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Moc06g19800 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g19800
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTranscription factor MYB34
Genome locationchr6:15541979..15543410
RNA-Seq ExpressionMoc06g19800
SyntenyMoc06g19800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3453226.1 transcription factor MYB34 [Gossypium australe]1.5e-1632.75Show/hide
Query:  NMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQ-IKEMATMNEMLKEMALE
        N+      N  N I +ADNRD A+R+Y+   F  L+  I+   +EA  FELK +MFQMLQT+GQF G   +DPH H + F++     AT+   +    + 
Subjt:  NMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQ-IKEMATMNEMLKEMALE

Query:  RKNTLVQLVMRATGTFTPIQTRTIWGGDTISN------------------FHGEL-------------VQTNSTSLENMME-YMGRNDAAMRNLERQMRQ
          + L  L  +    F  I       G                       FH E+             +  +  SLEN+++ YM +ND  +RNLE Q+ Q
Subjt:  RKNTLVQLVMRATGTFTPIQTRTIWGGDTISN------------------FHGEL-------------VQTNSTSLENMME-YMGRNDAAMRNLERQMRQ

Query:  LANDLKARPQGSFPGHTKVPKREGKVQCK
        LAN+L  RPQG    +T+ P+   K QCK
Subjt:  LANDLKARPQGSFPGHTKVPKREGKVQCK

XP_022150327.1 uncharacterized protein LOC111018524 [Momordica charantia]3.1e-4187Show/hide
Query:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI
        MDEIPP+NP DPP+V GNMA +QQNNEFNHI MADNRDVAMREYAAT FQNLD VIL+ I EAAN ELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI
Subjt:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI

XP_022155016.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022160 [Momordica charantia]9.4e-2261Show/hide
Query:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI
        MDEIPP+NP DPPVV GNMA+                           FQNLD  IL+ I +AANFELKPLMFQMLQTLGQFGGREH+DPHDHLKTF QI
Subjt:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]2.4e-3330.16Show/hide
Query:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI
        M +IPPR+P DPP V GNM    +N+EFN+IQMADNRDVAMREYAAT FQN D  I++ I    NFELKP+MFQMLQT+G FGG+EHEDPHDHLK+F+QI
Subjt:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------KEMATMNEMLKEMALERKN---TLVQ
                                                                                  KEM TMN+ LKEMAL  KN   T +Q
Subjt:  --------------------------------------------------------------------------KEMATMNEMLKEMALERKN---TLVQ

Query:  LVMRATGTFTPI-----------QTRTIWGGDTISNFHGE--------------------------------LVQTNSTSLENMM-EYMGRND-------
         V     T  P+                WGG   S+   +                                 +Q N+++LENMM EYM R D       
Subjt:  LVMRATGTFTPI-----------QTRTIWGGDTISNFHGE--------------------------------LVQTNSTSLENMM-EYMGRND-------

Query:  AAMRNLERQMRQLANDLKARPQGSFPGHTKVPKREGKVQCK
        A+MRN   Q+  LAN+LK RPQGSFPGHT++P+REGK QCK
Subjt:  AAMRNLERQMRQLANDLKARPQGSFPGHTKVPKREGKVQCK

XP_022158836.1 uncharacterized protein LOC111025302 [Momordica charantia]7.7e-1650.49Show/hide
Query:  DEIPPRNPTDPPVVKGNMASRQQNNEF----NHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTF
        D  PP+NP     V G+MA  +  N      N I +ADNRDVAMR Y    F NL+  I + + +AA FELKP+MFQ+LQT+GQFGG  +EDP+ HLK+F
Subjt:  DEIPPRNPTDPPVVKGNMASRQQNNEF----NHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTF

Query:  LQI
        ++I
Subjt:  LQI

TrEMBL top hitse value%identityAlignment
A0A5B6U8V7 Transcription factor MYB347.5e-1732.75Show/hide
Query:  NMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQ-IKEMATMNEMLKEMALE
        N+      N  N I +ADNRD A+R+Y+   F  L+  I+   +EA  FELK +MFQMLQT+GQF G   +DPH H + F++     AT+   +    + 
Subjt:  NMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQ-IKEMATMNEMLKEMALE

Query:  RKNTLVQLVMRATGTFTPIQTRTIWGGDTISN------------------FHGEL-------------VQTNSTSLENMME-YMGRNDAAMRNLERQMRQ
          + L  L  +    F  I       G                       FH E+             +  +  SLEN+++ YM +ND  +RNLE Q+ Q
Subjt:  RKNTLVQLVMRATGTFTPIQTRTIWGGDTISN------------------FHGEL-------------VQTNSTSLENMME-YMGRNDAAMRNLERQMRQ

Query:  LANDLKARPQGSFPGHTKVPKREGKVQCK
        LAN+L  RPQG    +T+ P+   K QCK
Subjt:  LANDLKARPQGSFPGHTKVPKREGKVQCK

A0A6J1DAG1 uncharacterized protein LOC1110185241.5e-4187Show/hide
Query:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI
        MDEIPP+NP DPP+V GNMA +QQNNEFNHI MADNRDVAMREYAAT FQNLD VIL+ I EAAN ELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI
Subjt:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI

