; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g19740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g19740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUBN2_3 domain-containing protein
Genome locationchr6:15491485..15491922
RNA-Seq ExpressionMoc06g19740
SyntenyMoc06g19740
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152756.1 uncharacterized protein LOC111020399 [Momordica charantia]2.8e-3058.62Show/hide
Query:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR
        M+I L+VKNK+GFVD S+++ TG+LL SWI  N+VVI+WILNS+ K ISAS++F DSA +IWLDLKE F+ +N P IFQL+RDL+ + QDQ S+S YFT 
Subjt:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR

Query:  LKQIMDEYDTYRPGCS
        LK +  E ++Y P C+
Subjt:  LKQIMDEYDTYRPGCS

XP_022154608.1 uncharacterized protein LOC111021831 [Momordica charantia]1.5e-3463.56Show/hide
Query:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR
        M+I LS+KNKLGF+D S+ +  GELLP+WI NNHVVIAWILNS+ K IS+S++F +SA DIW+DLKE F+  N P IFQLKRDLA + Q+QQS+S+YFT+
Subjt:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR

Query:  LKQIMDEYDTYRPGCSSS
        LK + DE   YRP CS S
Subjt:  LKQIMDEYDTYRPGCSSS

XP_022154973.1 uncharacterized protein LOC111022117 [Momordica charantia]6.5e-3564.66Show/hide
Query:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR
        M I LS+KNKLGF++ SL K  G+LLP WI N HVVIAW LNS+ K ISASLIF +S  +IWLDLK+ FQ +N P IFQL+RDLAT+TQDQ S++MY+T+
Subjt:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR

Query:  LKQIMDEYDTYRPGCS
        LK + DEY +YRPGC+
Subjt:  LKQIMDEYDTYRPGCS

XP_022156861.1 uncharacterized protein LOC111023702 [Momordica charantia]8.3e-3062.62Show/hide
Query:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR
        MMI LSVKNKL F+D  + + +G+LLP+WI NNH+VIAWILNS+ K ISAS++F +SA DIW+DL E F+  N P I+QLKR LAT+ QDQQS+S YFT+
Subjt:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR

Query:  LKQIMDE
        LK + DE
Subjt:  LKQIMDE

XP_038895765.1 uncharacterized protein LOC120083929 [Benincasa hispida]4.8e-3056.03Show/hide
Query:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR
        M++ L ++NKLGF+D SL + TG+LL  WI NN+VV++WIL S+ KSIS+S++F +SA  IWLDL++ FQ RN P IF LKR+L+++ QDQ S++MYFT+
Subjt:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR

Query:  LKQIMDEYDTYRPGCS
        +K   DEY +YRPGC+
Subjt:  LKQIMDEYDTYRPGCS

TrEMBL top hitse value%identityAlignment
A0A5J5BIH5 Uncharacterized protein6.8e-3058.82Show/hide
Query:  MMIPLSVKNKLGFVDSSLLKLTG---ELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMY
        M+I LSVKNKLGFVD S+ +  G   +L+ SWI NN++VI+WILNS+ K ISAS+IF  SA +IWLDL++ FQ RN P IFQLKR+L  + Q+Q S+S+Y
Subjt:  MMIPLSVKNKLGFVDSSLLKLTG---ELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMY

Query:  FTRLKQIMDEYDTYRPGCS
        FT+LK I +E   YRP CS
Subjt:  FTRLKQIMDEYDTYRPGCS

A0A6J1DIP8 uncharacterized protein LOC1110203991.4e-3058.62Show/hide
Query:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR
        M+I L+VKNK+GFVD S+++ TG+LL SWI  N+VVI+WILNS+ K ISAS++F DSA +IWLDLKE F+ +N P IFQL+RDL+ + QDQ S+S YFT 
Subjt:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR

Query:  LKQIMDEYDTYRPGCS
        LK +  E ++Y P C+
Subjt:  LKQIMDEYDTYRPGCS

A0A6J1DKR8 uncharacterized protein LOC1110218317.0e-3563.56Show/hide
Query:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR
        M+I LS+KNKLGF+D S+ +  GELLP+WI NNHVVIAWILNS+ K IS+S++F +SA DIW+DLKE F+  N P IFQLKRDLA + Q+QQS+S+YFT+
Subjt:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR

Query:  LKQIMDEYDTYRPGCSSS
        LK + DE   YRP CS S
Subjt:  LKQIMDEYDTYRPGCSSS

A0A6J1DLQ9 uncharacterized protein LOC1110221173.2e-3564.66Show/hide
Query:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR
        M I LS+KNKLGF++ SL K  G+LLP WI N HVVIAW LNS+ K ISASLIF +S  +IWLDLK+ FQ +N P IFQL+RDLAT+TQDQ S++MY+T+
Subjt:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR

Query:  LKQIMDEYDTYRPGCS
        LK + DEY +YRPGC+
Subjt:  LKQIMDEYDTYRPGCS

A0A6J1DW89 uncharacterized protein LOC1110237024.0e-3062.62Show/hide
Query:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR
        MMI LSVKNKL F+D  + + +G+LLP+WI NNH+VIAWILNS+ K ISAS++F +SA DIW+DL E F+  N P I+QLKR LAT+ QDQQS+S YFT+
Subjt:  MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTR

Query:  LKQIMDE
        LK + DE
Subjt:  LKQIMDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1.0e-0933.04Show/hide
Query:  LSVKNKLGFVDSSLLKLT--GELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHF-QCRNVPLIFQLKRDLATVTQDQQSISMYFTRL
        L V  K GF+D +L K      L   W   N +V+ W++NS+   +  S+++ ++A  +W DL+  F  C ++  I+QL+R LAT+ Q   S+  YF +L
Subjt:  LSVKNKLGFVDSSLLKLT--GELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHF-QCRNVPLIFQLKRDLATVTQDQQSISMYFTRL

Query:  KQIMDEYDTYRP
         ++  E   Y P
Subjt:  KQIMDEYDTYRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATCCCTCTTTCCGTCAAGAATAAATTAGGATTTGTGGATAGCTCACTTCTGAAACTGACCGGTGAATTACTTCCCTCTTGGATTTGCAATAACCATGTC
GTTATTGCTTGGATTTTGAATTCTATTCCAAAATCAATTTCCGCTAGTCTCATTTTCATTGATTCGGCGTGCGATATTTGGTTAGACTTAAAAGAGCATTTTCAG
TGCCGAAATGTCCCTCTAATTTTCCAACTCAAGCGAGATTTAGCCACAGTTACTCAGGATCAACAGTCCATCTCCATGTATTTCACTCGGCTCAAACAAATTATG
GATGAATATGATACTTATAGACCTGGTTGTTCATCATCGGACTCAATGAATCTTTTGCAACAACCAGAGCTCAAATCTTGCTCATGGAACCTTCACCTTCGATCG
GTAAAGCTTTCTCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATCCCTCTTTCCGTCAAGAATAAATTAGGATTTGTGGATAGCTCACTTCTGAAACTGACCGGTGAATTACTTCCCTCTTGGATTTGCAATAACCATGTC
GTTATTGCTTGGATTTTGAATTCTATTCCAAAATCAATTTCCGCTAGTCTCATTTTCATTGATTCGGCGTGCGATATTTGGTTAGACTTAAAAGAGCATTTTCAG
TGCCGAAATGTCCCTCTAATTTTCCAACTCAAGCGAGATTTAGCCACAGTTACTCAGGATCAACAGTCCATCTCCATGTATTTCACTCGGCTCAAACAAATTATG
GATGAATATGATACTTATAGACCTGGTTGTTCATCATCGGACTCAATGAATCTTTTGCAACAACCAGAGCTCAAATCTTGCTCATGGAACCTTCACCTTCGATCG
GTAAAGCTTTCTCGCTAA
Protein sequenceShow/hide protein sequence
MMIPLSVKNKLGFVDSSLLKLTGELLPSWICNNHVVIAWILNSIPKSISASLIFIDSACDIWLDLKEHFQCRNVPLIFQLKRDLATVTQDQQSISMYFTRLKQIM
DEYDTYRPGCSSSDSMNLLQQPELKSCSWNLHLRSVKLSR