; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g20180 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g20180
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein SPIRRIG
Genome locationchr6:15808416..15809398
RNA-Seq ExpressionMoc06g20180
SyntenyMoc06g20180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.6e-0576.92Show/hide
Query:  KQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK
        +QHKSPAPN GKS+ ++R+SEPISLDKGKP DRPES EK
Subjt:  KQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK

XP_022145129.1 uncharacterized protein LOC111014646 [Momordica charantia]3.9e-5469.89Show/hide
Query:  VTPERSPRRSDDNCSAKRRLNLDDP----------------------------------QFAVLEDKVEGMLQRMTQVLRQFERQESDDVPLVSNPRKGK
        +TPERSPRRSDDNCSAKRRLNLDDP                                  QFAVLEDKVEGMLQRMTQVLRQ+ERQESD+VPLV +PRKGK
Subjt:  VTPERSPRRSDDNCSAKRRLNLDDP----------------------------------QFAVLEDKVEGMLQRMTQVLRQFERQESDDVPLVSNPRKGK

Query:  GPAQSETEESTNSAGSKLRIGGNTKRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK
        GPAQSETEESTNSAGSKLRIGGNT+RRT+IFDSQK+KKQHK  APN G+S+ D+RNSEP+SLDKGKP D+PES EK
Subjt:  GPAQSETEESTNSAGSKLRIGGNTKRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK

XP_022155816.1 protein SPIRRIG [Momordica charantia]7.0e-1962.5Show/hide
Query:  RQESDDVPLVSNPRKGKGPAQSETEESTNSAGSKLRIGGNTKRRTRIFDS---QKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK
        R E+ +VPL   PRKGKGP +SE+EESTNS GS+LR+  N KRRT+ FDS   QK KKQ KSP P+ GKSN D +N+EPI LDK K TDRPE  E+
Subjt:  RQESDDVPLVSNPRKGKGPAQSETEESTNSAGSKLRIGGNTKRRTRIFDS---QKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.9e-4164.56Show/hide
Query:  VTPERSPRRSDDNCSAKRRLNLDDPQFAVLED--------KVEGMLQRMTQVL-----RQF---ERQESDDVPLVSNPRKGKGPAQSETEESTNSAGSKL
        +TPERSPRRSDD+CSAKRRLNL DPQ    ED        + EG+ +           +QF   E +ESD+VPLV +P+KGKGP +S+TEESTNS GSKL
Subjt:  VTPERSPRRSDDNCSAKRRLNLDDPQFAVLED--------KVEGMLQRMTQVL-----RQF---ERQESDDVPLVSNPRKGKGPAQSETEESTNSAGSKL

Query:  RIGGNTKRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK
        RIGGNT++RTRIFD +K KKQHKSPAPN GKS+ D+RNSEPISLDKGKP DRPES EK
Subjt:  RIGGNTKRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]3.1e-1180.77Show/hide
Query:  KRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK
        +RRTRIFDSQKIKKQHKS APN  K++ DNRNSEPISL+KGKP DRPES EK
Subjt:  KRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.2e-0576.92Show/hide
Query:  KQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK
        +QHKSPAPN GKS+ ++R+SEPISLDKGKP DRPES EK
Subjt:  KQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK

A0A6J1CUA7 uncharacterized protein LOC1110146461.9e-5469.89Show/hide
Query:  VTPERSPRRSDDNCSAKRRLNLDDP----------------------------------QFAVLEDKVEGMLQRMTQVLRQFERQESDDVPLVSNPRKGK
        +TPERSPRRSDDNCSAKRRLNLDDP                                  QFAVLEDKVEGMLQRMTQVLRQ+ERQESD+VPLV +PRKGK
Subjt:  VTPERSPRRSDDNCSAKRRLNLDDP----------------------------------QFAVLEDKVEGMLQRMTQVLRQFERQESDDVPLVSNPRKGK

Query:  GPAQSETEESTNSAGSKLRIGGNTKRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK
        GPAQSETEESTNSAGSKLRIGGNT+RRT+IFDSQK+KKQHK  APN G+S+ D+RNSEP+SLDKGKP D+PES EK
Subjt:  GPAQSETEESTNSAGSKLRIGGNTKRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK

A0A6J1DSV3 protein SPIRRIG3.4e-1962.5Show/hide
Query:  RQESDDVPLVSNPRKGKGPAQSETEESTNSAGSKLRIGGNTKRRTRIFDS---QKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK
        R E+ +VPL   PRKGKGP +SE+EESTNS GS+LR+  N KRRT+ FDS   QK KKQ KSP P+ GKSN D +N+EPI LDK K TDRPE  E+
Subjt:  RQESDDVPLVSNPRKGKGPAQSETEESTNSAGSKLRIGGNTKRRTRIFDS---QKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK

