; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g20380 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g20380
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotransposon gag protein
Genome locationchr6:15931380..15932817
RNA-Seq ExpressionMoc06g20380
SyntenyMoc06g20380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151321.1 uncharacterized protein LOC111019284 [Momordica charantia]5.5e-2269.89Show/hide
Query:  NGLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNA
        NGLNEAT LVI  S NGALLSKPYAEAFD  + IS NKHQWSKSR AS+  SK L  ++VVADLNSKIS LVDI+MKN T  +AE SKA   A
Subjt:  NGLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNA

XP_022155867.1 uncharacterized protein LOC111022881 [Momordica charantia]6.3e-1869.41Show/hide
Query:  NGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNAVQSALCP
        NG+LLSK YAEAFDILERI  NKHQWSKSRAAS   SKGLV N+VVADLNSKIS+L DIVM++ + S+A AS      VQS  CP
Subjt:  NGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNAVQSALCP

XP_022156835.1 uncharacterized protein LOC111023669 [Momordica charantia]3.6e-1332.52Show/hide
Query:  GLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASE---AEASKAKVNAVQSAL
        GL++AT LVID S NGALL KPYAEAF+ILERIS N H WS  RA      KGL  +     LNSK+  L ++VM++ T      A   KA V+ +Q   
Subjt:  GLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASE---AEASKAKVNAVQSAL

Query:  CPYCE------ELPSDTEQPKW------DGKEQYKASTLRSGQALPPAYQQEGVSEGETVRLKTSKEIEQATQPVESASDEMSYSVDQLGDKKNSGTQTV
        C +CE        P + E   +      +GK  Y ++T   G    P +   G   G       +   +Q        S++   +V  + +   +  + +
Subjt:  CPYCE------ELPSDTEQPKW------DGKEQYKASTLRSGQALPPAYQQEGVSEGETVRLKTSKEIEQATQPVESASDEMSYSVDQLGDKKNSGTQTV

Query:  ESKDHE
          K+ E
Subjt:  ESKDHE

XP_022158768.1 uncharacterized protein LOC111025234 [Momordica charantia]1.1e-2265Show/hide
Query:  NEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNAVQSALCPYCE
        ++    VID S N ALL K YAEAFDILE ISRNKHQ SKSRA SST SKGL  ++VVA+LNSKIS+L DI MK+ + S+A ASKAKVN++Q+  CPYC+
Subjt:  NEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNAVQSALCPYCE

XP_022159060.1 uncharacterized protein LOC111025500 [Momordica charantia]6.7e-1234.26Show/hide
Query:  NGLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASE---AEASKAKVNAVQSA
        NGL++AT LVID S NGALL+KPYAEAF+ILERIS N   WS  RA     SKG   +     LN KI  L D+VM++ T      A A KA V+ +Q  
Subjt:  NGLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASE---AEASKAKVNAVQSA

Query:  LCPYC------EELPSDTEQPKWDGKEQ------YKASTLRSGQALPPAYQQEGVSEGETVRLKTSKEIEQATQPVESASDEMSYSVDQLG-DKKNSGTQ
         C +C         P + E   + G  Q      Y   T  +G  +    + E   E     LK  +  +   Q    +   +   V QL  D K+    
Subjt:  LCPYC------EELPSDTEQPKWDGKEQ------YKASTLRSGQALPPAYQQEGVSEGETVRLKTSKEIEQATQPVESASDEMSYSVDQLG-DKKNSGTQ

Query:  TVESKDHESRKDSKEE
         + S     ++D KE+
Subjt:  TVESKDHESRKDSKEE

TrEMBL top hitse value%identityAlignment
A0A6J1DEA2 uncharacterized protein LOC1110192842.7e-2269.89Show/hide
Query:  NGLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNA
        NGLNEAT LVI  S NGALLSKPYAEAFD  + IS NKHQWSKSR AS+  SK L  ++VVADLNSKIS LVDI+MKN T  +AE SKA   A
Subjt:  NGLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNA

A0A6J1DQJ0 uncharacterized protein LOC1110228813.0e-1869.41Show/hide
Query:  NGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNAVQSALCP
        NG+LLSK YAEAFDILERI  NKHQWSKSRAAS   SKGLV N+VVADLNSKIS+L DIVM++ + S+A AS      VQS  CP
Subjt:  NGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNAVQSALCP

A0A6J1DRG1 uncharacterized protein LOC1110236691.7e-1332.52Show/hide
Query:  GLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASE---AEASKAKVNAVQSAL
        GL++AT LVID S NGALL KPYAEAF+ILERIS N H WS  RA      KGL  +     LNSK+  L ++VM++ T      A   KA V+ +Q   
Subjt:  GLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASE---AEASKAKVNAVQSAL

Query:  CPYCE------ELPSDTEQPKW------DGKEQYKASTLRSGQALPPAYQQEGVSEGETVRLKTSKEIEQATQPVESASDEMSYSVDQLGDKKNSGTQTV
        C +CE        P + E   +      +GK  Y ++T   G    P +   G   G       +   +Q        S++   +V  + +   +  + +
Subjt:  CPYCE------ELPSDTEQPKW------DGKEQYKASTLRSGQALPPAYQQEGVSEGETVRLKTSKEIEQATQPVESASDEMSYSVDQLGDKKNSGTQTV

Query:  ESKDHE
          K+ E
Subjt:  ESKDHE

A0A6J1DX14 uncharacterized protein LOC1110252345.3e-2365Show/hide
Query:  NEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNAVQSALCPYCE
        ++    VID S N ALL K YAEAFDILE ISRNKHQ SKSRA SST SKGL  ++VVA+LNSKIS+L DI MK+ + S+A ASKAKVN++Q+  CPYC+
Subjt:  NEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASEAEASKAKVNAVQSALCPYCE

A0A6J1DXK5 uncharacterized protein LOC1110255003.2e-1234.26Show/hide
Query:  NGLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASE---AEASKAKVNAVQSA
        NGL++AT LVID S NGALL+KPYAEAF+ILERIS N   WS  RA     SKG   +     LN KI  L D+VM++ T      A A KA V+ +Q  
Subjt:  NGLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADLNSKISRLVDIVMKNATASE---AEASKAKVNAVQSA

Query:  LCPYC------EELPSDTEQPKWDGKEQ------YKASTLRSGQALPPAYQQEGVSEGETVRLKTSKEIEQATQPVESASDEMSYSVDQLG-DKKNSGTQ
         C +C         P + E   + G  Q      Y   T  +G  +    + E   E     LK  +  +   Q    +   +   V QL  D K+    
Subjt:  LCPYC------EELPSDTEQPKWDGKEQ------YKASTLRSGQALPPAYQQEGVSEGETVRLKTSKEIEQATQPVESASDEMSYSVDQLG-DKKNSGTQ

Query:  TVESKDHESRKDSKEE
         + S     ++D KE+
Subjt:  TVESKDHESRKDSKEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACACGTGGCAGAGCTTTGGAAGGCTTCAAATCACACCAAAACGTGCGTTTTACATTAAGGGAAATCTCGAGATTGGGGAAGGCGCCAAGCGCCTAGCTCGAAA
TTTTTCTGCACAAAAGGAAATCACACGTAATGGACTGAACGAGGCAACTCATCTGGTGATAGACACCTCGGTGAATGGGGCTTTACTGTCAAAGCCGTATGCGGAAGCTT
TTGACATCCTAGAGAGAATTTCACGCAACAAGCATCAATGGTCGAAATCCAGGGCTGCTTCTTCAACAAATTCGAAAGGTCTGGTGGCAAATAATGTGGTAGCAGACTTA
AACTCGAAGATCTCACGATTGGTTGATATAGTTATGAAAAATGCTACTGCAAGTGAGGCTGAAGCCTCCAAAGCTAAGGTGAATGCTGTGCAAAGTGCTCTCTGCCCATA
TTGTGAAGAGCTGCCGAGCGATACAGAACAGCCAAAATGGGATGGCAAAGAGCAATACAAGGCTTCAACGTTGCGAAGCGGCCAAGCACTACCACCAGCGTACCAACAAG
AAGGAGTTAGTGAAGGAGAGACAGTTAGACTAAAAACCTCCAAGGAAATAGAGCAAGCCACACAGCCCGTTGAGTCAGCAAGTGATGAGATGAGCTATAGTGTAGACCAG
CTGGGAGACAAAAAGAACAGTGGAACACAAACGGTAGAATCAAAGGATCATGAGTCTAGGAAGGATAGCAAGGAAGAGGTGCCTAAGACAGACAAAGCTAGATCATCCTC
GTCCAATTCAGCTGACAAGCTGCAGCATCCAGAACAACTCACTGCACCACAGACCACACCAGCCCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACACGTGGCAGAGCTTTGGAAGGCTTCAAATCACACCAAAACGTGCGTTTTACATTAAGGGAAATCTCGAGATTGGGGAAGGCGCCAAGCGCCTAGCTCGAAA
TTTTTCTGCACAAAAGGAAATCACACGTAATGGACTGAACGAGGCAACTCATCTGGTGATAGACACCTCGGTGAATGGGGCTTTACTGTCAAAGCCGTATGCGGAAGCTT
TTGACATCCTAGAGAGAATTTCACGCAACAAGCATCAATGGTCGAAATCCAGGGCTGCTTCTTCAACAAATTCGAAAGGTCTGGTGGCAAATAATGTGGTAGCAGACTTA
AACTCGAAGATCTCACGATTGGTTGATATAGTTATGAAAAATGCTACTGCAAGTGAGGCTGAAGCCTCCAAAGCTAAGGTGAATGCTGTGCAAAGTGCTCTCTGCCCATA
TTGTGAAGAGCTGCCGAGCGATACAGAACAGCCAAAATGGGATGGCAAAGAGCAATACAAGGCTTCAACGTTGCGAAGCGGCCAAGCACTACCACCAGCGTACCAACAAG
AAGGAGTTAGTGAAGGAGAGACAGTTAGACTAAAAACCTCCAAGGAAATAGAGCAAGCCACACAGCCCGTTGAGTCAGCAAGTGATGAGATGAGCTATAGTGTAGACCAG
CTGGGAGACAAAAAGAACAGTGGAACACAAACGGTAGAATCAAAGGATCATGAGTCTAGGAAGGATAGCAAGGAAGAGGTGCCTAAGACAGACAAAGCTAGATCATCCTC
GTCCAATTCAGCTGACAAGCTGCAGCATCCAGAACAACTCACTGCACCACAGACCACACCAGCCCCATAA
Protein sequenceShow/hide protein sequence
MEDTWQSFGRLQITPKRAFYIKGNLEIGEGAKRLARNFSAQKEITRNGLNEATHLVIDTSVNGALLSKPYAEAFDILERISRNKHQWSKSRAASSTNSKGLVANNVVADL
NSKISRLVDIVMKNATASEAEASKAKVNAVQSALCPYCEELPSDTEQPKWDGKEQYKASTLRSGQALPPAYQQEGVSEGETVRLKTSKEIEQATQPVESASDEMSYSVDQ
LGDKKNSGTQTVESKDHESRKDSKEEVPKTDKARSSSSNSADKLQHPEQLTAPQTTPAP