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Moc06g19640 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g19640
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein SPIRRIG
Genome locationchr6:15434347..15441170
RNA-Seq ExpressionMoc06g19640
SyntenyMoc06g19640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]9.8e-1262.32Show/hide
Query:  RRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEK
        ++  SP P+GGK++ + ++ EPI LDK KPAD+PE SEK+ +QK+K FDLE+LLDQA+SPFTEEIM EK
Subjt:  RRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEK

XP_022145129.1 uncharacterized protein LOC111014646 [Momordica charantia]1.0e-2948.17Show/hide
Query:  GEPENEANRQNPERQEGPPEVPTITAPEQLQNQFTALEEKAEDMFQRMTQLLQQLEQREAGEI--------------------FNSRG------------
        G PE+  ++ N ERQEG PE   +T PE LQ QF  LE+K E M QRMTQ+L+Q E++E+ E+                     NS G            
Subjt:  GEPENEANRQNPERQEGPPEVPTITAPEQLQNQFTALEEKAEDMFQRMTQLLQQLEQREAGEI--------------------FNSRG------------

Query:  -----QQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQ
              QK K++     P+GG+++ D +N EP+ LDK KPADQPE SEK+ +QKEK FDLE+LLDQA+SPFTEEIM EKV PKFKLP VKQ
Subjt:  -----QQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQ

XP_022155816.1 protein SPIRRIG [Momordica charantia]5.2e-2958.27Show/hide
Query:  EVPTITAPEQLQNQFTALEEKAEDMFQRMTQLLQQLEQREAGEIFNSRGQQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEK
        EVP    P + +    +  E++ +      +L + +++R   + F+SRGQQKDK++Q SPVPDGGK+N DKQN EPIDLDK K  D+PELSE+QQS+KEK
Subjt:  EVPTITAPEQLQNQFTALEEKAEDMFQRMTQLLQQLEQREAGEIFNSRGQQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEK

Query:  RFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQSDGL
         FDLE+LLDQA+SPF EEIMGEKV PKFKLP VKQ D L
Subjt:  RFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQSDGL

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.1e-3651.78Show/hide
Query:  GEPENEANRQNPERQEGPPEVPTITAPEQLQNQFTALEEKAED--MFQRMTQLLQQLEQREAGEIFNSRGQ-----------------QKDKRRQNSPVP
        G PE+  ++ N ERQEG  E   +T PE  Q QF  LE+K  D     R  +  +   + +  E  NS G                  +K K++  SP P
Subjt:  GEPENEANRQNPERQEGPPEVPTITAPEQLQNQFTALEEKAED--MFQRMTQLLQQLEQREAGEIFNSRGQ-----------------QKDKRRQNSPVP

Query:  DGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQSDGLVDPVDHLDAYREWMDIYGMS
        +GGK++ D +N EPI LDK KPAD+PE SEK+ S KEK FDLE+LLDQA+SPFTEEIM EKV PKFKLP VKQ D   DPVDHLDAYREWMDIYG+S
Subjt:  DGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQSDGLVDPVDHLDAYREWMDIYGMS

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]3.6e-3062.9Show/hide
Query:  LEQREAGEIFNSRGQQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQ
        L +R    IF+S   QK K++  S  P+G KN+ D +N EPI L+K KP D+PE SEK+ +QKEK FDLE+LL QA+SPFTEEIM EKV PKFKLP VK 
Subjt:  LEQREAGEIFNSRGQQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQ

Query:  SDGLVDPVDHLDAYREWMDIYGMS
         DG+ +PVDHLDAYREWMDIYG+S
Subjt:  SDGLVDPVDHLDAYREWMDIYGMS

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128054.7e-1262.32Show/hide
Query:  RRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEK
        ++  SP P+GGK++ + ++ EPI LDK KPAD+PE SEK+ +QK+K FDLE+LLDQA+SPFTEEIM EK
Subjt:  RRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEK

A0A6J1CUA7 uncharacterized protein LOC1110146465.0e-3048.17Show/hide
Query:  GEPENEANRQNPERQEGPPEVPTITAPEQLQNQFTALEEKAEDMFQRMTQLLQQLEQREAGEI--------------------FNSRG------------
        G PE+  ++ N ERQEG PE   +T PE LQ QF  LE+K E M QRMTQ+L+Q E++E+ E+                     NS G            
Subjt:  GEPENEANRQNPERQEGPPEVPTITAPEQLQNQFTALEEKAEDMFQRMTQLLQQLEQREAGEI--------------------FNSRG------------

Query:  -----QQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQ
              QK K++     P+GG+++ D +N EP+ LDK KPADQPE SEK+ +QKEK FDLE+LLDQA+SPFTEEIM EKV PKFKLP VKQ
Subjt:  -----QQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQ

A0A6J1DSV3 protein SPIRRIG2.5e-2958.27Show/hide
Query:  EVPTITAPEQLQNQFTALEEKAEDMFQRMTQLLQQLEQREAGEIFNSRGQQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEK
        EVP    P + +    +  E++ +      +L + +++R   + F+SRGQQKDK++Q SPVPDGGK+N DKQN EPIDLDK K  D+PELSE+QQS+KEK
Subjt:  EVPTITAPEQLQNQFTALEEKAEDMFQRMTQLLQQLEQREAGEIFNSRGQQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEK

Query:  RFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQSDGL
         FDLE+LLDQA+SPF EEIMGEKV PKFKLP VKQ D L
Subjt:  RFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQSDGL

A0A6J1DWY0 uncharacterized protein LOC1110252935.6e-3751.78Show/hide
Query:  GEPENEANRQNPERQEGPPEVPTITAPEQLQNQFTALEEKAED--MFQRMTQLLQQLEQREAGEIFNSRGQ-----------------QKDKRRQNSPVP
        G PE+  ++ N ERQEG  E   +T PE  Q QF  LE+K  D     R  +  +   + +  E  NS G                  +K K++  SP P
Subjt:  GEPENEANRQNPERQEGPPEVPTITAPEQLQNQFTALEEKAED--MFQRMTQLLQQLEQREAGEIFNSRGQ-----------------QKDKRRQNSPVP

Query:  DGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQSDGLVDPVDHLDAYREWMDIYGMS
        +GGK++ D +N EPI LDK KPAD+PE SEK+ S KEK FDLE+LLDQA+SPFTEEIM EKV PKFKLP VKQ D   DPVDHLDAYREWMDIYG+S
Subjt:  DGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQSDGLVDPVDHLDAYREWMDIYGMS

A0A6J1E1E7 uncharacterized protein LOC1110255481.7e-3062.9Show/hide
Query:  LEQREAGEIFNSRGQQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQ
        L +R    IF+S   QK K++  S  P+G KN+ D +N EPI L+K KP D+PE SEK+ +QKEK FDLE+LL QA+SPFTEEIM EKV PKFKLP VK 
Subjt:  LEQREAGEIFNSRGQQKDKRRQNSPVPDGGKNNQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQ

Query:  SDGLVDPVDHLDAYREWMDIYGMS
         DG+ +PVDHLDAYREWMDIYG+S
Subjt:  SDGLVDPVDHLDAYREWMDIYGMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGTAGATGAGGAAGAAACCTATGTTGAAACTCCTTCTTCACCCTTGGAAATGGTGGAGAGATCAGAGGAAAGGAAGGCTCAACCCGTCATGGAAGAAACCCAACC
CATTCATTTAGGGACCACAGAGGAACCCCAAGAGATTCAGAATACTGCCTTCCGTTTCCTCCTTCTTTCTGCTGATGTCGGCTCACGTTGCTCCGCAAGTAGGAATAAGA
GCATTGGGGAGGGGCCTATCTGCACGACTCTGAACGAATTCGTACAGGCTATTCAAGGAGCGGGTCGAGTTCGTATCGCCACAGAGCAACAGCCGCGTCCGGGAACTAAG
CTAGTGAGTGCACCGGAAAAGAACGAGAACTGGGTTAATCTATTCTATGGTGAAGCATCTAAGGCTACGTTCGGAGAACCTGAGAACGAGGCGAATCGACAAAACCCGGA
GCGCCAAGAAGGGCCACCTGAGGTGCCTACAATAACAGCTCCCGAACAGCTCCAAAATCAATTCACGGCCTTGGAAGAAAAGGCGGAGGACATGTTTCAGCGCATGACCC
AGCTACTTCAACAGTTAGAACAACGAGAAGCCGGCGAGATTTTCAATTCCAGAGGTCAGCAAAAGGACAAAAGGCGACAGAACTCCCCGGTACCAGATGGGGGCAAGAAC
AACCAAGATAAACAAAATGTTGAGCCCATAGACCTCGACAAACACAAACCGGCAGATCAGCCCGAGTTGTCAGAAAAGCAACAAAGTCAAAAGGAAAAGAGGTTCGATCT
CGAAAAGCTACTGGATCAAGCCAACTCGCCATTTACAGAAGAAATCATGGGGGAGAAAGTCCTTCCAAAATTCAAACTACCAATGGTAAAACAATCTGACGGGTTGGTCG
ACCCAGTAGACCACCTCGATGCTTACCGAGAATGGATGGATATTTACGGGATGTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGGTAGATGAGGAAGAAACCTATGTTGAAACTCCTTCTTCACCCTTGGAAATGGTGGAGAGATCAGAGGAAAGGAAGGCTCAACCCGTCATGGAAGAAACCCAACC
CATTCATTTAGGGACCACAGAGGAACCCCAAGAGATTCAGAATACTGCCTTCCGTTTCCTCCTTCTTTCTGCTGATGTCGGCTCACGTTGCTCCGCAAGTAGGAATAAGA
GCATTGGGGAGGGGCCTATCTGCACGACTCTGAACGAATTCGTACAGGCTATTCAAGGAGCGGGTCGAGTTCGTATCGCCACAGAGCAACAGCCGCGTCCGGGAACTAAG
CTAGTGAGTGCACCGGAAAAGAACGAGAACTGGGTTAATCTATTCTATGGTGAAGCATCTAAGGCTACGTTCGGAGAACCTGAGAACGAGGCGAATCGACAAAACCCGGA
GCGCCAAGAAGGGCCACCTGAGGTGCCTACAATAACAGCTCCCGAACAGCTCCAAAATCAATTCACGGCCTTGGAAGAAAAGGCGGAGGACATGTTTCAGCGCATGACCC
AGCTACTTCAACAGTTAGAACAACGAGAAGCCGGCGAGATTTTCAATTCCAGAGGTCAGCAAAAGGACAAAAGGCGACAGAACTCCCCGGTACCAGATGGGGGCAAGAAC
AACCAAGATAAACAAAATGTTGAGCCCATAGACCTCGACAAACACAAACCGGCAGATCAGCCCGAGTTGTCAGAAAAGCAACAAAGTCAAAAGGAAAAGAGGTTCGATCT
CGAAAAGCTACTGGATCAAGCCAACTCGCCATTTACAGAAGAAATCATGGGGGAGAAAGTCCTTCCAAAATTCAAACTACCAATGGTAAAACAATCTGACGGGTTGGTCG
ACCCAGTAGACCACCTCGATGCTTACCGAGAATGGATGGATATTTACGGGATGTCATAG
Protein sequenceShow/hide protein sequence
MQVDEEETYVETPSSPLEMVERSEERKAQPVMEETQPIHLGTTEEPQEIQNTAFRFLLLSADVGSRCSASRNKSIGEGPICTTLNEFVQAIQGAGRVRIATEQQPRPGTK
LVSAPEKNENWVNLFYGEASKATFGEPENEANRQNPERQEGPPEVPTITAPEQLQNQFTALEEKAEDMFQRMTQLLQQLEQREAGEIFNSRGQQKDKRRQNSPVPDGGKN
NQDKQNVEPIDLDKHKPADQPELSEKQQSQKEKRFDLEKLLDQANSPFTEEIMGEKVLPKFKLPMVKQSDGLVDPVDHLDAYREWMDIYGMS