; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g20540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g20540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr6:16023051..16023707
RNA-Seq ExpressionMoc06g20540
SyntenyMoc06g20540
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154446.1 uncharacterized protein LOC111021718 [Momordica charantia]9.6e-0733.64Show/hide
Query:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE
        R F   L+G A  W++ L   SI++Y  L ++F++QF   + NR T THL +VRQK  E L+ YV R    +L+V +C++   +  +L G  +  L++  
Subjt:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE

Query:  GKKAVTMVKE
        G++  +   E
Subjt:  GKKAVTMVKE

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]4.7e-0633.65Show/hide
Query:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE
        R F     G A  W++ L   SI++Y  L ++F++QF   Y +R T THL ++RQK  E L+ YV R    +L+V +C++   +  +L G  +  L++  
Subjt:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE

Query:  GKKA
        G++A
Subjt:  GKKA

XP_022157448.1 uncharacterized protein LOC111024144 [Momordica charantia]3.6e-0632.73Show/hide
Query:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE
        R F   L G A  W++ L   SI++Y  L ++F++QF Y   +R T THL ++RQK  E L+ YV R    +L+V +C++   +  +  G  +  L++  
Subjt:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE

Query:  GKKAVTMVKE
        G++A +   E
Subjt:  GKKAVTMVKE

XP_022158303.1 uncharacterized protein LOC111024817 [Momordica charantia]8.1e-0630.58Show/hide
Query:  PTIMQLGRRGTTMFEQGRDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARLR---LRVPNCNESEK
        PT+     +  T   + R F     G A  W++ L   SI++Y  L ++F++QF   + +R T THL ++RQK  E L+ YV R +   L+V +C++   
Subjt:  PTIMQLGRRGTTMFEQGRDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARLR---LRVPNCNESEK

Query:  V--YLEGSIELPLSLGEGKKA
        +  +L G  +  L++  G++A
Subjt:  V--YLEGSIELPLSLGEGKKA

XP_022158414.1 uncharacterized protein LOC111024904 [Momordica charantia]4.7e-0632.73Show/hide
Query:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE
        R F   L G A  W++ L   SI++Y  L ++F++QF  ++ +R T THL ++RQK  E L+ YV R    +L+V +C++   +  +L    +  L++  
Subjt:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE

Query:  GKKAVTMVKE
        G++A T   E
Subjt:  GKKAVTMVKE

TrEMBL top hitse value%identityAlignment
A0A6J1DG02 uncharacterized protein LOC1110201053.9e-0633.65Show/hide
Query:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE
        R F     G A  W++ L   SI++Y  L ++F++QF   + +R T THL ++RQK  E L+ YV R    +L+V +C++   +  +L G  +  L++  
Subjt:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE

Query:  GKKA
        GK+A
Subjt:  GKKA

A0A6J1DM55 uncharacterized protein LOC1110222672.3e-0633.65Show/hide
Query:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE
        R F     G A  W++ L   SI++Y  L ++F++QF   Y +R T THL ++RQK  E L+ YV R    +L+V +C++   +  +L G  +  L++  
Subjt:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE

Query:  GKKA
        G++A
Subjt:  GKKA

A0A6J1DNR4 uncharacterized protein LOC1110217184.6e-0733.64Show/hide
Query:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE
        R F   L+G A  W++ L   SI++Y  L ++F++QF   + NR T THL +VRQK  E L+ YV R    +L+V +C++   +  +L G  +  L++  
Subjt:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE

Query:  GKKAVTMVKE
        G++  +   E
Subjt:  GKKAVTMVKE

A0A6J1DTD9 uncharacterized protein LOC1110241441.8e-0632.73Show/hide
Query:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE
        R F   L G A  W++ L   SI++Y  L ++F++QF Y   +R T THL ++RQK  E L+ YV R    +L+V +C++   +  +  G  +  L++  
Subjt:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE

Query:  GKKAVTMVKE
        G++A +   E
Subjt:  GKKAVTMVKE

A0A6J1DZB9 uncharacterized protein LOC1110249042.3e-0632.73Show/hide
Query:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE
        R F   L G A  W++ L   SI++Y  L ++F++QF  ++ +R T THL ++RQK  E L+ YV R    +L+V +C++   +  +L    +  L++  
Subjt:  RDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARL---RLRVPNCNESEKV--YLEGSIELPLSLGE

Query:  GKKAVTMVKE
        G++A T   E
Subjt:  GKKAVTMVKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGATCTACTGACCCCATGGATCATGCCACCTCCTACCATAATGCAATTAGGCAGGCGGGGTACAACAATGTTTGAACAGGGTCGGGACTTCTCCGGAACGCTCGT
TGGCCCAGCTTGGCAATGGTTCCAGAACCTCCATCAGTATTCCATCGCAAGTTACCAGGATCTCGCTCGCAAATTCGTCAACCAGTTTCATTACTTCTACATTAATCGAT
GGACAAAGACGCATCTCATGTCCGTAAGGCAGAAAGCCAACGAAGACTTAAAGTCGTACGTGGCTCGCTTACGATTGCGGGTGCCTAACTGCAATGAAAGTGAGAAAGTC
TACCTCGAGGGTAGTATTGAACTACCGCTAAGCCTGGGGGAGGGCAAGAAAGCCGTTACAATGGTTAAAGAGTTCGTTGTGGTGGACGATCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGATCTACTGACCCCATGGATCATGCCACCTCCTACCATAATGCAATTAGGCAGGCGGGGTACAACAATGTTTGAACAGGGTCGGGACTTCTCCGGAACGCTCGT
TGGCCCAGCTTGGCAATGGTTCCAGAACCTCCATCAGTATTCCATCGCAAGTTACCAGGATCTCGCTCGCAAATTCGTCAACCAGTTTCATTACTTCTACATTAATCGAT
GGACAAAGACGCATCTCATGTCCGTAAGGCAGAAAGCCAACGAAGACTTAAAGTCGTACGTGGCTCGCTTACGATTGCGGGTGCCTAACTGCAATGAAAGTGAGAAAGTC
TACCTCGAGGGTAGTATTGAACTACCGCTAAGCCTGGGGGAGGGCAAGAAAGCCGTTACAATGGTTAAAGAGTTCGTTGTGGTGGACGATCCCTGA
Protein sequenceShow/hide protein sequence
MTDLLTPWIMPPPTIMQLGRRGTTMFEQGRDFSGTLVGPAWQWFQNLHQYSIASYQDLARKFVNQFHYFYINRWTKTHLMSVRQKANEDLKSYVARLRLRVPNCNESEKV
YLEGSIELPLSLGEGKKAVTMVKEFVVVDDP