CuGenDBv2

Gene ID	Moc06g19210
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Genome location	chr6:14947539..14956561
RNA-Seq Expression	Moc06g19210
Synteny	Moc06g19210
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR022776 - TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain IPR032845 - U11/U12 small nuclear ribonucleoprotein 48kDa protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6588294.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]

0.0e+00

73.64

Show/hide

Query:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N ++P F P NPNPN    P FS  ES+D PLDLSSSL SL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FDRRHR+P HSLF H
Subjt:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+ CPGVV L ++DEMSKVF+LPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ
         D   R M+S+ K   +LPS+LWALR+EVEMWNDYP++YSHIV+RS+LG+++ +D+ L TWIIANSPRYGV+IDVAMRDHI  LFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE NGKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDT++V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT
        K L ++V N   VTGEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEH YISQRACEERKRRCNYRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT

Query:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HSS
         KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  + H+S
Subjt:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HSS

Query:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPS
        SHS+KQS YD+RYSAS KP KG+YGHYGS EDE KSVG DKYD+  Y+R  DRSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS S
Subjt:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPS

Query:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL
        SSRS G SSA K GHK RA D+WKR+TA+NH S SS+LNSFNDRYTP++ HDQLEDD+STG RYVNPDEL
Subjt:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL

XP_022151686.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Momordica charantia]

0.0e+00

100

Show/hide

Query:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
Subjt:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQIA
        KDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQIA
Subjt:  KDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQIA

Query:  LENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQEVR
        LENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQEVR
Subjt:  LENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQEVR

Query:  NYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKTREE
        NYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKTREE
Subjt:  NYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKTREE

Query:  LLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQSYY
        LLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQSYY
Subjt:  LLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQSYY

Query:  DDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPSSSRSAGGSS
        DDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPSSSRSAGGSS
Subjt:  DDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPSSSRSAGGSS

Query:  AMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL
        AMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL
Subjt:  AMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL

XP_022927551.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucurbita moschata]

0.0e+00

73.64

Show/hide

Query:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N ++P F P NPNPN    P FS  ES++ PLDLSSSL SL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FD RHR+PPHSLF H
Subjt:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLC SAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ
         D   REM+S+ K   +LPS+LWALR+EVEMWNDYP++YSHIV+RS+LG+++ +D+ L TWIIANSPRYGV+IDVAMRDHI  LFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE NGKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDT++V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT
        K L ++V N   V+GEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEH YISQRACEERKRRCNYRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT

Query:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHS-S
         KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  +H  S
Subjt:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHS-S

Query:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPS
        SHS+KQS YD+RYSAS KP KG+YGHYGS EDE KSVG DKYD+  Y+R  DRSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS S
Subjt:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPS

Query:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL
        SSRS G SSA KDGHK RA D+WKR+TA+NH S SS+LN FNDRYTP++ HDQLEDD+STG RYVNPDEL
Subjt:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL

XP_023004252.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cucurbita maxima]

0.0e+00

73.51

Show/hide

Query:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N +FP F P NPNPN      FS  +S++ PLDLSSSLSSL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FDRRHR+PPHSLF H
Subjt:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ
         D   REM+S+ K  R+LPS+LWALR EVEMWNDYP++YSHIV+RS+LG+++ +D+ L TWIIANSPRYGV+IDVAMRDHI  LFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE +GKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDTQ+V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT
        K+L  +V N   VTGEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEH YISQRACEERKRRC+YRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT

Query:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HSS
         KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  + HSS
Subjt:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HSS

Query:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPS
        SHS+KQS YD+RYSAS KP KG+ GHYGS EDE K V KDKYD+  Y+R  +RSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS S
Subjt:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPS

Query:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL
        SSRS G SSA KD HK RA D+WKR+TA+NH S S +LNSFNDRYTP++ HDQLEDD+S G RYVNPDEL
Subjt:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL

XP_023530557.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucurbita pepo subsp. pepo]

0.0e+00

74.51

Show/hide

Query:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N +FPNFL  NPNPN    P FS  ES+D PLDLSSSLSSL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FDRRHR+PPHSLF H
Subjt:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ
         D   REM+ + K  R+LPS+LWALR+EVEMWNDYP++YSHIV+RS+LG+++ +D+ L TWIIANSPRYGV+IDVAMRDHI  LFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE NGKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+ SDTQ+V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE-G
        K L ++V N   VTGEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEH YI QRACEERKRRCNYRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE-G

