; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g20130 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g20130
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4218 domain-containing protein
Genome locationchr6:15781558..15784044
RNA-Seq ExpressionMoc06g20130
SyntenyMoc06g20130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050152.1 uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa]7.4e-1246.51Show/hide
Query:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFKNKRLWDVPKVEDLEKDEVKLLEVEGGIGVD
        G+ETR NRDDRNDD I  DE+ GEFE+FR   +PLG S LR LS +EKQ VHW   N    +  ++ D  K  ++L+  +    +D
Subjt:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFKNKRLWDVPKVEDLEKDEVKLLEVEGGIGVD

KAA0051011.1 uncharacterized protein E6C27_scaffold2606G00380 [Cucumis melo var. makuwa]1.9e-1227.62Show/hide
Query:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVH------------------------------------------------
        G+ETR  RD+RNDDTI  DE+  EFEIF+ + RPLG S L+ LS  EK   H                                                
Subjt:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVH------------------------------------------------

Query:  ----------------WQ----FKNKRLWDVPKVEDLEKDEVKLLEVEGGIGVDETIIDNSYCKDDASPTIVDRQVIEEKLNIGIPSTRDDNFVNDQEED
                        W+     +N+ +WDVP+VED++ +++K+LE+     VDE I D++ C+ + +PT+V+R V+   +         D+F+ND ++ 
Subjt:  ----------------WQ----FKNKRLWDVPKVEDLEKDEVKLLEVEGGIGVDETIIDNSYCKDDASPTIVDRQVIEEKLNIGIPSTRDDNFVNDQEED

Query:  VEVSNANSSE
        +   +  S +
Subjt:  VEVSNANSSE

KAA0055173.1 hypothetical protein E6C27_scaffold2359G00020 [Cucumis melo var. makuwa]7.2e-1538.52Show/hide
Query:  METRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQF--------------------KNKRLWDVPKVEDLEKDEVKLLEVEG
        +ETR  RD+RNDDTI  DE+ GE E F  + RP G S LR LS +EK+  HW                      +NK +WDVP+V+D+E +++ +LE+  
Subjt:  METRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQF--------------------KNKRLWDVPKVEDLEKDEVKLLEVEG

Query:  GIGVDETIIDNSYCKDDASPTIVDRQVIEEKLNIG
        G  VDE I D+++ K D S   +   VI++ ++ G
Subjt:  GIGVDETIIDNSYCKDDASPTIVDRQVIEEKLNIG

TYJ96742.1 uncharacterized protein E5676_scaffold986G00340 [Cucumis melo var. makuwa]4.8e-1937.5Show/hide
Query:  RLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFK------NKRLWDVPKVEDLEKDEVKLLEVEGGIGVDETIIDNSYCKDD
        R NR+ RNDD++     CG+F++F+   RP+G S +R LS+DEK+  H  +K      NK++WD+P+  ++E D  +LLE    IGVDE+I D  +C+ D
Subjt:  RLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFK------NKRLWDVPKVEDLEKDEVKLLEVEGGIGVDETIIDNSYCKDD

Query:  ASPTIVDRQVIEEKLNIGIPSTRDDNFVNDQEEDVEVSNANSSETLELNDFE
           T+VD +  + +      S  DD+F+ND+ E +E S++++   L L + E
Subjt:  ASPTIVDRQVIEEKLNIGIPSTRDDNFVNDQEEDVEVSNANSSETLELNDFE

XP_022157102.1 uncharacterized protein LOC111023906 isoform X1 [Momordica charantia]1.5e-1266.67Show/hide
Query:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFKN
        G+ETRLNRD+RNDD +  +EICG+F+IFR  ARPLG   LRRLSDDEK+ VHW   N
Subjt:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFKN

TrEMBL top hitse value%identityAlignment
A0A5A7UBQ3 DUF4218 domain-containing protein9.4e-1327.62Show/hide
Query:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVH------------------------------------------------
        G+ETR  RD+RNDDTI  DE+  EFEIF+ + RPLG S L+ LS  EK   H                                                
Subjt:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVH------------------------------------------------