A0A6J1DQF5 LOW QUALITY PROTEIN: uncharacterized protein LOC1110221604.5e-2261Show/hide
Query:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI
        MDEIPP+NP DPPVV GNMA+                           FQNLD  IL+ I +AANFELKPLMFQMLQTLGQFGGREH+DPHDHLKTF QI
Subjt:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI

A0A6J1DW02 uncharacterized protein LOC1110248971.1e-3330.16Show/hide
Query:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI
        M +IPPR+P DPP V GNM    +N+EFN+IQMADNRDVAMREYAAT FQN D  I++ I    NFELKP+MFQMLQT+G FGG+EHEDPHDHLK+F+QI
Subjt:  MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQI

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------KEMATMNEMLKEMALERKN---TLVQ
                                                                                  KEM TMN+ LKEMAL  KN   T +Q
Subjt:  --------------------------------------------------------------------------KEMATMNEMLKEMALERKN---TLVQ

Query:  LVMRATGTFTPI-----------QTRTIWGGDTISNFHGE--------------------------------LVQTNSTSLENMM-EYMGRND-------
         V     T  P+                WGG   S+   +                                 +Q N+++LENMM EYM R D       
Subjt:  LVMRATGTFTPI-----------QTRTIWGGDTISNFHGE--------------------------------LVQTNSTSLENMM-EYMGRND-------

Query:  AAMRNLERQMRQLANDLKARPQGSFPGHTKVPKREGKVQCK
        A+MRN   Q+  LAN+LK RPQGSFPGHT++P+REGK QCK
Subjt:  AAMRNLERQMRQLANDLKARPQGSFPGHTKVPKREGKVQCK

A0A6J1E251 uncharacterized protein LOC1110253023.7e-1650.49Show/hide
Query:  DEIPPRNPTDPPVVKGNMASRQQNNEF----NHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTF
        D  PP+NP     V G+MA  +  N      N I +ADNRDVAMR Y    F NL+  I + + +AA FELKP+MFQ+LQT+GQFGG  +EDP+ HLK+F
Subjt:  DEIPPRNPTDPPVVKGNMASRQQNNEF----NHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTF

Query:  LQI
        ++I
Subjt:  LQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAAATTCCACCTCGAAATCCTACAGATCCACCAGTTGTTAAAGGAAATATGGCAAGTCGACAACAAAACAACGAGTTCAACCATATCCAAATGGCAGATAATAG
GGACGTGGCCATGCGAGAGTATGCTGCTACAACATTCCAGAATTTGGATTTTGTCATCTTGAGTACCATTCTAGAAGCTGCCAACTTTGAACTCAAGCCGCTTATGTTTC
AAATGCTTCAGACATTAGGACAGTTTGGGGGGCGTGAACACGAAGATCCTCATGACCATCTCAAAACTTTTCTACAAATAAAAGAAATGGCGACAATGAACGAAATGCTC
AAGGAGATGGCTTTGGAAAGGAAGAACACACTGGTGCAACTTGTCATGAGAGCAACTGGAACTTTTACTCCTATTCAAACACGTACAATCTGGGGTGGAGACACAATCTC
AAATTTTCATGGGGAGCTAGTCCAGACTAATAGTACTAGCCTCGAGAATATGATGGAGTACATGGGTAGAAATGATGCAGCTATGAGAAACCTAGAGAGGCAAATGAGAC
AGCTCGCCAATGATTTGAAGGCGAGACCTCAAGGCTCTTTTCCTGGACATACTAAAGTTCCAAAAAGAGAAGGAAAAGTACAATGCAAGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAAATTCCACCTCGAAATCCTACAGATCCACCAGTTGTTAAAGGAAATATGGCAAGTCGACAACAAAACAACGAGTTCAACCATATCCAAATGGCAGATAATAG
GGACGTGGCCATGCGAGAGTATGCTGCTACAACATTCCAGAATTTGGATTTTGTCATCTTGAGTACCATTCTAGAAGCTGCCAACTTTGAACTCAAGCCGCTTATGTTTC
AAATGCTTCAGACATTAGGACAGTTTGGGGGGCGTGAACACGAAGATCCTCATGACCATCTCAAAACTTTTCTACAAATAAAAGAAATGGCGACAATGAACGAAATGCTC
AAGGAGATGGCTTTGGAAAGGAAGAACACACTGGTGCAACTTGTCATGAGAGCAACTGGAACTTTTACTCCTATTCAAACACGTACAATCTGGGGTGGAGACACAATCTC
AAATTTTCATGGGGAGCTAGTCCAGACTAATAGTACTAGCCTCGAGAATATGATGGAGTACATGGGTAGAAATGATGCAGCTATGAGAAACCTAGAGAGGCAAATGAGAC
AGCTCGCCAATGATTTGAAGGCGAGACCTCAAGGCTCTTTTCCTGGACATACTAAAGTTCCAAAAAGAGAAGGAAAAGTACAATGCAAGCAGTAA
Protein sequenceShow/hide protein sequence
MDEIPPRNPTDPPVVKGNMASRQQNNEFNHIQMADNRDVAMREYAATTFQNLDFVILSTILEAANFELKPLMFQMLQTLGQFGGREHEDPHDHLKTFLQIKEMATMNEML
KEMALERKNTLVQLVMRATGTFTPIQTRTIWGGDTISNFHGELVQTNSTSLENMMEYMGRNDAAMRNLERQMRQLANDLKARPQGSFPGHTKVPKREGKVQCKQ