Query:  TGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HS
          KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  + H+
Subjt:  TGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HS

Query:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSP
        SSHS+KQS YD+RYSAS KP KG+YGHYGS EDE KSVGKDKYD+  Y+R  DRSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS 
Subjt:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSP

Query:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPD
        SSSRS G SSA KDGHK RA D+WKR+TA+NH S SS+LNSFNDRYTP++ HDQLEDD+STG RYVNPD
Subjt:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPD

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BCH1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

8.8e-286

69.78

Show/hide

Query:  MNPALPF-PNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFR
        +NP+LPF PNQ+FP+FLP NPNPN  +  + SHSESQ   LDL SS SSL  LIH+ANQTL+SLSYL+    PS   + S  + C FDRRHR+PPHSLFR
Subjt:  MNPALPF-PNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFR

Query:  HSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFV
        HSLLCPSA    IDPT L  SLLYP +L SS  L+NE RF Q LPDSDADLCFSL D+ D++SNFFY DCPGVV L + DEMSKVFTLPRVLAV CANFV
Subjt:  HSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFV

Query:  SKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQI
          D  EM S     RILPS+LW LR+EVE+WNDYP  YS +VLRS+LG++++++ HLMTWII NSPRYGVVIDVA+RDHI  LFRLCFMAI KEA+GFQ+
Subjt:  SKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQI

Query:  ALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKSK
        ALE GN ME GS+    +  FKCP+LIQVLMWLASQLSVLYGETNGKFFA++MLRQCILDAA   LLLP EQK       G G H+ E +CSD Q+VK  
Subjt:  ALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKSK

Query:  RLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTG
         L Q+V N  NVTG ETV C VI VSQVAAA+AALHERFLLEEKIKA+RF+HLQTKYQ VSE+ YISQRACEERKRRCNYRPIIEHDGLPKQQ+++E   
Subjt:  RLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTG

Query:  KTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSH
        KTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVK  EERG+K EQP++HNI R+I+AD +T+GSND  G A+HSS H
Subjt:  KTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSH

Query:  SKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPSSS
        SKKQS++D RY  S+KPQKG Y HYGS EDE K   KDKYD+  Y+R  D+SS PS SHK  RY +DRDDEVP +TRHHE +++ SSSS  HG RS SSS
Subjt:  SKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPSSS

Query:  RSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSR
        RS  GSSA KD HK RA D+WKR+TA+NH S+  + NSF+DRYTP+E HD+LED+YST SR
Subjt:  RSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSR

A0A6J1DFF2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

0.0e+00

100

Show/hide

Query:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
Subjt:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQIA
        KDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQIA
Subjt:  KDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQIA

Query:  LENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQEVR
        LENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQEVR
Subjt:  LENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQEVR

Query:  NYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKTREE
        NYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKTREE
Subjt:  NYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKTREE

Query:  LLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQSYY
        LLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQSYY
Subjt:  LLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQSYY

Query:  DDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPSSSRSAGGSS
        DDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPSSSRSAGGSS
Subjt:  DDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPSSSRSAGGSS

Query:  AMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL
        AMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL
Subjt:  AMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL

A0A6J1EI02 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

0.0e+00

73.64

Show/hide

Query:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N ++P F P NPNPN    P FS  ES++ PLDLSSSL SL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FD RHR+PPHSLF H
Subjt:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLC SAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ
         D   REM+S+ K   +LPS+LWALR+EVEMWNDYP++YSHIV+RS+LG+++ +D+ L TWIIANSPRYGV+IDVAMRDHI  LFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE NGKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDT++V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT
        K L ++V N   V+GEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEH YISQRACEERKRRCNYRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT

Query:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHS-S
         KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  +H  S
Subjt:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHS-S

Query:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPS
        SHS+KQS YD+RYSAS KP KG+YGHYGS EDE KSVG DKYD+  Y+R  DRSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS S
Subjt:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPS

Query:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL
        SSRS G SSA KDGHK RA D+WKR+TA+NH S SS+LN FNDRYTP++ HDQLEDD+STG RYVNPDEL
Subjt:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL

A0A6J1KPX5 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2

0.0e+00

73.51

Show/hide

Query:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N +FP F P NPNPN      FS  +S++ PLDLSSSLSSL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FDRRHR+PPHSLF H
Subjt:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ
         D   REM+S+ K  R+LPS+LWALR EVEMWNDYP++YSHIV+RS+LG+++ +D+ L TWIIANSPRYGV+IDVAMRDHI  LFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE +GKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDTQ+V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT
        K+L  +V N   VTGEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEH YISQRACEERKRRC+YRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT

Query:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HSS
         KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  + HSS
Subjt:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HSS

Query:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPS
        SHS+KQS YD+RYSAS KP KG+ GHYGS EDE K V KDKYD+  Y+R  +RSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS S
Subjt:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSPS

Query:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL
        SSRS G SSA KD HK RA D+WKR+TA+NH S S +LNSFNDRYTP++ HDQLEDD+S G RYVNPDEL
Subjt:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL

A0A6J1KU07 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1

3.4e-309

73.41

Show/hide

Query:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N +FP F P NPNPN      FS  +S++ PLDLSSSLSSL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FDRRHR+PPHSLF H
Subjt:  MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ
         D   REM+S+ K  R+LPS+LWALR EVEMWNDYP++YSHIV+RS+LG+++ +D+ L TWIIANSPRYGV+IDVAMRDHI  LFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE +GKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDTQ+V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE-G
        K+L  +V N   VTGEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEH YISQRACEERKRRC+YRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE-G

Query:  TGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HS
          KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  + HS
Subjt:  TGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HS

Query:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSP
        SSHS+KQS YD+RYSAS KP KG+ GHYGS EDE K V KDKYD+  Y+R  +RSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS 
Subjt:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSSSNFHGFRSP

Query:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL
        SSSRS G SSA KD HK RA D+WKR+TA+NH S S +LNSFNDRYTP++ HDQLEDD+S G RYVNPDEL
Subjt:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL

SwissProt top hits

e value

%identity

Alignment

Q9M8X2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

7.5e-117

39.53

Show/hide

Query:  PALPF---PNQS-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD
        P+LP    PN + F ++ P N NPN F  P          +S   S     +LS +LSSLK+L+    +TL SLS  L+L  +     D++  FV+C FD
Subjt:  PALPF---PNQS-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD

Query:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT
          H +PP +LF HSL CP+     +D  HLL S   Y ++L+   +L         L + D DLC SL+D AD  SNFFY DCPG V   + D   +  T
Subjt:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT

Query:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRL
        LP VL+VEC++FV  D +  +    K   +LPS+L A++NE++ W D+P+ YS  VL S++G+K+V    L  WI+ NS RYGV+ID  MRDHI  LFRL
Subjt:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRL

Query:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS
        C  + +KEA GF++   +  ++ +  ++   S  F+CPV IQVL WLASQL+VLYGE NGKFFA+ M +QCI+++AS ++L  LE      S   E    
Subjt:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS

Query:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDG
        D   +++K ++ E + ++N +G E      +  VI VS+V+AA+AAL+ER LLEEKI+AVR++   T+YQ  +E  +++ +A EER RRC+YRPII+HDG
Subjt:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDG

Query:  LPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSN
         P+Q++ ++   K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  AGGIGCF     E+G+  +        R  I ++  +  +
Subjt:  LPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSN

Query:  DTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSS
        D   +   +    K ++  D  Y   N+    +   +    DE  S    +    R Y+  DR        +++++   RDDE  T+T+ H       S 
Subjt:  DTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSS

Query:  SNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTE
         N+   R  SSS            +K++  D + R +           N F DRY PTE
Subjt:  SNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTE

Arabidopsis top hits

e value

%identity

Alignment

AT3G04160.1 unknown protein

5.3e-118

39.53

Show/hide

Query:  PALPF---PNQS-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD
        P+LP    PN + F ++ P N NPN F  P          +S   S     +LS +LSSLK+L+    +TL SLS  L+L  +     D++  FV+C FD
Subjt:  PALPF---PNQS-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD

Query:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT
          H +PP +LF HSL CP+     +D  HLL S   Y ++L+   +L         L + D DLC SL+D AD  SNFFY DCPG V   + D   +  T
Subjt:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT

Query:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRL
        LP VL+VEC++FV  D +  +    K   +LPS+L A++NE++ W D+P+ YS  VL S++G+K+V    L  WI+ NS RYGV+ID  MRDHI  LFRL
Subjt:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRL

Query:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS
        C  + +KEA GF++   +  ++ +  ++   S  F+CPV IQVL WLASQL+VLYGE NGKFFA+ M +QCI+++AS ++L  LE      S   E    
Subjt:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS

Query:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDG
        D   +++K ++ E + ++N +G E      +  VI VS+V+AA+AAL+ER LLEEKI+AVR++   T+YQ  +E  +++ +A EER RRC+YRPII+HDG
Subjt:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDG

Query:  LPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSN
         P+Q++ ++   K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  AGGIGCF     E+G+  +        R  I ++  +  +
Subjt:  LPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSN

Query:  DTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSS
        D   +   +    K ++  D  Y   N+    +   +    DE  S    +    R Y+  DR        +++++   RDDE  T+T+ H       S 
Subjt:  DTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITSSS

Query:  SNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTE
         N+   R  SSS            +K++  D + R +           N F DRY PTE
Subjt:  SNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTE

AT3G04160.2 unknown protein

4.2e-115

39.16

Show/hide

Query:  PALPF---PNQS-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD
        P+LP    PN + F ++ P N NPN F  P          +S   S     +LS +LSSLK+L+    +TL SLS  L+L  +     D++  FV+C FD
Subjt:  PALPF---PNQS-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD

Query:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT
          H +PP +LF HSL CP+     +D  HLL S   Y ++L+   +L         L + D DLC SL+D AD  SNFFY DCPG V   + D   +  T
Subjt:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT

Query:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRL
        LP VL+VEC++FV  D +  +    K   +LPS+L A++NE++ W D+P+ YS  VL S++G+K+V    L  WI+ NS RYGV+ID  MRDHI  LFRL
Subjt:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRL

Query:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS
        C  + +KEA GF++   +  ++ +  ++   S  F+CPV IQVL WLASQL+VLYGE NGKFFA+ M +QCI+++AS ++L  LE      S   E    
Subjt:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS

Query:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSE--HKYISQRACEERKRRCNYRPIIEH
        D   +++K ++ E + ++N +G E      +  VI VS+V+AA+AAL+ER LLEEKI+AVR++   T+YQ +    H  +      ER RRC+YRPII+H
Subjt:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSE--HKYISQRACEERKRRCNYRPIIEH

Query:  DGLPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKG
        DG P+Q++ ++   K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  AGGIGCF     E+G+  +        R  I ++  + 
Subjt:  DGLPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKG

Query:  SNDTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITS
         +D   +   +    K ++  D  Y   N+    +   +    DE  S    +    R Y+  DR        +++++   RDDE  T+T+ H       
Subjt:  SNDTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAREITS

Query:  SSSNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTE
        S  N+   R  SSS            +K++  D + R +           N F DRY PTE
Subjt:  SSSNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAACCCTGCTCTTCCATTTCCCAACCAAAGTTTCCCAAATTTTCTGCCCCAAAACCCTAACCCTAATTTATTTGTCAGCCCTGAATTCTCACATTCTGAGTCTCAAGA
TCTTCCACTCGACTTGTCTTCTTCGCTCTCCTCCCTCAAAAACCTCATCCATGTCGCCAATCAGACCCTTCAATCTCTCTCCTACCTCAGCCTCACCCGAAACCCATCTG
ATAATGGCGACGATTCCGACTTCGTTCAGTGTGCTTTTGATCGGCGCCACCGTCTGCCGCCGCATTCTCTCTTCCGCCACTCCCTCCTCTGCCCTTCCGCTCCCCAGCCT
CGAATTGACCCGACCCACCTCCTCCACTCCTTGCTTTACCCCCACTCTCTTCAATCATCTCGTGATTTGATTAATGAGAAGCGTTTCCATCAAGCTCTGCCGGATTCTGA
TGCCGACCTTTGCTTCTCTCTCAATGATTTTGCGGATAGTAGTTCCAATTTCTTCTATGTTGATTGCCCTGGTGTGGTTACCTTGTGTGACCAGGATGAAATGTCCAAGG
TTTTCACTCTTCCTCGTGTTTTGGCTGTTGAATGTGCAAATTTTGTCAGTAAGGACGGTCGAGAGATGGAGAGTGCGTGGAAGGAGACTCGAATACTTCCCTCCGAGTTG
TGGGCTCTTAGAAATGAGGTTGAAATGTGGAATGACTATCCCACTATGTATTCGCACATTGTTCTCCGTTCTCTATTGGGCACAAAATTGGTCATTGACGACCATTTGAT
GACATGGATCATTGCGAATTCGCCTCGGTATGGTGTTGTTATTGATGTTGCTATGAGGGATCATATACTTCCGCTGTTCAGGCTGTGTTTTATGGCAATCTTAAAAGAAG
CTGTGGGATTTCAGATTGCTCTGGAAAATGGAAATGAAATGGAGGATGGATCCCTAATTATCTCAGGCAGCCACAATTTTAAGTGTCCAGTTTTGATTCAAGTATTAATG
TGGCTAGCATCTCAGCTTTCTGTGTTGTATGGGGAAACAAACGGGAAGTTCTTTGCCATTCACATGCTTAGACAATGTATATTAGATGCTGCATCAGGCTTGTTACTTTT
ACCACTGGAACAAAAGCCGGGACATGGTTCTCATAATCAGGAATCTACCTGTAGTGACACACAGAATGTGAAGTCGAAAAGATTGGTTCAGGAAGTTAGAAATTATGACA
ATGTTACTGGAGAAGAAACTGTTACTTGTACTGTGATTTTTGTGTCCCAAGTGGCTGCGGCTATTGCAGCATTGCATGAACGTTTCCTACTTGAAGAAAAGATCAAGGCT
GTACGCTTTTCTCATCTGCAAACTAAATATCAGCTGGTTTCTGAGCATAAATATATCTCTCAAAGAGCTTGTGAAGAGCGTAAAAGACGTTGCAACTATAGGCCTATAAT
TGAGCATGATGGACTTCCAAAGCAGCAGGCTCATGATGAGGGTACAGGGAAGACCAAAACAAGGGAGGAATTGTTAGCTGAAGAAAGGGATTATAAACGTCGAAGAATGT
CATACCGTGGAAAAAAGGCAAAGCGATCAACTTTACAGGTTACAAGAGATATTATTGAGGAATACATGGAGGAAATTATGAAAGCTGGAGGAATTGGGTGCTTTGTTAAG
AGATCTGAAGAGAGAGGGGTAAAATATGAACAACCAGCTGAGCATAACATTAAAAGAGATATTATTGCTGATGAATACACAAAAGGAAGCAACGACACATATGGAGCAGC
CAAACATAGCTCAAGTCATTCCAAGAAGCAGTCTTACTATGATGACAGATATTCAGCTTCCAATAAGCCACAAAAAGGTCAGTATGGGCACTATGGCTCTCTAGAAGATG
AAGGGAAAAGTGTCGGTAAGGACAAATATGATCAAGGTCGCTATTATAGATCCTTAGATCGAAGCAGTAGTCCTAGCCTGTCGCACAAACGGAATAGATATCTAAGTGAT
CGAGATGATGAGGTGCCAACGAAAACCAGGCATCATGAAGCAAGAGAAATAACTTCTAGCAGTTCTAATTTTCATGGTTTTAGGTCACCTTCATCCTCCAGATCTGCCGG
TGGTTCAAGTGCAATGAAGGATGGCCATAAATCGAGAGCTGGTGATAATTGGAAAAGGAGCACGGCTAATAATCATGGTTCAAAGTCTTCGATGCTTAATTCATTTAATG
ATAGGTACACCCCCACCGAATGGCATGACCAATTGGAAGATGATTACTCCACCGGCAGCAGATATGTAAATCCAGATGAACTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNPALPFPNQSFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRHSLLCPSAPQP
RIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVSKDGREMESAWKETRILPSEL
WALRNEVEMWNDYPTMYSHIVLRSLLGTKLVIDDHLMTWIIANSPRYGVVIDVAMRDHILPLFRLCFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLM
WLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKA
VRFSHLQTKYQLVSEHKYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVK
RSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSD
RDDEVPTKTRHHEAREITSSSSNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYTPTEWHDQLEDDYSTGSRYVNPDEL

Moc06g19210 (gene) of Bitter gourd (OHB3-1) v2 genome