Query:  ----------------WQ----FKNKRLWDVPKVEDLEKDEVKLLEVEGGIGVDETIIDNSYCKDDASPTIVDRQVIEEKLNIGIPSTRDDNFVNDQEED
                        W+     +N+ +WDVP+VED++ +++K+LE+     VDE I D++ C+ + +PT+V+R V+   +         D+F+ND ++ 
Subjt:  ----------------WQ----FKNKRLWDVPKVEDLEKDEVKLLEVEGGIGVDETIIDNSYCKDDASPTIVDRQVIEEKLNIGIPSTRDDNFVNDQEED

Query:  VEVSNANSSE
        +   +  S +
Subjt:  VEVSNANSSE

A0A5A7UGU8 DUF4218 domain-containing protein3.5e-1538.52Show/hide
Query:  METRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQF--------------------KNKRLWDVPKVEDLEKDEVKLLEVEG
        +ETR  RD+RNDDTI  DE+ GE E F  + RP G S LR LS +EK+  HW                      +NK +WDVP+V+D+E +++ +LE+  
Subjt:  METRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQF--------------------KNKRLWDVPKVEDLEKDEVKLLEVEG

Query:  GIGVDETIIDNSYCKDDASPTIVDRQVIEEKLNIG
        G  VDE I D+++ K D S   +   VI++ ++ G
Subjt:  GIGVDETIIDNSYCKDDASPTIVDRQVIEEKLNIG

A0A5A7UI71 CACTA en-spm transposon protein3.6e-1237.01Show/hide
Query:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFKNKRLWDVPKVEDLEKDEVKLLEVEGGIGVDETIIDNSYCKDDAS
        G+ETR  R++RNDDTI  D++ GEF+IF+ + +PLG S LR         ++ + KN      P ++D++ +++ +LE+  G  VDE I D++ C  D  
Subjt:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFKNKRLWDVPKVEDLEKDEVKLLEVEGGIGVDETIIDNSYCKDDAS

Query:  PTIVDRQVIEEKLN--IGIPSTRDDNF
        PTIV++ V+    N  IG  S+   +F
Subjt:  PTIVDRQVIEEKLN--IGIPSTRDDNF

A0A5D3BA62 DUF4218 domain-containing protein2.3e-1937.5Show/hide
Query:  RLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFK------NKRLWDVPKVEDLEKDEVKLLEVEGGIGVDETIIDNSYCKDD
        R NR+ RNDD++     CG+F++F+   RP+G S +R LS+DEK+  H  +K      NK++WD+P+  ++E D  +LLE    IGVDE+I D  +C+ D
Subjt:  RLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFK------NKRLWDVPKVEDLEKDEVKLLEVEGGIGVDETIIDNSYCKDD

Query:  ASPTIVDRQVIEEKLNIGIPSTRDDNFVNDQEEDVEVSNANSSETLELNDFE
           T+VD +  + +      S  DD+F+ND+ E +E S++++   L L + E
Subjt:  ASPTIVDRQVIEEKLNIGIPSTRDDNFVNDQEEDVEVSNANSSETLELNDFE

