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Moc06g20610 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g20610
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111019515
Genome locationchr6:16063530..16064855
RNA-Seq ExpressionMoc06g20610
SyntenyMoc06g20610
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]4.1e-10488.26Show/hide
Query:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAVQAKKPTVPANEPKTRAAKAKAAEAKKKVVAP
        MATLPGVRDAH I SN VNPL C TGR KVGENSTQE   EED EDTQTIREMFQYKR E KSSKR AVQ  KPTVP NEPKTRAAKAKAAEAKKKVVAP
Subjt:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAVQAKKPTVPANEPKTRAAKAKAAEAKKKVVAP

Query:  GPVDTIELDLSEGEEVQTKWNAANLATRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR
        GPVD IELDLSEGE+V+T WNAANLATRTSLMK  KIMTELGFDLTLGDVPDDWR+TAR KEWRPLIQPIQCEALELVREFYAA HPQSHIAIVRGKEIR
Subjt:  GPVDTIELDLSEGEEVQTKWNAANLATRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR

Query:  FDATQINYTFNIENIRDAVGNKMLVTPTLE
        FDATQINYTFNI+NI+DAVGNKMLVTPTLE
Subjt:  FDATQINYTFNIENIRDAVGNKMLVTPTLE

XP_022152366.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111020110 [Momordica charantia]6.6e-2290.77Show/hide
Query:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSK
        MATLPGVRDAHTI SNTVNPLGCDTGRS+VGENSTQEPTSEEDLED QTIREMFQYKR E+ SSK
Subjt:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSK

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]8.9e-2730.14Show/hide
Query:  QEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAV-QAKKPTVPANEPKTRAAKA----KAAEAKKKVVAPGPVDTI-ELDLSEGEEVQTKWNAANLATRT
        +EP ++E    +  +    +       SS +GAV + +  T  A     + A+A    KA  A+ + VA  P++   E +    E+  ++     L  R 
Subjt:  QEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAV-QAKKPTVPANEPKTRAAKA----KAAEAKKKVVAPGPVDTI-ELDLSEGEEVQTKWNAANLATRT

Query:  SLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTL
            +R I+ E GFD     VP+  R+   +  W  L  PI   +  LV+EFY A++P       RG E+R                   GN++LV P+ 
Subjt:  SLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTL

Query:  EQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLAAAGWLYIVKNIILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRG
        EQ++EA   + +P  TW ++T GK+ LKP D++  A  W+Y+VKN ++PT +D  + ++RA++VY ++KG++ N+GELI   I  C+ +  G
Subjt:  EQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLAAAGWLYIVKNIILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRG

XP_022158852.1 uncharacterized protein LOC111025316 [Momordica charantia]2.4e-2492.75Show/hide
Query:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAV
        MATLPGVRDAHTI SN VNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKR E+KSSKR AV
Subjt:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAV

XP_022158884.1 uncharacterized protein LOC111025345 [Momordica charantia]7.1e-2477.38Show/hide
Query:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAVQAKKPTVPANEPKTR
        MATLPGVRDAH I SN VN LGCDTGR KVGENSTQEPT ++D EDTQT+REMFQYKR E+KSSK  AVQ KKPTVP N   TR
Subjt:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAVQAKKPTVPANEPKTR

TrEMBL top hitse value%identityAlignment
A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195152.0e-10488.26Show/hide
Query:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAVQAKKPTVPANEPKTRAAKAKAAEAKKKVVAP
        MATLPGVRDAH I SN VNPL C TGR KVGENSTQE   EED EDTQTIREMFQYKR E KSSKR AVQ  KPTVP NEPKTRAAKAKAAEAKKKVVAP
Subjt:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAVQAKKPTVPANEPKTRAAKAKAAEAKKKVVAP

Query:  GPVDTIELDLSEGEEVQTKWNAANLATRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR
        GPVD IELDLSEGE+V+T WNAANLATRTSLMK  KIMTELGFDLTLGDVPDDWR+TAR KEWRPLIQPIQCEALELVREFYAA HPQSHIAIVRGKEIR
Subjt:  GPVDTIELDLSEGEEVQTKWNAANLATRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR

Query:  FDATQINYTFNIENIRDAVGNKMLVTPTLE
        FDATQINYTFNI+NI+DAVGNKMLVTPTLE
Subjt:  FDATQINYTFNIENIRDAVGNKMLVTPTLE

A0A6J1DHH9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110201103.2e-2290.77Show/hide
Query:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSK
        MATLPGVRDAHTI SNTVNPLGCDTGRS+VGENSTQEPTSEEDLED QTIREMFQYKR E+ SSK
Subjt:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSK

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220074.3e-2730.14Show/hide
Query:  QEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAV-QAKKPTVPANEPKTRAAKA----KAAEAKKKVVAPGPVDTI-ELDLSEGEEVQTKWNAANLATRT
        +EP ++E    +  +    +       SS +GAV + +  T  A     + A+A    KA  A+ + VA  P++   E +    E+  ++     L  R 
Subjt:  QEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAV-QAKKPTVPANEPKTRAAKA----KAAEAKKKVVAPGPVDTI-ELDLSEGEEVQTKWNAANLATRT

Query:  SLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTL
            +R I+ E GFD     VP+  R+   +  W  L  PI   +  LV+EFY A++P       RG E+R                   GN++LV P+ 
Subjt:  SLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTL

Query:  EQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLAAAGWLYIVKNIILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRG
        EQ++EA   + +P  TW ++T GK+ LKP D++  A  W+Y+VKN ++PT +D  + ++RA++VY ++KG++ N+GELI   I  C+ +  G
Subjt:  EQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLAAAGWLYIVKNIILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRG

A0A6J1DY94 uncharacterized protein LOC1110253161.2e-2492.75Show/hide
Query:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAV
        MATLPGVRDAHTI SN VNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKR E+KSSKR AV
Subjt:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAV

A0A6J1E0Q9 uncharacterized protein LOC1110253453.4e-2477.38Show/hide
Query:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAVQAKKPTVPANEPKTR
        MATLPGVRDAH I SN VN LGCDTGR KVGENSTQEPT ++D EDTQT+REMFQYKR E+KSSK  AVQ KKPTVP N   TR
Subjt:  MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAVQAKKPTVPANEPKTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCTACCAGGGGTAAGGGATGCTCACACTATTTCTTCTAATACAGTTAACCCGCTTGGGTGTGATACAGGTAGATCCAAGGTTGGGGAGAATAGTACTCAAGA
ACCTACCAGCGAAGAAGATCTTGAGGACACGCAGACGATAAGGGAAATGTTCCAATACAAGAGGTGGGAGAGAAAGAGTTCAAAACGTGGTGCAGTTCAGGCTAAGAAGC
CAACAGTCCCCGCGAATGAACCTAAAACGAGAGCTGCGAAAGCTAAAGCAGCTGAAGCTAAGAAGAAGGTAGTGGCACCTGGGCCAGTTGATACAATTGAACTAGACTTG
TCTGAGGGAGAAGAGGTCCAGACGAAATGGAACGCGGCAAATTTAGCCACTCGAACTTCATTAATGAAATCCCGTAAGATTATGACAGAATTGGGATTTGATCTCACCCT
AGGAGATGTGCCTGATGATTGGAGGGAGACCGCTAGAGACAAAGAATGGAGACCACTCATTCAGCCCATACAATGTGAGGCTTTGGAGTTAGTCAGAGAGTTCTATGCTG
CTGTCCATCCCCAGTCACATATAGCCATAGTGCGCGGGAAGGAAATACGGTTTGATGCCACTCAGATCAACTACACCTTTAACATTGAGAATATCAGAGATGCTGTGGGC
AATAAGATGTTAGTGACTCCGACTCTGGAACAGCTTGATGAGGCTTTAGAATGTGTTGGGAAGCCCTCTGCCACTTGGGATTTGACTACTCATGGCAAGGTACGACTAAA
ACCCGAGGATGTTTCCCTAGCTGCTGCAGGATGGTTATACATAGTCAAAAACATAATTCTGCCAACGGAGCATGATGAGCATGTCACTCAGGATAGGGCATTGCTGGTTT
ATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACCAGTATCCATGAGTGTGCCCACCGGACACGTGGTAAGCTTTATCACCCACGTTTGGTCACT
TCTTTATGCTTACGACAAGGTGTACAGCTCCCTGAGGATCAAATTAAGAGAGATGCCCCAATTGTGGAAGAGAAGAATATTCGGCGTATTATCGCCCATGCGTTACAAAG
AAGGGAAGGTACTGGGATGTCTCCTACATCGGAGATCCGTCGTCTTCGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTAA
GGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCAGCGCTAGCTGCTATCCTTGGTCATCCATCTCCCAGTACTGACACTGATCCTAGTCCACAACCTCCGACT
TCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTCTACCAGGGGTAAGGGATGCTCACACTATTTCTTCTAATACAGTTAACCCGCTTGGGTGTGATACAGGTAGATCCAAGGTTGGGGAGAATAGTACTCAAGA
ACCTACCAGCGAAGAAGATCTTGAGGACACGCAGACGATAAGGGAAATGTTCCAATACAAGAGGTGGGAGAGAAAGAGTTCAAAACGTGGTGCAGTTCAGGCTAAGAAGC
CAACAGTCCCCGCGAATGAACCTAAAACGAGAGCTGCGAAAGCTAAAGCAGCTGAAGCTAAGAAGAAGGTAGTGGCACCTGGGCCAGTTGATACAATTGAACTAGACTTG
TCTGAGGGAGAAGAGGTCCAGACGAAATGGAACGCGGCAAATTTAGCCACTCGAACTTCATTAATGAAATCCCGTAAGATTATGACAGAATTGGGATTTGATCTCACCCT
AGGAGATGTGCCTGATGATTGGAGGGAGACCGCTAGAGACAAAGAATGGAGACCACTCATTCAGCCCATACAATGTGAGGCTTTGGAGTTAGTCAGAGAGTTCTATGCTG
CTGTCCATCCCCAGTCACATATAGCCATAGTGCGCGGGAAGGAAATACGGTTTGATGCCACTCAGATCAACTACACCTTTAACATTGAGAATATCAGAGATGCTGTGGGC
AATAAGATGTTAGTGACTCCGACTCTGGAACAGCTTGATGAGGCTTTAGAATGTGTTGGGAAGCCCTCTGCCACTTGGGATTTGACTACTCATGGCAAGGTACGACTAAA
ACCCGAGGATGTTTCCCTAGCTGCTGCAGGATGGTTATACATAGTCAAAAACATAATTCTGCCAACGGAGCATGATGAGCATGTCACTCAGGATAGGGCATTGCTGGTTT
ATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACCAGTATCCATGAGTGTGCCCACCGGACACGTGGTAAGCTTTATCACCCACGTTTGGTCACT
TCTTTATGCTTACGACAAGGTGTACAGCTCCCTGAGGATCAAATTAAGAGAGATGCCCCAATTGTGGAAGAGAAGAATATTCGGCGTATTATCGCCCATGCGTTACAAAG
AAGGGAAGGTACTGGGATGTCTCCTACATCGGAGATCCGTCGTCTTCGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTAA
GGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCAGCGCTAGCTGCTATCCTTGGTCATCCATCTCCCAGTACTGACACTGATCCTAGTCCACAACCTCCGACT
TCATGA
Protein sequenceShow/hide protein sequence
MATLPGVRDAHTISSNTVNPLGCDTGRSKVGENSTQEPTSEEDLEDTQTIREMFQYKRWERKSSKRGAVQAKKPTVPANEPKTRAAKAKAAEAKKKVVAPGPVDTIELDL
SEGEEVQTKWNAANLATRTSLMKSRKIMTELGFDLTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVG
NKMLVTPTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLAAAGWLYIVKNIILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKLYHPRLVT
SLCLRQGVQLPEDQIKRDAPIVEEKNIRRIIAHALQRREGTGMSPTSEIRRLREENQQLRDQVREVVQHIYNLRASLDFAVLPSWPPALAAILGHPSPSTDTDPSPQPPT
S