; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g20650 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g20650
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr6:16076520..16080375
RNA-Seq ExpressionMoc06g20650
SyntenyMoc06g20650
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR021109 - Aspartic peptidase domain superfamily
IPR036397 - Ribonuclease H superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]2.2e-28945.53Show/hide
Query:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW
        MLDIRDMSEKDKVF FVEGL PWA+ KLYEQ+VQD+ +AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR    DRR +Q   GN+W
Subjt:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW

Query:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------
        RG N  N +NR   SCFIC G H   ECPN+    AFQA+LT+D                              +++ +  ET+TP E  +  +      
Subjt:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------

Query:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT
        K  KSTMVDSGATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSGLVDFV+V+MDDFD+VLGMEFLLEH+VIPMPLAKCLV+T
Subjt:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT

Query:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------
        G  P++VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VP+EI RVLE Y D                                    
Subjt:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG
                                                               WNW PEC  AF+ LK+A+MEGP+LGIADVT+PFEVETDASD+ALG
Subjt:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG

Query:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL
        GVLLQ+GHPIAYESRKLN AERRY  SEKEMLAVVHCLRAWRQYLLG+ FVVKTDNS+ CHFF QP+L+SKQARWQE+LAEFDF+FEHK G +NQA DAL
Subjt:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL

Query:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL
        SRK EHAA+C+LAHL+ S++ GS+R+ +RE LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYAL
Subjt:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL

Query:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N
        LKKGY+WP++RDDVMQ                                                                                   +
Subjt:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N

Query:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG
        VVKLWGVP SIV+DRDGRF G+ WTELF  LG++LNISSSYHPQTDGQT+RFN+                        QFCFN Q S++TGR+PFEIV G
Subjt:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG

Query:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------
        RQPVLPH+VDHP+ GK+PQA NFTKEWRQ+ ++ARAYLEKASK MKKWADKKRRPLEF+ GDQV++KLRPEQ+                           
Subjt:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------

Query:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS
          RV LP WMK++PVIHVSNLK YH DT D  RN VTRP + L+ K DK+VE ILAER R+  RP R +  +LVKWK L  EE S
Subjt:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS

KAA0036830.1 reverse transcriptase [Cucumis melo var. makuwa]8.5e-28945.6Show/hide
Query:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW
        MLDIRDMSEKDKVF FVEGL PWA+ KLYEQ+VQD+ +AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR    DRR  Q   GN+W
Subjt:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW

Query:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------
        RG +  N +NR   SCFIC G H   ECPN+    AFQA+LT+D                              +++ +  ET+TP E  +  +      
Subjt:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------

Query:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT
        K  KSTMVDSGATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSGLVDFV+V+MDDFD+VLGMEFLLEH+VIPMPLAKCLV+T
Subjt:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT

Query:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------
        G  P++VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VP+EI RVLE Y D                                    
Subjt:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG
                                                               WNW PEC  AF+ LK+A+MEGP+LGIADVT+PFEVETDASD+ALG
Subjt:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG

Query:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL
        GVLLQ+GHPIAYESRKLN AERRY  SEKEMLAVVHCLRAWRQYLLG+ FVVKTDNS+ CHFF QP+L+SKQARWQE+LAEFDF+FEHK G +NQA DAL
Subjt:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL

Query:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL
        SRK EHAA+C+LAHL+ S++ GSIR+ +RE LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYAL
Subjt:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL

Query:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N
        LKKGY+WP++RDDVMQ                                                                                   +
Subjt:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N

Query:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG
        VVKLWGVP SIV+DRDGRF G+ WTELF  LG++LNISSSYHPQTDGQT+RFN+                        QFCFN Q S++TGR+PFEIV G
Subjt:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG

Query:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------
        RQPVLPH+VDHP+ GK+PQA NFTKEWRQ+ ++ARAYLEKASK MKKWADKKRRPLEF+ GDQV++KLRPEQ+                           
Subjt:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------

Query:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS
          RV LP WMK++PVIHVSNLK YH DT D  RN VTRP + L+ K DK+VE ILAER RR  RP R +  +LVKWK L  EE S
Subjt:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS

KAA0059106.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-28946.17Show/hide
Query:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW
        MLDIRDMS KDKVF FVEGL PWA+ KLYEQ+VQD+ +AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR    DRR  Q   GN+W
Subjt:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW

Query:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------
        RG +  N +NR   SCFIC G H   ECPN+    AFQA+LT+D                              +++ +  ET+TP E  +  +      
Subjt:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------