A0A6J1DSI4 uncharacterized protein LOC111023906 isoform X17.2e-1366.67Show/hide
Query:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFKN
        G+ETRLNRD+RNDD +  +EICG+F+IFR  ARPLG   LRRLSDDEK+ VHW   N
Subjt:  GMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAGTTGGGGCAAACAACGCCTCCTAACCATTCTCCACAAGCCTTCTCCTAACATATTCCGGCACCGGTTCTTGGGTCTCATCAAAACCTCTCTCAAGGAGGATAT
CATGTGTTGTGAAGGCATGGAGACTAGACTTAATAGGGACGATCGTAACGATGATACAATATATGGGGATGAGATTTGTGGGGAGTTTGAAATTTTTAGATACAGAGCAC
GACCATTGGGGTATTCGCCCTTGCGTAGGTTGTCTGATGATGAGAAGCAAACAGTACATTGGCAGTTCAAAAATAAACGCTTATGGGACGTCCCAAAAGTAGAAGACCTT
GAGAAGGATGAAGTAAAGTTGTTAGAGGTAGAAGGTGGTATTGGAGTCGATGAAACTATCATAGATAATTCTTATTGTAAAGATGACGCGAGTCCCACTATTGTCGATCG
ACAAGTCATTGAAGAAAAGCTCAATATAGGTATACCATCAACCAGGGATGATAATTTTGTAAACGACCAAGAGGAGGATGTTGAAGTATCTAATGCTAATAGTTCAGAAA
CTTTAGAATTGAATGACTTTGAAAGTAGGGCTCTAGCTACACAAAGCTTGACAAATGATATATTCGAGGAGGTGGAACGGGAAGAAGAGTTGGGAGAGGGATCAAAAGAC
ATCCCTACCAATTACATTGCTCCTACTAAGGGAAGAGGCATAACTCGCTGTGTGGATTTGGACAGGAAAGTGGCAAAAAACGGGCTAATCAAAGTTGACGCGTTGGTCAC
CATGAAGGATACACTCGTAGCAAAAGGTTCATATCCACCTTCAAAGGAGGATTGTTGTCTGACGGTATTTTGTCATCAAGTTGGGTTCATCATAAATATGGAACTTGACC
TAGCACCAGGAGCACACAGAGGATACTCCTATACATATGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAGTTGGGGCAAACAACGCCTCCTAACCATTCTCCACAAGCCTTCTCCTAACATATTCCGGCACCGGTTCTTGGGTCTCATCAAAACCTCTCTCAAGGAGGATAT
CATGTGTTGTGAAGGCATGGAGACTAGACTTAATAGGGACGATCGTAACGATGATACAATATATGGGGATGAGATTTGTGGGGAGTTTGAAATTTTTAGATACAGAGCAC
GACCATTGGGGTATTCGCCCTTGCGTAGGTTGTCTGATGATGAGAAGCAAACAGTACATTGGCAGTTCAAAAATAAACGCTTATGGGACGTCCCAAAAGTAGAAGACCTT
GAGAAGGATGAAGTAAAGTTGTTAGAGGTAGAAGGTGGTATTGGAGTCGATGAAACTATCATAGATAATTCTTATTGTAAAGATGACGCGAGTCCCACTATTGTCGATCG
ACAAGTCATTGAAGAAAAGCTCAATATAGGTATACCATCAACCAGGGATGATAATTTTGTAAACGACCAAGAGGAGGATGTTGAAGTATCTAATGCTAATAGTTCAGAAA
CTTTAGAATTGAATGACTTTGAAAGTAGGGCTCTAGCTACACAAAGCTTGACAAATGATATATTCGAGGAGGTGGAACGGGAAGAAGAGTTGGGAGAGGGATCAAAAGAC
ATCCCTACCAATTACATTGCTCCTACTAAGGGAAGAGGCATAACTCGCTGTGTGGATTTGGACAGGAAAGTGGCAAAAAACGGGCTAATCAAAGTTGACGCGTTGGTCAC
CATGAAGGATACACTCGTAGCAAAAGGTTCATATCCACCTTCAAAGGAGGATTGTTGTCTGACGGTATTTTGTCATCAAGTTGGGTTCATCATAAATATGGAACTTGACC
TAGCACCAGGAGCACACAGAGGATACTCCTATACATATGATGATTAA
Protein sequenceShow/hide protein sequence
MCSWGKQRLLTILHKPSPNIFRHRFLGLIKTSLKEDIMCCEGMETRLNRDDRNDDTIYGDEICGEFEIFRYRARPLGYSPLRRLSDDEKQTVHWQFKNKRLWDVPKVEDL
EKDEVKLLEVEGGIGVDETIIDNSYCKDDASPTIVDRQVIEEKLNIGIPSTRDDNFVNDQEEDVEVSNANSSETLELNDFESRALATQSLTNDIFEEVEREEELGEGSKD
IPTNYIAPTKGRGITRCVDLDRKVAKNGLIKVDALVTMKDTLVAKGSYPPSKEDCCLTVFCHQVGFIINMELDLAPGAHRGYSYTYDD