; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g18680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g18680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:14568712..14569583
RNA-Seq ExpressionMoc06g18680
SyntenyMoc06g18680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]8.8e-1948.92Show/hide
Query:  GGVD--YSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK--------------------------------
        GG D  Y+ +  DLR+HL ++KR+ S     SPSCS++  NSN +A+S Y P+T EGVITREEFD +K                                
Subjt:  GGVD--YSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK--------------------------------

Query:  NSILEAPIPPKFKTPAMKPYDGSKDLKDYVEVFEGLKDF
        + ILEA IP KFKTP MKPYDGSKD KDYVEVFEGL DF
Subjt:  NSILEAPIPPKFKTPAMKPYDGSKDLKDYVEVFEGLKDF

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]2.0e-2348.97Show/hide
Query:  QGSP-LHPDDDERIADNGGVDYSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMKN----------------
        +G+P + P D E I ++GG+DYS RD+D+RKHL +KK+  SR  E S S S K+SNSNL+AQSKY+PL  E +ITREEFDLMK+                
Subjt:  QGSP-LHPDDDERIADNGGVDYSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMKN----------------

Query:  ----------------SILEAPIPPKFKTPAMKPYDGSKDLKDYV
                         ILEAPIPPKFKTP MKPYDG   L  +V
Subjt:  ----------------SILEAPIPPKFKTPAMKPYDGSKDLKDYV

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]3.2e-2953.25Show/hide
Query:  QGSP-LHPDDDERIADNGGVDYSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK-----------------
        +G+P + P + E I ++ GVDYS RD+DLRKHL DKK+  S   E S S S ++SNSNL+AQSKY+PL  E VI REEFDLMK                 
Subjt:  QGSP-LHPDDDERIADNGGVDYSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK-----------------

Query:  ---------------NSILEAPIPPKFKTPAMKPYDGSKDLKDYVEVFEGLKDF
                       + I+EAPIPPKFKTP MKPYDGSKD KDYVEVFEGL DF
Subjt:  ---------------NSILEAPIPPKFKTPAMKPYDGSKDLKDYVEVFEGLKDF

XP_022156638.1 uncharacterized protein LOC111023488 [Momordica charantia]3.6e-2055.46Show/hide
Query:  MVQSTESANITERRGMNGNNGTQHELDAKVAEDQAQAWQEVDLPWRSTRNTNTIL-PLHIR-------------DLAEQTTYLRRRRQGSPLHPDDDERI
        MVQ  ESAN  ERR +NGNN  QHELDAKV E+Q +A QEVD P RSTRN NTIL P H R             DL E    L       P+HPDD E  
Subjt:  MVQSTESANITERRGMNGNNGTQHELDAKVAEDQAQAWQEVDLPWRSTRNTNTIL-PLHIR-------------DLAEQTTYLRRRRQGSPLHPDDDERI

Query:  ADNGGVDYSRRDHDLRKHL
         +N G+DYS RDHDLRKHL
Subjt:  ADNGGVDYSRRDHDLRKHL

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]8.8e-1954.39Show/hide
Query:  SRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK--------------------------------NSILEAPIPPKFKTPAMKPYDGSKD
        SR SE SPS S ++SNS+ +AQSKY+PLT E VITREEFDLMK                                + ILE PIPPKFKTP MK YD SKD
Subjt:  SRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK--------------------------------NSILEAPIPPKFKTPAMKPYDGSKD

Query:  LKDYVEVFEGLKDF
         KDYVEVFEGL DF
Subjt:  LKDYVEVFEGLKDF

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196344.3e-1948.92Show/hide
Query:  GGVD--YSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK--------------------------------
        GG D  Y+ +  DLR+HL ++KR+ S     SPSCS++  NSN +A+S Y P+T EGVITREEFD +K                                
Subjt:  GGVD--YSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK--------------------------------

Query:  NSILEAPIPPKFKTPAMKPYDGSKDLKDYVEVFEGLKDF
        + ILEA IP KFKTP MKPYDGSKD KDYVEVFEGL DF
Subjt:  NSILEAPIPPKFKTPAMKPYDGSKDLKDYVEVFEGLKDF

A0A6J1DNM4 Ribonuclease H9.8e-2448.97Show/hide
Query:  QGSP-LHPDDDERIADNGGVDYSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMKN----------------
        +G+P + P D E I ++GG+DYS RD+D+RKHL +KK+  SR  E S S S K+SNSNL+AQSKY+PL  E +ITREEFDLMK+                
Subjt:  QGSP-LHPDDDERIADNGGVDYSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMKN----------------

Query:  ----------------SILEAPIPPKFKTPAMKPYDGSKDLKDYV
                         ILEAPIPPKFKTP MKPYDG   L  +V
Subjt:  ----------------SILEAPIPPKFKTPAMKPYDGSKDLKDYV

A0A6J1DPC9 uncharacterized protein LOC1110222801.6e-2953.25Show/hide
Query:  QGSP-LHPDDDERIADNGGVDYSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK-----------------
        +G+P + P + E I ++ GVDYS RD+DLRKHL DKK+  S   E S S S ++SNSNL+AQSKY+PL  E VI REEFDLMK                 
Subjt:  QGSP-LHPDDDERIADNGGVDYSRRDHDLRKHLVDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK-----------------