Query:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT
        K  KSTMVDSGATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSGLVDFV+V+MDDFD+VLGMEFLL+H+VIPMPL KCLV+T
Subjt:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT

Query:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------
        G  P++VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E +P+EI RVLE Y D                                    
Subjt:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG
                                                               WNW PEC AAF+ LK+A+MEGP+LGIADVT+PFEVETDASD+ALG
Subjt:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG

Query:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL
        GVLLQ+GHPIAYESRKLN AERRY  SEKEMLAVVHCLRAWRQYLLG+ FVVKTDNS+ CHFF QP+L+SKQARWQE+LAEFDF+FEHK G +NQA DAL
Subjt:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL

Query:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL
        SRK EHAA+C+LAHL+ S++ GS+R+ +RE LQ D AAQ ++ LA  GKTRQFWVE+DL  TKGNRLYVPR+GNLRK LL ECHDT+WAGH GWQRTYAL
Subjt:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL

Query:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N
        LKKGY+WP++RDDVMQ                                                                                   +
Subjt:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N

Query:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG
        VVKLWGVP SIV+DRDGRF G+ WTELF  LG++LNISSSYHPQTDGQ +RFN+                        QFCFN Q S++TGR+PFEIV G
Subjt:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG

Query:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQLRVQLPPWMKVHPVIHVSNLKSYHPDTV
        RQPVLPH+VDHP+  K+PQA NFTKEWRQ+ ++ARAYLEKASK MKKWADKKRRPLEF+ GDQV++KLRPEQ+RV LP WMK++PVIHVSNLK YH DT 
Subjt:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQLRVQLPPWMKVHPVIHVSNLKSYHPDTV

Query:  DPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEE
        D  RN VTRP + L+ K DK+VE ILAER RR  RP R +  +LVKWK L  EE
Subjt:  DPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEE

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-28845.53Show/hide
Query:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW
        MLDIRDMSEKDKVF FVEGL PWA+ KLYEQ+VQD+ +AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR    DRR  Q   GN+W
Subjt:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW

Query:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------
        RG +  N +NR   SCFIC G H   ECPN+    AFQA+LT+D                              +++ +  ET+TP E  +  +      
Subjt:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------

Query:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT
        K  KSTMVDSGATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSGLVDFV+V+MDDFD+VLGMEFLLEH+VIPMPLAKCLV+T
Subjt:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT

Query:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------
        G  P++VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VP+EI RVLE Y D                                    
Subjt:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG
                                                               WNW PEC  AF+ LK+A+MEGP+LGIADVT+PFEVETDASD+ALG
Subjt:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG

Query:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL
        GVLLQ+GHPIAYESRKLN AERRY  SEKEMLAVVHCLRAWRQYLLG+ FVVKTDNS+ CHFF QP+L+SKQARWQE+LAEFDF+FEHK G +NQA DAL
Subjt:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL

Query:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL
        SRK EHAA+C+LAHL+ S++ GS+R+ +RE LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYAL
Subjt:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL

Query:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N
        LKKGY+WP++RDDVMQ                                                                                   +
Subjt:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N

Query:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG
        VVKLWGVP SIV+DRDGRF G+ WTELF  LG++LNISSSYHPQTDGQT+RFN+                        QFCFN Q S++TGR+PFEIV G
Subjt:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG

Query:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------
        RQPVLPH+VDHP+ GK+PQA NFTKEWRQ+ ++ARAYLEKASK MKKWADKKRRPLEF+ GDQV++KLRPEQ+                           
Subjt:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------

Query:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS
          RV LP WMK++PVIHVSNLK YH DT D  RN VTRP + L+ K DK+VE ILAER RR  RP R +  +LVKWK L  EE S
Subjt:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]3.8e-28945.6Show/hide
Query:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW
        MLDIRDMSEKDKVF FVEGL PWA+ KLYEQ+VQD+ +AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR    DRR  Q   GN+W
Subjt:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW

Query:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------
        RGP+  N +NR   SCFIC G H   ECPN+    AFQA+L +D                              +++ +  ET+TP E  +  +      
Subjt:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------

Query:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT
        K  KSTMVDSGATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSGLVDFV+V+MDDFD+VLGMEFLLEH+VIPMPLAKCLV+T
Subjt:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT

Query:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------
        G  P++VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VP+EI RVLE Y D                                    
Subjt:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG
                                                               WNW PEC AAF+ LK+A+MEGP+LGIADVT+PFEVETDASD+ALG
Subjt:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG

Query:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL
        GVLLQ+GHPIAYESRKLN AERRY  SEKEMLAVVHCLRAWRQYLLG+ FVVKTDNS+ CHFF QP+L+SKQARWQE+LAEFDF+FEHK G +NQA DAL
Subjt:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL

Query:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL
        SRK EHAA+C+LAHL+ S++ GS+R+ +RE LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYAL
Subjt:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL

Query:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N
        LKKGY+WP++RDDVMQ                                                                                   +
Subjt:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N

Query:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG
        VVKLWGVP SIV+DRDGRF G+ WTELF  LG++LNISSSYHPQTDGQT+RFN+                        QFCFN Q S++TGR+PFEIV G
Subjt:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG

Query:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------
        RQPVLPH+VDHP+ GK+PQA NFTKEWRQ+ ++ARAYLEKASK MKKWADKKRRPLEF+ GDQV++KLRPEQ+                           
Subjt:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------

Query:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS
          RV LP WMK++PVIHVSNLK YH DT D  RN VTRP + L+ K DK+VE ILAER RR  RP R +  +LVKWK L  EE S
Subjt:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS

TrEMBL top hitse value%identityAlignment
A0A5A7SUK4 Reverse transcriptase1.1e-28945.53Show/hide
Query:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW
        MLDIRDMSEKDKVF FVEGL PWA+ KLYEQ+VQD+ +AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR    DRR +Q   GN+W
Subjt:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW

Query:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------
        RG N  N +NR   SCFIC G H   ECPN+    AFQA+LT+D                              +++ +  ET+TP E  +  +      
Subjt:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------

Query:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT
        K  KSTMVDSGATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSGLVDFV+V+MDDFD+VLGMEFLLEH+VIPMPLAKCLV+T
Subjt:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT

Query:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------
        G  P++VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VP+EI RVLE Y D                                    
Subjt:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG
                                                               WNW PEC  AF+ LK+A+MEGP+LGIADVT+PFEVETDASD+ALG
Subjt:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG

Query:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL
        GVLLQ+GHPIAYESRKLN AERRY  SEKEMLAVVHCLRAWRQYLLG+ FVVKTDNS+ CHFF QP+L+SKQARWQE+LAEFDF+FEHK G +NQA DAL
Subjt:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL

Query:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL
        SRK EHAA+C+LAHL+ S++ GS+R+ +RE LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYAL
Subjt:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL

Query:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N
        LKKGY+WP++RDDVMQ                                                                                   +
Subjt:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N

Query:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG
        VVKLWGVP SIV+DRDGRF G+ WTELF  LG++LNISSSYHPQTDGQT+RFN+                        QFCFN Q S++TGR+PFEIV G
Subjt:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG

Query:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------
        RQPVLPH+VDHP+ GK+PQA NFTKEWRQ+ ++ARAYLEKASK MKKWADKKRRPLEF+ GDQV++KLRPEQ+                           
Subjt:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------

Query:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS
          RV LP WMK++PVIHVSNLK YH DT D  RN VTRP + L+ K DK+VE ILAER R+  RP R +  +LVKWK L  EE S
Subjt:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS

A0A5A7T0E2 Reverse transcriptase4.1e-28945.6Show/hide
Query:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW
        MLDIRDMSEKDKVF FVEGL PWA+ KLYEQ+VQD+ +AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR    DRR  Q   GN+W
Subjt:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW

Query:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------
        RG +  N +NR   SCFIC G H   ECPN+    AFQA+LT+D                              +++ +  ET+TP E  +  +      
Subjt:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------

Query:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT
        K  KSTMVDSGATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSGLVDFV+V+MDDFD+VLGMEFLLEH+VIPMPLAKCLV+T
Subjt:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT

Query:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------
        G  P++VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VP+EI RVLE Y D                                    
Subjt:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG
                                                               WNW PEC  AF+ LK+A+MEGP+LGIADVT+PFEVETDASD+ALG
Subjt:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG

Query:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL
        GVLLQ+GHPIAYESRKLN AERRY  SEKEMLAVVHCLRAWRQYLLG+ FVVKTDNS+ CHFF QP+L+SKQARWQE+LAEFDF+FEHK G +NQA DAL
Subjt:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL

Query:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL
        SRK EHAA+C+LAHL+ S++ GSIR+ +RE LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYAL
Subjt:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL

Query:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N
        LKKGY+WP++RDDVMQ                                                                                   +
Subjt:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N

Query:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG
        VVKLWGVP SIV+DRDGRF G+ WTELF  LG++LNISSSYHPQTDGQT+RFN+                        QFCFN Q S++TGR+PFEIV G
Subjt:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG

Query:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------
        RQPVLPH+VDHP+ GK+PQA NFTKEWRQ+ ++ARAYLEKASK MKKWADKKRRPLEF+ GDQV++KLRPEQ+                           
Subjt:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------

Query:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS
          RV LP WMK++PVIHVSNLK YH DT D  RN VTRP + L+ K DK+VE ILAER RR  RP R +  +LVKWK L  EE S
Subjt:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS

A0A5A7UY33 Reverse transcriptase6.3e-29046.17Show/hide
Query:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW
        MLDIRDMS KDKVF FVEGL PWA+ KLYEQ+VQD+ +AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR    DRR  Q   GN+W
Subjt:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW

Query:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------
        RG +  N +NR   SCFIC G H   ECPN+    AFQA+LT+D                              +++ +  ET+TP E  +  +      
Subjt:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------

Query:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT
        K  KSTMVDSGATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSGLVDFV+V+MDDFD+VLGMEFLL+H+VIPMPL KCLV+T
Subjt:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT

Query:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------
        G  P++VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E +P+EI RVLE Y D                                    
Subjt:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG
                                                               WNW PEC AAF+ LK+A+MEGP+LGIADVT+PFEVETDASD+ALG
Subjt:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG

Query:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL
        GVLLQ+GHPIAYESRKLN AERRY  SEKEMLAVVHCLRAWRQYLLG+ FVVKTDNS+ CHFF QP+L+SKQARWQE+LAEFDF+FEHK G +NQA DAL
Subjt:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL

Query:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL
        SRK EHAA+C+LAHL+ S++ GS+R+ +RE LQ D AAQ ++ LA  GKTRQFWVE+DL  TKGNRLYVPR+GNLRK LL ECHDT+WAGH GWQRTYAL
Subjt:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL

Query:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N
        LKKGY+WP++RDDVMQ                                                                                   +
Subjt:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N

Query:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG
        VVKLWGVP SIV+DRDGRF G+ WTELF  LG++LNISSSYHPQTDGQ +RFN+                        QFCFN Q S++TGR+PFEIV G
Subjt:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG

Query:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQLRVQLPPWMKVHPVIHVSNLKSYHPDTV
        RQPVLPH+VDHP+  K+PQA NFTKEWRQ+ ++ARAYLEKASK MKKWADKKRRPLEF+ GDQV++KLRPEQ+RV LP WMK++PVIHVSNLK YH DT 
Subjt:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQLRVQLPPWMKVHPVIHVSNLKSYHPDTV

Query:  DPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEE
        D  RN VTRP + L+ K DK+VE ILAER RR  RP R +  +LVKWK L  EE
Subjt:  DPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEE

A0A5D3C4R1 Reverse transcriptase5.4e-28945.53Show/hide
Query:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW
        MLDIRDMSEKDKVF FVEGL PWA+ KLYEQ+VQD+ +AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR    DRR  Q   GN+W
Subjt:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW

Query:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------
        RG +  N +NR   SCFIC G H   ECPN+    AFQA+LT+D                              +++ +  ET+TP E  +  +      
Subjt:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------

Query:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT
        K  KSTMVDSGATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSGLVDFV+V+MDDFD+VLGMEFLLEH+VIPMPLAKCLV+T
Subjt:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT

Query:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------
        G  P++VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VP+EI RVLE Y D                                    
Subjt:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG
                                                               WNW PEC  AF+ LK+A+MEGP+LGIADVT+PFEVETDASD+ALG
Subjt:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG

Query:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL
        GVLLQ+GHPIAYESRKLN AERRY  SEKEMLAVVHCLRAWRQYLLG+ FVVKTDNS+ CHFF QP+L+SKQARWQE+LAEFDF+FEHK G +NQA DAL
Subjt:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL

Query:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL
        SRK EHAA+C+LAHL+ S++ GS+R+ +RE LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYAL
Subjt:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL

Query:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N
        LKKGY+WP++RDDVMQ                                                                                   +
Subjt:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N

Query:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG
        VVKLWGVP SIV+DRDGRF G+ WTELF  LG++LNISSSYHPQTDGQT+RFN+                        QFCFN Q S++TGR+PFEIV G
Subjt:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG

Query:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------
        RQPVLPH+VDHP+ GK+PQA NFTKEWRQ+ ++ARAYLEKASK MKKWADKKRRPLEF+ GDQV++KLRPEQ+                           
Subjt:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------

