKSSR
        + YEG   +CFD GIYGHK  EC  + F      K NN+ T P         V  VE QG  + +        P  GPW+LV    ++        SSR
Subjt:  IPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGRGSQLKSSR

A0A444Y4Q8 CCHC-type domain-containing protein4.0e-0431.09Show/hide
Query:  LGIPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIE---VVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGRGSQL
        L I YEG HL+CF  GIYGHK E+C      T    ++   D D + G + IE   V + +    K     +   +     G W++V    RRK +   L
Subjt:  LGIPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIE---VVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKGRGSQL

Query:  KSSRDPAVVRDRSRRSSHV
        +S++D    RD S   +++
Subjt:  KSSRDPAVVRDRSRRSSHV

A0A6J1DGZ9 uncharacterized protein LOC1110207901.3e-0740.45Show/hide
Query:  EGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLI--EVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKG
        +G HLVCF+ G+YGHKLEECPL+     + +  ++   D  G    +  E  +P   Q      +   L  SP HGPW+LVD+SKR  G
Subjt:  EGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLI--EVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRKG

A0A6P4CNW1 uncharacterized protein LOC1074790062.4e-0432.22Show/hide
Query:  IPYEGTHLVCFDYGIYGHKLEECP-LKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRK
        + YEG H+VCF+ G +GH+   CP LK     + S  N +  D K G +  E       +G+      +I+E +   GPW+LV  ++ +K
Subjt:  IPYEGTHLVCFDYGIYGHKLEECP-LKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPCHGPWILVDNSKRRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGACCTTCTGGAATCCATCTTGGGACTCATCCCGATTCGAACTGGACCGGGACGAGGCCCGAGATGCTTTCTGGATTCCATCTCGGGCCTCGTCCCGGTCCATT
TCAAACCGGGATGAGTCCCAAGATGGATTCCAGAAGGATGGTCTTCCTGGATACCATCTCGGTCTTCATCCCTGCAGGGTGGACACTAAACTACATTTTTGAGAATTTTC
AAAAGATCGTTTCAAGAATGGAAGGAAGTCTGATGATTGTAGAAGAACAAAACCAATTGAAGCGAAGTGTAAAGAAGGCTCGCAAGGTAGAATTAGATGCGGAAGATCTT
TTAGAGGAAAATTTCAGTGATGATGATGAGAAGTCGTTCAGTTCGAACGATGTACAGTTCTCGAAAGAACAATGGAGAAGAGGTAGGGATCCATGGAGATTGGGCATCCC
ATATGAAGGGACTCATTTGGTTTGCTTTGATTATGGGATTTACGGACACAAATTAGAGGAGTGCCCTCTTAAGGGATTCCATACGATAGAAGGAAGTAAGCAAAACAATG
ATGATACGGATCCAAAAGGTGGGATGGATCTGATTGAAGTTGTTGTTCCAGTGGAACGGCAGGGTAAGACGAAATCGAACTCTACTATAATATTAGAAGCCTCACCATGT
CATGGGCCATGGATTTTGGTGGATAACTCGAAGAGAAGGAAGGGGCGAGGATCACAGCTAAAATCAAGTAGGGATCCGGCTGTTGTCAGGGATCGCTCCAGAAGAAGTAG
TCATGTAAGGGCAGTATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGACCTTCTGGAATCCATCTTGGGACTCATCCCGATTCGAACTGGACCGGGACGAGGCCCGAGATGCTTTCTGGATTCCATCTCGGGCCTCGTCCCGGTCCATT
TCAAACCGGGATGAGTCCCAAGATGGATTCCAGAAGGATGGTCTTCCTGGATACCATCTCGGTCTTCATCCCTGCAGGGTGGACACTAAACTACATTTTTGAGAATTTTC
AAAAGATCGTTTCAAGAATGGAAGGAAGTCTGATGATTGTAGAAGAACAAAACCAATTGAAGCGAAGTGTAAAGAAGGCTCGCAAGGTAGAATTAGATGCGGAAGATCTT
TTAGAGGAAAATTTCAGTGATGATGATGAGAAGTCGTTCAGTTCGAACGATGTACAGTTCTCGAAAGAACAATGGAGAAGAGGTAGGGATCCATGGAGATTGGGCATCCC
ATATGAAGGGACTCATTTGGTTTGCTTTGATTATGGGATTTACGGACACAAATTAGAGGAGTGCCCTCTTAAGGGATTCCATACGATAGAAGGAAGTAAGCAAAACAATG
ATGATACGGATCCAAAAGGTGGGATGGATCTGATTGAAGTTGTTGTTCCAGTGGAACGGCAGGGTAAGACGAAATCGAACTCTACTATAATATTAGAAGCCTCACCATGT
CATGGGCCATGGATTTTGGTGGATAACTCGAAGAGAAGGAAGGGGCGAGGATCACAGCTAAAATCAAGTAGGGATCCGGCTGTTGTCAGGGATCGCTCCAGAAGAAGTAG
TCATGTAAGGGCAGTATTGTAA
Protein sequenceShow/hide protein sequence
MVGPSGIHLGTHPDSNWTGTRPEMLSGFHLGPRPGPFQTGMSPKMDSRRMVFLDTISVFIPAGWTLNYIFENFQKIVSRMEGSLMIVEEQNQLKRSVKKARKVELDAEDL
LEENFSDDDEKSFSSNDVQFSKEQWRRGRDPWRLGIPYEGTHLVCFDYGIYGHKLEECPLKGFHTIEGSKQNNDDTDPKGGMDLIEVVVPVERQGKTKSNSTIILEASPC
HGPWILVDNSKRRKGRGSQLKSSRDPAVVRDRSRRSSHVRAVL