Query:  ---------------NSILEAPIPPKFKTPAMKPYDGSKDLKDYVEVFEGLKDF
                       + I+EAPIPPKFKTP MKPYDGSKD KDYVEVFEGL DF
Subjt:  ---------------NSILEAPIPPKFKTPAMKPYDGSKDLKDYVEVFEGLKDF

A0A6J1DR60 uncharacterized protein LOC1110234881.7e-2055.46Show/hide
Query:  MVQSTESANITERRGMNGNNGTQHELDAKVAEDQAQAWQEVDLPWRSTRNTNTIL-PLHIR-------------DLAEQTTYLRRRRQGSPLHPDDDERI
        MVQ  ESAN  ERR +NGNN  QHELDAKV E+Q +A QEVD P RSTRN NTIL P H R             DL E    L       P+HPDD E  
Subjt:  MVQSTESANITERRGMNGNNGTQHELDAKVAEDQAQAWQEVDLPWRSTRNTNTIL-PLHIR-------------DLAEQTTYLRRRRQGSPLHPDDDERI

Query:  ADNGGVDYSRRDHDLRKHL
         +N G+DYS RDHDLRKHL
Subjt:  ADNGGVDYSRRDHDLRKHL

A0A6J1DVR0 uncharacterized protein LOC1110245034.3e-1954.39Show/hide
Query:  SRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK--------------------------------NSILEAPIPPKFKTPAMKPYDGSKD
        SR SE SPS S ++SNS+ +AQSKY+PLT E VITREEFDLMK                                + ILE PIPPKFKTP MK YD SKD
Subjt:  SRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMK--------------------------------NSILEAPIPPKFKTPAMKPYDGSKD

Query:  LKDYVEVFEGLKDF
         KDYVEVFEGL DF
Subjt:  LKDYVEVFEGLKDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGTCAACAGAGTCTGCAAACATAACAGAACGGAGAGGCATGAACGGAAACAATGGCACTCAACACGAGCTTGATGCCAAGGTGGCCGAGGATCAAGCA
CAGGCATGGCAAGAGGTAGACCTACCTTGGAGGTCGACTCGCAACACGAATACGATCTTGCCCCTGCACATACGAGACCTAGCGGAGCAGACGACCTACCTACGA
CGGAGACGACAAGGATCCCCCCTTCATCCCGATGACGATGAGCGCATTGCTGACAATGGAGGGGTCGACTATAGTCGGCGAGATCACGATCTCAGAAAGCACCTC
GTCGACAAGAAGAGGAACATCTCACGAGGCTCGGAGCTCTCCCCATCCTGCTCCAACAAATACTCCAACTCCAACCTCGAAGCTCAGTCAAAGTACCAACCCTTG
ACATCGGAAGGAGTGATCACGAGGGAAGAGTTCGACCTTATGAAAAACAGCATTTTGGAGGCCCCAATTCCTCCAAAGTTCAAGACACCCGCTATGAAGCCCTAT
GATGGGTCTAAGGACCTGAAGGACTATGTGGAGGTCTTTGAAGGCCTCAAGGACTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAGTCAACAGAGTCTGCAAACATAACAGAACGGAGAGGCATGAACGGAAACAATGGCACTCAACACGAGCTTGATGCCAAGGTGGCCGAGGATCAAGCA
CAGGCATGGCAAGAGGTAGACCTACCTTGGAGGTCGACTCGCAACACGAATACGATCTTGCCCCTGCACATACGAGACCTAGCGGAGCAGACGACCTACCTACGA
CGGAGACGACAAGGATCCCCCCTTCATCCCGATGACGATGAGCGCATTGCTGACAATGGAGGGGTCGACTATAGTCGGCGAGATCACGATCTCAGAAAGCACCTC
GTCGACAAGAAGAGGAACATCTCACGAGGCTCGGAGCTCTCCCCATCCTGCTCCAACAAATACTCCAACTCCAACCTCGAAGCTCAGTCAAAGTACCAACCCTTG
ACATCGGAAGGAGTGATCACGAGGGAAGAGTTCGACCTTATGAAAAACAGCATTTTGGAGGCCCCAATTCCTCCAAAGTTCAAGACACCCGCTATGAAGCCCTAT
GATGGGTCTAAGGACCTGAAGGACTATGTGGAGGTCTTTGAAGGCCTCAAGGACTTCTAG
Protein sequenceShow/hide protein sequence
MVQSTESANITERRGMNGNNGTQHELDAKVAEDQAQAWQEVDLPWRSTRNTNTILPLHIRDLAEQTTYLRRRRQGSPLHPDDDERIADNGGVDYSRRDHDLRKHL
VDKKRNISRGSELSPSCSNKYSNSNLEAQSKYQPLTSEGVITREEFDLMKNSILEAPIPPKFKTPAMKPYDGSKDLKDYVEVFEGLKDF