Query:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS
          RV LP WMK++PVIHVSNLK YH DT D  RN VTRP + L+ K DK+VE ILAER RR  RP R +  +LVKWK L  EE S
Subjt:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS

A0A5D3C9P8 Reverse transcriptase1.8e-28945.6Show/hide
Query:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW
        MLDIRDMSEKDKVF FVEGL PWA+ KLYEQ+VQD+ +AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR    DRR  Q   GN+W
Subjt:  MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTW

Query:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------
        RGP+  N +NR   SCFIC G H   ECPN+    AFQA+L +D                              +++ +  ET+TP E  +  +      
Subjt:  RGPNPPNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTND-----------------------------RAIEPEGPETDTPPEAPMTTL------

Query:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT
        K  KSTMVDSGATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSGLVDFV+V+MDDFD+VLGMEFLLEH+VIPMPLAKCLV+T
Subjt:  KAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVT

Query:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------
        G  P++VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VP+EI RVLE Y D                                    
Subjt:  GSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEPVPREIQRVLEAYTD------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG
                                                               WNW PEC AAF+ LK+A+MEGP+LGIADVT+PFEVETDASD+ALG
Subjt:  ------------------------------------------------------KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALG

Query:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL
        GVLLQ+GHPIAYESRKLN AERRY  SEKEMLAVVHCLRAWRQYLLG+ FVVKTDNS+ CHFF QP+L+SKQARWQE+LAEFDF+FEHK G +NQA DAL
Subjt:  GVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDAL

Query:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL
        SRK EHAA+C+LAHL+ S++ GS+R+ +RE LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYAL
Subjt:  SRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYAL

Query:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N
        LKKGY+WP++RDDVMQ                                                                                   +
Subjt:  LKKGYYWPSLRDDVMQ-----------------------------------------------------------------------------------N

Query:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG
        VVKLWGVP SIV+DRDGRF G+ WTELF  LG++LNISSSYHPQTDGQT+RFN+                        QFCFN Q S++TGR+PFEIV G
Subjt:  VVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRFNT------------------------QFCFNCQKSTTTGRTPFEIVCG

Query:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------
        RQPVLPH+VDHP+ GK+PQA NFTKEWRQ+ ++ARAYLEKASK MKKWADKKRRPLEF+ GDQV++KLRPEQ+                           
Subjt:  RQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVKLRPEQL---------------------------

Query:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS
          RV LP WMK++PVIHVSNLK YH DT D  RN VTRP + L+ K DK+VE ILAER RR  RP R +  +LVKWK L  EE S
Subjt:  --RVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.63.2e-2844.06Show/hide
Query:  PECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALGGVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSV
        PE  +AF+ LK  + E P+L + D T+ F + TDASD ALG VL QDGHP++Y SR LN+ E  Y+  EKE+LA+V   + +R YLLG  F + +D+  +
Subjt:  PECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALGGVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSV

Query:  CHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDALSR
           +     +SK  RW+  L+EFDF  ++  G+ N   DALSR
Subjt:  CHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDALSR

P0CT41 Transposon Tf2-12 polyprotein6.0e-2726.5Show/hide
Query:  KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALGGVLLQDG-----HPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGA-
        +W WTP    A E++K+ ++  PVL   D ++   +ETDASD A+G VL Q       +P+ Y S K++ A+  Y+ S+KEMLA++  L+ WR YL    
Subjt:  KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALGGVLLQDG-----HPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGA-

Query:  -KFVVKTDNSS-VCHFFNQPQLSSKQ-ARWQEYLAEFDFQFEHKPGRANQAVDALSR----------KSEHAALCMLAHLKASKLTGSIREAIRENLQND
          F + TD+ + +    N+ +  +K+ ARWQ +L +F+F+  ++PG AN   DALSR           SE  ++  +  +    +T   +  +     ND
Subjt:  -KFVVKTDNSS-VCHFFNQPQLSSKQ-ARWQEYLAEFDFQFEHKPGRANQAVDALSR----------KSEHAALCMLAHLKASKLTGSIREAIRENLQND

Query:  PAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPSLRDDVMQNV
             ++   ++       +++ LL    +++ +P    L + ++ + H+     H G +    ++ + + W  +R  + + V
Subjt:  PAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPSLRDDVMQNV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.7e-2923.54Show/hide
Query:  GVKMISALQLKKGLARDEPTFMAIPVAEG--------RNSEEPVPREIQRVLEAYTDKWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDF
        G++ I+ LQ K    RD PT   +  A+         R       +  Q +     DK  WT +   A E LK A+   PVL   +    + + TDAS  
Subjt:  GVKMISALQLKKGLARDEPTFMAIPVAEG--------RNSEEPVPREIQRVLEAYTDKWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDF

Query:  ALGGVLLQDGHP------IAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPG
         +G VL +  +       + Y S+ L  A++ Y A E E+L ++  L  +R  L G  F ++TD+ S+    N+ + + +  RW + LA +DF  E+  G
Subjt:  ALGGVLLQDGHP------IAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPG

Query:  RANQAVDALSR----------------------KSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYV
          N   DA+SR                      KS+     +L H+K  +LT        E++    + Q  ++L +E   + + +E+++++ + +RL V
Subjt:  RANQAVDALSR----------------------KSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYV

Query:  PRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPSLRDDVMQ-----------------------------------------------------
        P       + L   H T++ GH G   T A +   YYWP L+  ++Q                                                     
Subjt:  PRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPSLRDDVMQ-----------------------------------------------------

Query:  -------------------------------NVVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRF----------------
                                        +    G P +I +DRD R T   + EL + LG    +SS+ HPQTDGQ++R                 
Subjt:  -------------------------------NVVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRF----------------

Query:  --------NTQFCFNCQKSTTTGRTPFEIVCGRQPVLPHV-VDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIV
                  +F +N   + T G++PFEI  G  P  P +  D     +S  A    K  +  T   +  LE A   M+   +++R+PL    GD V+V
Subjt:  --------NTQFCFNCQKSTTTGRTPFEIVCGRQPVLPHV-VDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIV

Q99315 Transposon Ty3-G Gag-Pol polyprotein4.9e-2923.07Show/hide
Query:  GVKMISALQLKKGLARDEPTFMAIPVAEG--------RNSEEPVPREIQRVLEAYTDKWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDF
        G++ I+ LQ K    RD PT   +  A+         R       +  Q +     DK  WT +   A + LK A+   PVL   +    + + TDAS  
Subjt:  GVKMISALQLKKGLARDEPTFMAIPVAEG--------RNSEEPVPREIQRVLEAYTDKWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDF

Query:  ALGGVLLQDGHP------IAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPG
         +G VL +  +       + Y S+ L  A++ Y A E E+L ++  L  +R  L G  F ++TD+ S+    N+ + + +  RW + LA +DF  E+  G
Subjt:  ALGGVLLQDGHP------IAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPG

Query:  RANQAVDALSR----------------------KSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYV
          N   DA+SR                      KS+     +L H+K  +LT        E++    + Q  ++L +E   + + +E+++++ + +RL V
Subjt:  RANQAVDALSR----------------------KSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYV

Query:  PRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPSLRDDVMQ-----------------------------------------------------
        P       + L   H T++ GH G   T A +   YYWP L+  ++Q                                                     
Subjt:  PRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPSLRDDVMQ-----------------------------------------------------

Query:  -------------------------------NVVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRF----------------
                                        +    G P +I +DRD R T   + EL + LG    +SS+ HPQTDGQ++R                 
Subjt:  -------------------------------NVVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNISSSYHPQTDGQTKRF----------------

Query:  --------NTQFCFNCQKSTTTGRTPFEIVCGRQPVLPHV-VDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIV-
                  +F +N   + T G++PFEI  G  P  P +  D     +S  A    K  +  T   +  LE A   M+   +++R+PL    GD V+V 
Subjt:  --------NTQFCFNCQKSTTTGRTPFEIVCGRQPVLPHV-VDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIV-

Query:  -------------------------KLRPEQLRVQLPPWMKVHPVIHVSNLKS--YHPD
                                 K+      + L    K H VI+V  LK   Y PD
Subjt:  -------------------------KLRPEQLRVQLPPWMKVHPVIHVSNLKS--YHPD

Q9UR07 Transposon Tf2-11 polyprotein6.0e-2726.5Show/hide
Query:  KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALGGVLLQDG-----HPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGA-
        +W WTP    A E++K+ ++  PVL   D ++   +ETDASD A+G VL Q       +P+ Y S K++ A+  Y+ S+KEMLA++  L+ WR YL    
Subjt:  KWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALGGVLLQDG-----HPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYLLGA-

