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Moc06g19110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g19110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr6:14896760..14902412
RNA-Seq ExpressionMoc06g19110
SyntenyMoc06g19110
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR016197 - Chromo-like domain superfamily
IPR023780 - Chromo domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025808.1 reverse transcriptase [Cucumis melo var. makuwa]4.5e-1350.57Show/hide
Query:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL
        +SN+K YH DT +  RN +TRP + L+ K DK+VE ILAER RR  RP R +HE+LVKWK LL EE  W       A+K+  + F L
Subjt:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL

KAA0053507.1 reverse transcriptase [Cucumis melo var. makuwa]7.6e-1350.57Show/hide
Query:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL
        +SN+K YH DT +  RN +TRP + L+ K DK+VE ILAER RR  RP R +HE+LVKWK L  EEI W       A+K+  + F L
Subjt:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL

KAA0060055.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-1250.57Show/hide
Query:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL
        +SN+K YH DT +  RN +TRP + L+ K DK+VE ILAER RR  RP R +HE+LVKWK L  EE  W       A+K+  K F L
Subjt:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL

TYK04336.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Cucumis melo var. makuwa]1.3e-1250.57Show/hide
Query:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL
        +SN+K YH DT +  RN +TRP + L+ K DK+VE ILAER RR  RP R +HE+LVKWK L  EE  W       A+K+  K F L
Subjt:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL

XP_022148918.1 uncharacterized protein LOC111017468 [Momordica charantia]3.1e-2281.16Show/hide
Query:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGW
        +SN+K YH DTV+PTRNEITRPA+ LTNKVDKEVESILAERTRRV  PRRD+ EFLVKWKGL DEEI W
Subjt:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGW

TrEMBL top hitse value%identityAlignment
A0A5A7UG93 Reverse transcriptase3.7e-1350.57Show/hide
Query:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL
        +SN+K YH DT +  RN +TRP + L+ K DK+VE ILAER RR  RP R +HE+LVKWK L  EEI W       A+K+  + F L
Subjt:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL

A0A5A7V2E6 Reverse transcriptase6.3e-1350.57Show/hide
Query:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL
        +SN+K YH DT +  RN +TRP + L+ K DK+VE ILAER RR  RP R +HE+LVKWK L  EE  W       A+K+  K F L
Subjt:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL

A0A5D3C1P4 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase6.3e-1350.57Show/hide
Query:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL
        +SN+K YH DT +  RN +TRP + L+ K DK+VE ILAER RR  RP R +HE+LVKWK L  EE  W       A+K+  K F L
Subjt:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL

A0A5D3CEJ8 Reverse transcriptase2.2e-1350.57Show/hide
Query:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL
        +SN+K YH DT +  RN +TRP + L+ K DK+VE ILAER RR  RP R +HE+LVKWK LL EE  W       A+K+  + F L
Subjt:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSL

A0A6J1D5E5 uncharacterized protein LOC1110174681.5e-2281.16Show/hide
Query:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGW
        +SN+K YH DTV+PTRNEITRPA+ LTNKVDKEVESILAERTRRV  PRRD+ EFLVKWKGL DEEI W
Subjt:  MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAACATGAAGTCTTACCATCCAGACACTGTCAACCCTACACGAAATGAGATAACTCGTCCAGCAGTCACGTTGACAAACAAGGTTGACAAAGAAGTTGAGTCAAT
CCTCGCCGAAAGAACACGCCGAGTAGGAAGACCACGAAGGGACGTACATGAATTCCTAGTCAAGTGGAAAGGGCTCCTAGATGAAGAGATCGGTTGGCTTACAACAACTT
TTCAAAATGCTTTCAAACGTTTTCCAAAACCTTTTTCTCTAACCCCGTTTTACAAAACCGTTTTCTCGAGAACGGAGGTGGAGGTTGTGACATATAGCCTTTGTGCCACC
GGCTATTCGGAACTGGAAGGGAATGTGTATAAGCAATGGGACTCCGACCTGGTTTGTGAATTTGATTCGAGCTTGTATTACTTCTCCCATGTTCTCGATCTCTTTCAATG
TGACCTGATGATTTACTCGCTCGGGGATCTCGGTTATCTATCCTTTATTAAGGATGCTTTGGTATTTTTTGGAGTGTTGGCGGGTCTTGTTGTGAATACTCGGAAGAGCT
CGTTTTTCGAAGCGAGTCTTCCTGATGTTGAGGTAGAGCGATTGGCAGCTTTGTTAGGATTTTCGTTGGATTTGCTTCCTATTCGTTATCTCGGGTCGGTTGCAGCTTAT
TCGGTTGGTTCTGCAGAGTTTCAGAAGAGGTGTGAGCGCAGGTGGTCGGGGGCTAAGGTAGCTTGGTATGAGGTGTGTATTCCTTTGCGGGTGGCTTGGGTGGAGGCTTA
TGTTATTCGGGAGATTGTATTTGGACTGTTCGTGATTCGCCTTGGGGGTTCGATTTATCTGAGGTTTGGTGATCAGATTATCTATGATATTGCAAGCTCATCCCAGATGA
AGGTTGCTTCTTTTCTATTTCCAAATGGTTTATGGCATTGGCCTGGAGGGTCGACTAATCTCCAACAACTGGTCTCTGAGATTTCATCCGTGCAAGTTTTTGTTGGGAGA
GTTGATATGCCCATTTGGATTCTGACACCGTCAGGTCTCTTCTCGGTGTCTCGTGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAACATGAAGTCTTACCATCCAGACACTGTCAACCCTACACGAAATGAGATAACTCGTCCAGCAGTCACGTTGACAAACAAGGTTGACAAAGAAGTTGAGTCAAT
CCTCGCCGAAAGAACACGCCGAGTAGGAAGACCACGAAGGGACGTACATGAATTCCTAGTCAAGTGGAAAGGGCTCCTAGATGAAGAGATCGGTTGGCTTACAACAACTT
TTCAAAATGCTTTCAAACGTTTTCCAAAACCTTTTTCTCTAACCCCGTTTTACAAAACCGTTTTCTCGAGAACGGAGGTGGAGGTTGTGACATATAGCCTTTGTGCCACC
GGCTATTCGGAACTGGAAGGGAATGTGTATAAGCAATGGGACTCCGACCTGGTTTGTGAATTTGATTCGAGCTTGTATTACTTCTCCCATGTTCTCGATCTCTTTCAATG
TGACCTGATGATTTACTCGCTCGGGGATCTCGGTTATCTATCCTTTATTAAGGATGCTTTGGTATTTTTTGGAGTGTTGGCGGGTCTTGTTGTGAATACTCGGAAGAGCT
CGTTTTTCGAAGCGAGTCTTCCTGATGTTGAGGTAGAGCGATTGGCAGCTTTGTTAGGATTTTCGTTGGATTTGCTTCCTATTCGTTATCTCGGGTCGGTTGCAGCTTAT
TCGGTTGGTTCTGCAGAGTTTCAGAAGAGGTGTGAGCGCAGGTGGTCGGGGGCTAAGGTAGCTTGGTATGAGGTGTGTATTCCTTTGCGGGTGGCTTGGGTGGAGGCTTA
TGTTATTCGGGAGATTGTATTTGGACTGTTCGTGATTCGCCTTGGGGGTTCGATTTATCTGAGGTTTGGTGATCAGATTATCTATGATATTGCAAGCTCATCCCAGATGA
AGGTTGCTTCTTTTCTATTTCCAAATGGTTTATGGCATTGGCCTGGAGGGTCGACTAATCTCCAACAACTGGTCTCTGAGATTTCATCCGTGCAAGTTTTTGTTGGGAGA
GTTGATATGCCCATTTGGATTCTGACACCGTCAGGTCTCTTCTCGGTGTCTCGTGCGTAG
Protein sequenceShow/hide protein sequence
MSNMKSYHPDTVNPTRNEITRPAVTLTNKVDKEVESILAERTRRVGRPRRDVHEFLVKWKGLLDEEIGWLTTTFQNAFKRFPKPFSLTPFYKTVFSRTEVEVVTYSLCAT
GYSELEGNVYKQWDSDLVCEFDSSLYYFSHVLDLFQCDLMIYSLGDLGYLSFIKDALVFFGVLAGLVVNTRKSSFFEASLPDVEVERLAALLGFSLDLLPIRYLGSVAAY
SVGSAEFQKRCERRWSGAKVAWYEVCIPLRVAWVEAYVIREIVFGLFVIRLGGSIYLRFGDQIIYDIASSSQMKVASFLFPNGLWHWPGGSTNLQQLVSEISSVQVFVGR
VDMPIWILTPSGLFSVSRA