A0A6J1DWY0 uncharacterized protein LOC1110252931.4e-4164.56Show/hide
Query:  VTPERSPRRSDDNCSAKRRLNLDDPQFAVLED--------KVEGMLQRMTQVL-----RQF---ERQESDDVPLVSNPRKGKGPAQSETEESTNSAGSKL
        +TPERSPRRSDD+CSAKRRLNL DPQ    ED        + EG+ +           +QF   E +ESD+VPLV +P+KGKGP +S+TEESTNS GSKL
Subjt:  VTPERSPRRSDDNCSAKRRLNLDDPQFAVLED--------KVEGMLQRMTQVL-----RQF---ERQESDDVPLVSNPRKGKGPAQSETEESTNSAGSKL

Query:  RIGGNTKRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK
        RIGGNT++RTRIFD +K KKQHKSPAPN GKS+ D+RNSEPISLDKGKP DRPES EK
Subjt:  RIGGNTKRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK

A0A6J1E1E7 uncharacterized protein LOC1110255481.5e-1180.77Show/hide
Query:  KRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK
        +RRTRIFDSQKIKKQHKS APN  K++ DNRNSEPISL+KGKP DRPES EK
Subjt:  KRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTGTTATGCAATGGGAATCGATAGTCGAGCTACAGGTTACAATCGGAGGGAAGCCCATTGGGCCACGAGGGGCTCGGTCCCAAGCTGTGCTCGGCCTACGGCC
CAGCCAACGATCCCCATCTTTGATCGACGATTTCGCCCAGGCCCTGCAACGCATCCAGTTGAGCAACGTGACACCAGAAAGGAGTCCACGACGCTCTGATGATAATTGCT
CTGCCAAGAGGAGGCTCAACTTGGACGACCCTCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGCATGCTGCAACGCATGACCCAAGTCCTTCGACAATTCGAGCGACAA
GAGTCCGATGATGTACCTCTTGTCAGTAACCCGAGAAAAGGGAAGGGCCCAGCGCAAAGTGAGACCGAGGAATCAACAAACAGTGCAGGGAGCAAGTTGCGGATAGGTGG
AAATACCAAGCGACGAACCCGGATTTTCGACTCCCAAAAGATAAAAAAGCAACATAAATCTCCGGCACCAAACGAGGGCAAGAGCAACCAAGATAACCGAAACTCTGAGC
CGATAAGTCTTGACAAAGGCAAACCGACAGATCGGCCAGAGTCTTTAGAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATTTGTTATGCAATGGGAATCGATAGTCGAGCTACAGGTTACAATCGGAGGGAAGCCCATTGGGCCACGAGGGGCTCGGTCCCAAGCTGTGCTCGGCCTACGGCC
CAGCCAACGATCCCCATCTTTGATCGACGATTTCGCCCAGGCCCTGCAACGCATCCAGTTGAGCAACGTGACACCAGAAAGGAGTCCACGACGCTCTGATGATAATTGCT
CTGCCAAGAGGAGGCTCAACTTGGACGACCCTCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGCATGCTGCAACGCATGACCCAAGTCCTTCGACAATTCGAGCGACAA
GAGTCCGATGATGTACCTCTTGTCAGTAACCCGAGAAAAGGGAAGGGCCCAGCGCAAAGTGAGACCGAGGAATCAACAAACAGTGCAGGGAGCAAGTTGCGGATAGGTGG
AAATACCAAGCGACGAACCCGGATTTTCGACTCCCAAAAGATAAAAAAGCAACATAAATCTCCGGCACCAAACGAGGGCAAGAGCAACCAAGATAACCGAAACTCTGAGC
CGATAAGTCTTGACAAAGGCAAACCGACAGATCGGCCAGAGTCTTTAGAGAAGTGA
Protein sequenceShow/hide protein sequence
MLFVMQWESIVELQVTIGGKPIGPRGARSQAVLGLRPSQRSPSLIDDFAQALQRIQLSNVTPERSPRRSDDNCSAKRRLNLDDPQFAVLEDKVEGMLQRMTQVLRQFERQ
ESDDVPLVSNPRKGKGPAQSETEESTNSAGSKLRIGGNTKRRTRIFDSQKIKKQHKSPAPNEGKSNQDNRNSEPISLDKGKPTDRPESLEK