Query:  -KFVVKTDNSS-VCHFFNQPQLSSKQ-ARWQEYLAEFDFQFEHKPGRANQAVDALSR----------KSEHAALCMLAHLKASKLTGSIREAIRENLQND
          F + TD+ + +    N+ +  +K+ ARWQ +L +F+F+  ++PG AN   DALSR           SE  ++  +  +    +T   +  +     ND
Subjt:  -KFVVKTDNSS-VCHFFNQPQLSSKQ-ARWQEYLAEFDFQFEHKPGRANQAVDALSR----------KSEHAALCMLAHLKASKLTGSIREAIRENLQND

Query:  PAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPSLRDDVMQNV
             ++   ++       +++ LL    +++ +P    L + ++ + H+     H G +    ++ + + W  +R  + + V
Subjt:  PAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPSLRDDVMQNV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATATCCGCGATATGTCCGAGAAAGACAAGGTCTTCACCTTCGTGGAGGGCTTGAACCCATGGGCCCGAGCTAAACTATATGAACAGAAGGTACAAGAT
ATCCCTACTGCTTACGCAACAGCCGAACGGCTGTTCGATCTTAGCAACGACACGTCACAAGAGCAGAGGAAGACCCAAGCTTCTTCCAGTAGTGGAAACAGACCC
GCAAGATCGTGGTCCCCTAAAAATGGGGGAGCTGACAGAAATGGAGGAAGAGACCGCAGACCCTTCCAGCAGAGAGGGGGAAATACGTGGAGAGGGCCGAACCCA
CCAAACAATAACAATCGAACAGGACCATCCTGCTTCATTTGTAATGGACTGCACAGGATATACGAGTGTCCGAATCGAGCTACTCTCCGGGCCTTCCAAGCCACA
CTGACGAACGACCGAGCGATCGAACCGGAAGGCCCCGAAACAGATACTCCTCCCGAAGCGCCGATGACAACCCTCAAAGCCGCAAAAAGCACTATGGTAGATTCT
GGTGCCACCCACAATTTCATGACAGAAACCGAGGCACGTCGGCTGAACTTGCGATGGGATAAAGACCCAGGAAAGATGAAAGCGGTCAACTCGGCTGCTCTCCCC
ATCATGGGAGTTGCAAAAAGAGTCTCAGTAAAGCTAGGGACATGGAGTGGATTGGTCGACTTTGTGATAGTGCGGATGGACGACTTCGACATAGTATTGGGGATG
GAATTTCTGCTGGAACACAAAGTCATCCCCATGCCCCTTGCTAAGTGCCTGGTTGTAACGGGTTCCGATCCCACAATTGTTCAGACAAGCATCAAACAACCAAGC
GGAGTGAAGATGATATCAGCACTACAGCTAAAGAAAGGTCTCGCCCGTGACGAGCCGACCTTCATGGCCATTCCTGTTGCGGAAGGCAGAAATTCTGAAGAGCCA
GTTCCCAGAGAAATCCAGCGAGTCTTGGAGGCGTATACCGATAAGTGGAACTGGACCCCAGAATGTCACGCCGCATTTGAGAGTTTGAAAAAGGCAATGATGGAG
GGGCCGGTGTTGGGAATTGCAGACGTCACACGACCGTTCGAAGTTGAAACCGATGCGTCAGACTTCGCACTAGGAGGAGTGCTTCTCCAAGACGGTCACCCCATT
GCATACGAGAGTCGGAAGTTGAATGATGCTGAAAGGAGGTATGCCGCCTCCGAGAAAGAGATGTTAGCAGTAGTCCACTGCTTGAGGGCATGGAGGCAATATCTC
CTAGGGGCCAAGTTCGTTGTCAAGACCGACAACAGCTCAGTTTGTCACTTCTTCAACCAACCGCAGTTGTCGTCCAAGCAAGCTAGGTGGCAAGAGTACCTCGCC
GAGTTCGATTTTCAGTTTGAACATAAGCCCGGTCGAGCAAATCAGGCGGTAGATGCCCTTAGCAGAAAGAGCGAACATGCGGCCCTGTGCATGTTAGCTCACCTA
AAAGCGAGCAAGCTCACTGGATCCATTCGTGAAGCTATCAGAGAGAACTTACAGAATGACCCAGCTGCCCAAGCGATAATTCAGTTAGCCAACGAAGGGAAGACT
