; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g18940 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g18940
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr6:14749646..14751234
RNA-Seq ExpressionMoc06g18940
SyntenyMoc06g18940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151295.1 uncharacterized protein LOC111019259 [Momordica charantia]5.6e-2150.33Show/hide
Query:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC
        MS SIIALLA EKLN ENYKQ KSNLN ILVI+DL  V                     +E   L+  +D                        ATVA+ 
Subjt:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC

Query:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
          YD WI ANDKA+VYIL SIS+VL KK E+MVTAKEIMDSLQ MFGQ SS
Subjt:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]3.6e-2856.29Show/hide
Query:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC
        MSTSIIALLAA++LNGENYKQWKSNLNTILVIDDL  V     E   Q  A                                          NATVA+ 
Subjt:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC

Query:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
         AYD WI ANDKAKVYILASISDVL KK ED +TAKEIMDSLQ MFGQPSS
Subjt:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]1.2e-2351.66Show/hide
Query:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC
        MSTSII LL A+KLN ENYKQWKSN+NTIL+IDDL  V     E   Q  A                                          NATVA+ 
Subjt:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC

Query:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
        N YD WI ANDKAKV ILASISDVL KK E+ V  KEIMDSLQ MFGQPSS
Subjt:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]5.2e-2754.67Show/hide
Query:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC
        MS SIIALLAA+KLNGENY+QWKSNLNTILVIDDL  V     E   Q                                            +NATVA+ 
Subjt:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC

Query:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPS
        NAYD WI +NDKAKVYILASISDVL KK ED VT KEIMDSLQ MFGQPS
Subjt:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPS
XP_022158202.1 uncharacterized protein LOC111024739 [Momordica charantia]2.5e-2148Show/hide
Query:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC
        MSTS+IALLA EKLNG+NY QWK+NLN ILV+DDL  V    +E  RQ                                             NA  A  
Subjt:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC

Query:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPS
        +AYD WI ANDKAKVYI ASISDVL KK + MVT +EIMDSL+ MFGQ S
Subjt:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPS
TrEMBL top hitse value%identityAlignment
A0A6J1DAT1 uncharacterized protein LOC1110192592.7e-2150.33Show/hide
Query:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC
        MS SIIALLA EKLN ENYKQ KSNLN ILVI+DL  V                     +E   L+  +D                        ATVA+ 
Subjt:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC

Query:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
          YD WI ANDKA+VYIL SIS+VL KK E+MVTAKEIMDSLQ MFGQ SS
Subjt:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
A0A6J1DFZ2 uncharacterized protein LOC1110200951.8e-2856.29Show/hide
Query:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC
        MSTSIIALLAA++LNGENYKQWKSNLNTILVIDDL  V     E   Q  A                                          NATVA+ 
Subjt:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC

Query:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
         AYD WI ANDKAKVYILASISDVL KK ED +TAKEIMDSLQ MFGQPSS
Subjt:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
A0A6J1DW68 uncharacterized protein LOC1110246375.8e-2451.66Show/hide
Query:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC
        MSTSII LL A+KLN ENYKQWKSN+NTIL+IDDL  V     E   Q  A                                          NATVA+ 
Subjt:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC

Query:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
        N YD WI ANDKAKV ILASISDVL KK E+ V  KEIMDSLQ MFGQPSS
Subjt:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS
A0A6J1DWL0 uncharacterized protein LOC1110247342.5e-2754.67Show/hide
Query:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC
        MS SIIALLAA+KLNGENY+QWKSNLNTILVIDDL  V     E   Q                                            +NATVA+ 
Subjt:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC

Query:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPS
        NAYD WI +NDKAKVYILASISDVL KK ED VT KEIMDSLQ MFGQPS
Subjt:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPS
A0A6J1DWL4 uncharacterized protein LOC1110247391.2e-2148Show/hide
Query:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC
        MSTS+IALLA EKLNG+NY QWK+NLN ILV+DDL  V    +E  RQ                                             NA  A  
Subjt:  MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMC

Query:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPS
        +AYD WI ANDKAKVYI ASISDVL KK + MVT +EIMDSL+ MFGQ S
Subjt:  NAYDWWINANDKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACTTCTATCATTGCTCTGTTAGCAGCTGAAAAACTTAACGGCGAGAACTACAAACAATGGAAATCGAACCTAAACACTATACTTGTTATAGATGATCTTAGCAT
TGTTGATGCTGCAGCATCGGAGTCAAAAAGGCAGAAAAAGGCAGAGTTGACATTTACAGCTTTTACTCGAGAAATTACTGCATTATCAATCCTCGTGGATACGATCTTTT
TATCACTTGTTACATCGGTTGTGTACACTTGCACAAAGGGTTTAAACCGTACCAACACTAACGCCACTGTGGCGATGTGCAACGCCTATGACTGGTGGATCAATGCCAAC
GACAAGGCCAAGGTCTACATCTTAGCGAGCATATCTGATGTGCTTACTAAGAAGCAGGAGGACATGGTCACCGCCAAGGAGATCATGGACTCGCTGCAGAGGATGTTTGG
ACAACCGTCCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGACTTCTATCATTGCTCTGTTAGCAGCTGAAAAACTTAACGGCGAGAACTACAAACAATGGAAATCGAACCTAAACACTATACTTGTTATAGATGATCTTAGCAT
TGTTGATGCTGCAGCATCGGAGTCAAAAAGGCAGAAAAAGGCAGAGTTGACATTTACAGCTTTTACTCGAGAAATTACTGCATTATCAATCCTCGTGGATACGATCTTTT
TATCACTTGTTACATCGGTTGTGTACACTTGCACAAAGGGTTTAAACCGTACCAACACTAACGCCACTGTGGCGATGTGCAACGCCTATGACTGGTGGATCAATGCCAAC
GACAAGGCCAAGGTCTACATCTTAGCGAGCATATCTGATGTGCTTACTAAGAAGCAGGAGGACATGGTCACCGCCAAGGAGATCATGGACTCGCTGCAGAGGATGTTTGG
ACAACCGTCCTCATAG
Protein sequenceShow/hide protein sequence
MSTSIIALLAAEKLNGENYKQWKSNLNTILVIDDLSIVDAAASESKRQKKAELTFTAFTREITALSILVDTIFLSLVTSVVYTCTKGLNRTNTNATVAMCNAYDWWINAN
DKAKVYILASISDVLTKKQEDMVTAKEIMDSLQRMFGQPSS