; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g19140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g19140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:14908374..14913341
RNA-Seq ExpressionMoc06g19140
SyntenyMoc06g19140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141796.1 uncharacterized protein LOC111012081 [Momordica charantia]6.8e-1629.74Show/hide
Query:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDR
        G   + PFT+ ++  P+P K K P +KPY  S DP D++E++E                                          LR+ F++QFS++H  
Subjt:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDR

Query:  KTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISR
        K + THL T+ Q E E LR++V RF  E++KV  CSDD+    F + + +  L      +   T++EV+Q+ ++ +   ++LRTK  + +  ISR
Subjt:  KTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISR

XP_022151609.1 uncharacterized protein LOC111019523 [Momordica charantia]8.6e-4348.64Show/hide
Query:  MAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDRKTSDTHLPTVYQ
        MAYPLP KMKKPDMKPY    +PIDH+ELYE                                          LRKVFI+QFSAQHDRK SDTHL T++Q
Subjt:  MAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDRKTSDTHLPTVYQ

Query:  SEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQARGRGHLKKYVRKK
         E E+L +FVGRF+ EKIKV DCS+D  RMTF S IN PNL+ S+A+Q  RTY+E IQ+AR+YMHA+DVL+ K LQHQT  S+  +ARG+        KK
Subjt:  SEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQARGRGHLKKYVRKK

Query:  DACSSQEKRKLDRPDRDDQD
              ++RK +   R  Q+
Subjt:  DACSSQEKRKLDRPDRDDQD

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]6.8e-1628.31Show/hide
Query:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDR
        G   + PFT+ ++  P+P K K P +KPY  S DP D++E++E                                          LR+ F++QFS++H  
Subjt:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDR

Query:  KTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQAR
        K + THL T+ Q E E LR++V RF  E++KV  CSDD+    F + + +         +   T++EV+Q+A++ +  +++LRTK         R  +  
Subjt:  KTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQAR

Query:  GRGHLKKYVRKKDACSSQE
        GRG   K + + D  S  +
Subjt:  GRGHLKKYVRKKDACSSQE

XP_022155997.1 uncharacterized protein LOC111022972 [Momordica charantia]1.7e-2234.26Show/hide
Query:  SDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQARG-
        S THL T+ Q E E+LR+FVGRFM EKIKVPD SDD  RMTF  A+NN +L+ S+A+Q   TYSE IQ+ARQ+MHAKD+L+ KHLQ+QT+ S+  ++R  
Subjt:  SDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQARG-

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------RGHLKKYVRKKDACSSQEKRKLDRPDRDDQDKSLSPKRREADKK
               + HLKKYV KKDACS   KRK DR DR D+D S +PK+R+  K+
Subjt:  -------RGHLKKYVRKKDACSSQEKRKLDRPDRDDQDKSLSPKRREADKK

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]4.7e-1729.76Show/hide
Query:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQH-D
        G   + PFT+ I+  P+P K K P MKPY  S DP D++E++E                                          LRK FISQFS++H D
Subjt:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQH-D

Query:  RKTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQA
        RKT+ THL T+ Q E E LR++V RF+ E++KV  CSDD+    F + + + NL      +   T++EV+Q+A++ +  +++L+T               
Subjt:  RKTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQA

Query:  RGRGHLKKYVRKKDACSSQEKRKLDRPDRDDQDKSLSPKRREADKKRSDGDS
                              K DRP++    K L+ ++R+AD K  D  S
Subjt:  RGRGHLKKYVRKKDACSSQEKRKLDRPDRDDQDKSLSPKRREADKKRSDGDS

TrEMBL top hitse value%identityAlignment
A0A6J1CKB3 uncharacterized protein LOC1110120813.3e-1629.74Show/hide
Query:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDR
        G   + PFT+ ++  P+P K K P +KPY  S DP D++E++E                                          LR+ F++QFS++H  
Subjt:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDR

Query:  KTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISR
        K + THL T+ Q E E LR++V RF  E++KV  CSDD+    F + + +  L      +   T++EV+Q+ ++ +   ++LRTK  + +  ISR
Subjt:  KTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISR

A0A6J1DDJ7 uncharacterized protein LOC1110195234.1e-4348.64Show/hide
Query:  MAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDRKTSDTHLPTVYQ
        MAYPLP KMKKPDMKPY    +PIDH+ELYE                                          LRKVFI+QFSAQHDRK SDTHL T++Q
Subjt:  MAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDRKTSDTHLPTVYQ

Query:  SEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQARGRGHLKKYVRKK
         E E+L +FVGRF+ EKIKV DCS+D  RMTF S IN PNL+ S+A+Q  RTY+E IQ+AR+YMHA+DVL+ K LQHQT  S+  +ARG+        KK
Subjt:  SEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQARGRGHLKKYVRKK

Query:  DACSSQEKRKLDRPDRDDQD
              ++RK +   R  Q+
Subjt:  DACSSQEKRKLDRPDRDDQD

A0A6J1DDS5 uncharacterized protein LOC1110198423.3e-1628.31Show/hide
Query:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDR
        G   + PFT+ ++  P+P K K P +KPY  S DP D++E++E                                          LR+ F++QFS++H  
Subjt:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQHDR

Query:  KTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQAR
        K + THL T+ Q E E LR++V RF  E++KV  CSDD+    F + + +         +   T++EV+Q+A++ +  +++LRTK         R  +  
Subjt:  KTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQAR

Query:  GRGHLKKYVRKKDACSSQE
        GRG   K + + D  S  +
Subjt:  GRGHLKKYVRKKDACSSQE

A0A6J1DQW1 uncharacterized protein LOC1110229728.1e-2334.26Show/hide
Query:  SDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQARG-
        S THL T+ Q E E+LR+FVGRFM EKIKVPD SDD  RMTF  A+NN +L+ S+A+Q   TYSE IQ+ARQ+MHAKD+L+ KHLQ+QT+ S+  ++R  
Subjt:  SDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQARG-

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------RGHLKKYVRKKDACSSQEKRKLDRPDRDDQDKSLSPKRREADKK
               + HLKKYV KKDACS   KRK DR DR D+D S +PK+R+  K+
Subjt:  -------RGHLKKYVRKKDACSSQEKRKLDRPDRDDQDKSLSPKRREADKK

A0A6J1DY58 uncharacterized protein LOC1110256632.3e-1729.76Show/hide
Query:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQH-D
        G   + PFT+ I+  P+P K K P MKPY  S DP D++E++E                                          LRK FISQFS++H D
Subjt:  GKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHMELYE------------------------------------------LRKVFISQFSAQH-D

Query:  RKTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQA
        RKT+ THL T+ Q E E LR++V RF+ E++KV  CSDD+    F + + + NL      +   T++EV+Q+A++ +  +++L+T               
Subjt:  RKTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHLQHQTVISRQAQA

Query:  RGRGHLKKYVRKKDACSSQEKRKLDRPDRDDQDKSLSPKRREADKKRSDGDS
                              K DRP++    K L+ ++R+AD K  D  S
Subjt:  RGRGHLKKYVRKKDACSSQEKRKLDRPDRDDQDKSLSPKRREADKKRSDGDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCGCAATGTGCCTCAGCAGGCCAGGCAACAGACCCCGGTTACACCGAATTTGGGGTCTACCCCAGCTACTGGAGCGGTCAACTCAAATATAATTCAG
TGGCCGCATACCATTGCGACCACCACCACGTCAACATATCAGGCCACGGTTGATGTACCAGAGACGGATGATGCCCATTGGGTAGAATTAGGCAAACGGGAAGAT
CCCCCATTCACCGCCCCCATAATGGCATATCCTCTTCCACTGAAAATGAAAAAACCGGACATGAAGCCATATGGCAGATCAACTGACCCAATCGATCACATGGAA
CTGTACGAGTTGAGGAAGGTCTTCATAAGCCAGTTCTCTGCACAGCACGATAGGAAAACGTCTGATACCCATCTCCCCACCGTTTACCAATCAGAGGATGAGGCG
CTGCGTGATTTCGTTGGGAGATTTATGGCAGAGAAAATTAAGGTACCTGACTGCTCAGATGACACAACCAGAATGACATTCACATCGGCTATAAATAATCCAAAC
TTGGTTCATTCTTTTGCCATTCAACTAGCTCGGACTTACAGCGAAGTGATTCAACAAGCACGTCAATATATGCATGCGAAGGATGTACTACGGACAAAACACCTC
CAGCATCAAACAGTAATATCGAGGCAAGCACAAGCTCGAGGGCGAGGTCATTTGAAAAAGTACGTAAGAAAGAAAGACGCCTGCTCTTCTCAAGAGAAGAGGAAA
TTAGATCGACCAGATCGTGATGACCAAGATAAATCTCTCTCACCTAAGAGGAGGGAAGCGGACAAAAAAAGGTCTGACGGGGATTCACCGCTAATAGAAGAATCA
AAGGAACAAGCTTACGGAGCTCCATCTCGGAAGGTTCCGAGATGGAGCATCTGCCACTTCCTATTAAGGATTGACTTGGTATTTCCAGGAAAGTGTAAGAAATTT
CTCCTCGAACCTAATATTGAGTCCGAGCTGCTTATTGACTTGAGCGTCGGAGATTTTGCCCTTGTTATAGAGAACAAAAACGACACGAAACGGGACAAGGAGTTG
AAGCCTGAGATCATCGATTGGGGGAGACCGGCCCGCAACGTAACGGACCGCCCAAAGAACGACCTAGCGCTGAGGCAGAGAATGAGGAAAGTGACCGACGGAGAA
CCAACTAGGCCGAGAGGGCTCGGTCCCGACCCCTGGTTGGCCCATGGCCTAGCCCGTGAATCTTCCGCCTGCGATCAACGATCCCTCGGGCCCTACAACGCTGAA
TTTGAAGGGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCGCAATGTGCCTCAGCAGGCCAGGCAACAGACCCCGGTTACACCGAATTTGGGGTCTACCCCAGCTACTGGAGCGGTCAACTCAAATATAATTCAG
TGGCCGCATACCATTGCGACCACCACCACGTCAACATATCAGGCCACGGTTGATGTACCAGAGACGGATGATGCCCATTGGGTAGAATTAGGCAAACGGGAAGAT
CCCCCATTCACCGCCCCCATAATGGCATATCCTCTTCCACTGAAAATGAAAAAACCGGACATGAAGCCATATGGCAGATCAACTGACCCAATCGATCACATGGAA
CTGTACGAGTTGAGGAAGGTCTTCATAAGCCAGTTCTCTGCACAGCACGATAGGAAAACGTCTGATACCCATCTCCCCACCGTTTACCAATCAGAGGATGAGGCG
CTGCGTGATTTCGTTGGGAGATTTATGGCAGAGAAAATTAAGGTACCTGACTGCTCAGATGACACAACCAGAATGACATTCACATCGGCTATAAATAATCCAAAC
TTGGTTCATTCTTTTGCCATTCAACTAGCTCGGACTTACAGCGAAGTGATTCAACAAGCACGTCAATATATGCATGCGAAGGATGTACTACGGACAAAACACCTC
CAGCATCAAACAGTAATATCGAGGCAAGCACAAGCTCGAGGGCGAGGTCATTTGAAAAAGTACGTAAGAAAGAAAGACGCCTGCTCTTCTCAAGAGAAGAGGAAA
TTAGATCGACCAGATCGTGATGACCAAGATAAATCTCTCTCACCTAAGAGGAGGGAAGCGGACAAAAAAAGGTCTGACGGGGATTCACCGCTAATAGAAGAATCA
AAGGAACAAGCTTACGGAGCTCCATCTCGGAAGGTTCCGAGATGGAGCATCTGCCACTTCCTATTAAGGATTGACTTGGTATTTCCAGGAAAGTGTAAGAAATTT
CTCCTCGAACCTAATATTGAGTCCGAGCTGCTTATTGACTTGAGCGTCGGAGATTTTGCCCTTGTTATAGAGAACAAAAACGACACGAAACGGGACAAGGAGTTG
AAGCCTGAGATCATCGATTGGGGGAGACCGGCCCGCAACGTAACGGACCGCCCAAAGAACGACCTAGCGCTGAGGCAGAGAATGAGGAAAGTGACCGACGGAGAA
CCAACTAGGCCGAGAGGGCTCGGTCCCGACCCCTGGTTGGCCCATGGCCTAGCCCGTGAATCTTCCGCCTGCGATCAACGATCCCTCGGGCCCTACAACGCTGAA
TTTGAAGGGATGTGA
Protein sequenceShow/hide protein sequence
MDERNVPQQARQQTPVTPNLGSTPATGAVNSNIIQWPHTIATTTTSTYQATVDVPETDDAHWVELGKREDPPFTAPIMAYPLPLKMKKPDMKPYGRSTDPIDHME
LYELRKVFISQFSAQHDRKTSDTHLPTVYQSEDEALRDFVGRFMAEKIKVPDCSDDTTRMTFTSAINNPNLVHSFAIQLARTYSEVIQQARQYMHAKDVLRTKHL
QHQTVISRQAQARGRGHLKKYVRKKDACSSQEKRKLDRPDRDDQDKSLSPKRREADKKRSDGDSPLIEESKEQAYGAPSRKVPRWSICHFLLRIDLVFPGKCKKF
LLEPNIESELLIDLSVGDFALVIENKNDTKRDKELKPEIIDWGRPARNVTDRPKNDLALRQRMRKVTDGEPTRPRGLGPDPWLAHGLARESSACDQRSLGPYNAE
FEGM