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Moc06g20480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g20480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:15985599..15996300
RNA-Seq ExpressionMoc06g20480
SyntenyMoc06g20480
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158520.1 uncharacterized protein LOC111024991 [Momordica charantia]1.9e-68100Show/hide
Query:  IREADVHEHTAESLVPRDPAHGKAPTISEEEDVPPQVPVRELLNLRARQTATIDPREGLRVHITTEAPDLRQMLEERNVSQQAGQQTPVTLNLGSTPMTR
        IREADVHEHTAESLVPRDPAHGKAPTISEEEDVPPQVPVRELLNLRARQTATIDPREGLRVHITTEAPDLRQMLEERNVSQQAGQQTPVTLNLGSTPMTR
Subjt:  IREADVHEHTAESLVPRDPAHGKAPTISEEEDVPPQVPVRELLNLRARQTATIDPREGLRVHITTEAPDLRQMLEERNVSQQAGQQTPVTLNLGSTPMTR

Query:  GVNSNTVQQPHAEAAATTSTYPTTVDVPEVQDSMKEVIIKL
        GVNSNTVQQPHAEAAATTSTYPTTVDVPEVQDSMKEVIIKL
Subjt:  GVNSNTVQQPHAEAAATTSTYPTTVDVPEVQDSMKEVIIKL
TrEMBL top hitse value%identityAlignment
A0A6J1DW30 Ribonuclease H9.0e-69100Show/hide
Query:  IREADVHEHTAESLVPRDPAHGKAPTISEEEDVPPQVPVRELLNLRARQTATIDPREGLRVHITTEAPDLRQMLEERNVSQQAGQQTPVTLNLGSTPMTR
        IREADVHEHTAESLVPRDPAHGKAPTISEEEDVPPQVPVRELLNLRARQTATIDPREGLRVHITTEAPDLRQMLEERNVSQQAGQQTPVTLNLGSTPMTR
Subjt:  IREADVHEHTAESLVPRDPAHGKAPTISEEEDVPPQVPVRELLNLRARQTATIDPREGLRVHITTEAPDLRQMLEERNVSQQAGQQTPVTLNLGSTPMTR

Query:  GVNSNTVQQPHAEAAATTSTYPTTVDVPEVQDSMKEVIIKL
        GVNSNTVQQPHAEAAATTSTYPTTVDVPEVQDSMKEVIIKL
Subjt:  GVNSNTVQQPHAEAAATTSTYPTTVDVPEVQDSMKEVIIKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTTTCTGCCAGGTCGAGATCGGACCAGGCAGAAAGGGGGCCAATGTTTGGGGAAGGGAATACCCTGGACACGTGGAGGACCCCTATTGGTGCTCCAAGATGGCT
CGTGAGTCATGCCCAGCTCGGAGAGCCGAGATGGCCGCCACCAACACCGACAAATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCCAGGTCCGCCCAAGTGTTCAGGTC
GGTCCGGAGGCCGAGTTCGAGCTACAATCAGGAACACATTGTTGTATGTTGATGTTTTTCCTACCTTGAATCTTCTCACTGTTCTTACTTTTTCTACCTTTGCTCTCTTT
CCTTTTGGAGCAACTTTTGTTGTATCTTGCTCCTCCCTACTTTTCCTCTTCCGATTCTTAGTCTCCGAGTTTGAAGCTACAGACTCATTTTTCAAGATCGAAACTGAGTT
TGAAGCTATAGACTCAGTTCTCAAGATCGAAACTGCGATCCGAGAGGCTGACGTACATGAACATACTGCTGAATCTCTCGTTCCAAGGGATCCAGCCCACGGAAAGGCTC
CAACGATATCAGAGGAGGAAGATGTTCCACCACAGGTGCCAGTTCGCGAGCTCCTCAATTTGAGAGCGAGACAAACTGCTACCATCGATCCAAGAGAAGGTCTTCGAGTG
CATATAACGACAGAAGCCCCAGATCTTCGTCAGATGCTAGAAGAACGCAACGTGTCACAACAAGCTGGGCAACAAACCCCAGTCACTCTAAACTTGGGATCTACCCCAAT
GACTCGAGGAGTCAATTCGAACACAGTTCAACAGCCACATGCCGAAGCAGCTGCAACTACATCGACATATCCAACCACGGTGGATGTGCCGGAAGTACAAGATTCCATGA
AGGAAGTCATCATCAAGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTTTTCTGCCAGGTCGAGATCGGACCAGGCAGAAAGGGGGCCAATGTTTGGGGAAGGGAATACCCTGGACACGTGGAGGACCCCTATTGGTGCTCCAAGATGGCT
CGTGAGTCATGCCCAGCTCGGAGAGCCGAGATGGCCGCCACCAACACCGACAAATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCCAGGTCCGCCCAAGTGTTCAGGTC
GGTCCGGAGGCCGAGTTCGAGCTACAATCAGGAACACATTGTTGTATGTTGATGTTTTTCCTACCTTGAATCTTCTCACTGTTCTTACTTTTTCTACCTTTGCTCTCTTT
CCTTTTGGAGCAACTTTTGTTGTATCTTGCTCCTCCCTACTTTTCCTCTTCCGATTCTTAGTCTCCGAGTTTGAAGCTACAGACTCATTTTTCAAGATCGAAACTGAGTT
TGAAGCTATAGACTCAGTTCTCAAGATCGAAACTGCGATCCGAGAGGCTGACGTACATGAACATACTGCTGAATCTCTCGTTCCAAGGGATCCAGCCCACGGAAAGGCTC
CAACGATATCAGAGGAGGAAGATGTTCCACCACAGGTGCCAGTTCGCGAGCTCCTCAATTTGAGAGCGAGACAAACTGCTACCATCGATCCAAGAGAAGGTCTTCGAGTG
CATATAACGACAGAAGCCCCAGATCTTCGTCAGATGCTAGAAGAACGCAACGTGTCACAACAAGCTGGGCAACAAACCCCAGTCACTCTAAACTTGGGATCTACCCCAAT
GACTCGAGGAGTCAATTCGAACACAGTTCAACAGCCACATGCCGAAGCAGCTGCAACTACATCGACATATCCAACCACGGTGGATGTGCCGGAAGTACAAGATTCCATGA
AGGAAGTCATCATCAAGCTTTAG
Protein sequenceShow/hide protein sequence
MNFSARSRSDQAERGPMFGEGNTLDTWRTPIGAPRWLVSHAQLGEPRWPPPTPTNAKYEGRGEPGPGPPKCSGRSGGRVRATIRNTLLYVDVFPTLNLLTVLTFSTFALF
PFGATFVVSCSSLLFLFRFLVSEFEATDSFFKIETEFEAIDSVLKIETAIREADVHEHTAESLVPRDPAHGKAPTISEEEDVPPQVPVRELLNLRARQTATIDPREGLRV
HITTEAPDLRQMLEERNVSQQAGQQTPVTLNLGSTPMTRGVNSNTVQQPHAEAAATTSTYPTTVDVPEVQDSMKEVIIKL