AGACAGTTTTGGGTGGAGAATGACCTCCTCTTCACCAAAGGTAACCGTTTGTATGTTCCCCGTTCTGGGAACTTAAGAAAGCTCCTACTTGGAGAATGTCACGAC
ACGATGTGGGCAGGCCATGCTGGATGGCAGAGAACTTACGCCCTGTTAAAGAAAGGCTACTACTGGCCGAGTTTGAGAGACGACGTGATGCAGAATGTGGTGAAA
TTATGGGGTGTTCCTGAGAGCATCGTGAACGACAGAGACGGACGCTTCACAGGGACATTATGGACAGAACTTTTCCGCCTACTGGGATCCAATTTGAACATCTCT
TCGAGTTATCACCCACAGACCGACGGACAGACGAAACGCTTCAACACCCAATTCTGTTTCAATTGCCAAAAGAGCACCACCACGGGAAGAACCCCTTTCGAAATC
GTGTGCGGGCGACAACCGGTGTTACCTCATGTTGTCGACCATCCTTATGTGGGCAAGAGCCCTCAAGCCTACAATTTCACGAAGGAATGGCGTCAATCCACCGAA
GTCGCCCGAGCATACCTAGAGAAGGCGTCTAAACACATGAAAAAGTGGGCAGACAAAAAGCGAAGACCATTAGAATTCCAGCCAGGAGATCAAGTCATTGTGAAG
CTGAGACCTGAACAGCTTCGGGTTCAACTACCCCCGTGGATGAAAGTCCATCCAGTAATCCACGTGAGCAACTTGAAGTCTTACCATCCCGACACTGTCGACCCT
ACACGAAATGAGGTAACCCGTCCAGCAGTCACGTTGACAAACAAGATTGACAAAGAAGTTGAGTCAATCCTCGCCGAAAGAACACGCCGAGTAGGAAGACCACGA
AGGGACGTCCAGGCATTCCTAGTCAAGTGGAAAGGGCTCCTAGATGAAGAGATAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGATATCCGCGATATGTCCGAGAAAGACAAGGTCTTCACCTTCGTGGAGGGCTTGAACCCATGGGCCCGAGCTAAACTATATGAACAGAAGGTACAAGAT
ATCCCTACTGCTTACGCAACAGCCGAACGGCTGTTCGATCTTAGCAACGACACGTCACAAGAGCAGAGGAAGACCCAAGCTTCTTCCAGTAGTGGAAACAGACCC
GCAAGATCGTGGTCCCCTAAAAATGGGGGAGCTGACAGAAATGGAGGAAGAGACCGCAGACCCTTCCAGCAGAGAGGGGGAAATACGTGGAGAGGGCCGAACCCA
CCAAACAATAACAATCGAACAGGACCATCCTGCTTCATTTGTAATGGACTGCACAGGATATACGAGTGTCCGAATCGAGCTACTCTCCGGGCCTTCCAAGCCACA
CTGACGAACGACCGAGCGATCGAACCGGAAGGCCCCGAAACAGATACTCCTCCCGAAGCGCCGATGACAACCCTCAAAGCCGCAAAAAGCACTATGGTAGATTCT
GGTGCCACCCACAATTTCATGACAGAAACCGAGGCACGTCGGCTGAACTTGCGATGGGATAAAGACCCAGGAAAGATGAAAGCGGTCAACTCGGCTGCTCTCCCC
ATCATGGGAGTTGCAAAAAGAGTCTCAGTAAAGCTAGGGACATGGAGTGGATTGGTCGACTTTGTGATAGTGCGGATGGACGACTTCGACATAGTATTGGGGATG
GAATTTCTGCTGGAACACAAAGTCATCCCCATGCCCCTTGCTAAGTGCCTGGTTGTAACGGGTTCCGATCCCACAATTGTTCAGACAAGCATCAAACAACCAAGC
GGAGTGAAGATGATATCAGCACTACAGCTAAAGAAAGGTCTCGCCCGTGACGAGCCGACCTTCATGGCCATTCCTGTTGCGGAAGGCAGAAATTCTGAAGAGCCA
GTTCCCAGAGAAATCCAGCGAGTCTTGGAGGCGTATACCGATAAGTGGAACTGGACCCCAGAATGTCACGCCGCATTTGAGAGTTTGAAAAAGGCAATGATGGAG
GGGCCGGTGTTGGGAATTGCAGACGTCACACGACCGTTCGAAGTTGAAACCGATGCGTCAGACTTCGCACTAGGAGGAGTGCTTCTCCAAGACGGTCACCCCATT
GCATACGAGAGTCGGAAGTTGAATGATGCTGAAAGGAGGTATGCCGCCTCCGAGAAAGAGATGTTAGCAGTAGTCCACTGCTTGAGGGCATGGAGGCAATATCTC
CTAGGGGCCAAGTTCGTTGTCAAGACCGACAACAGCTCAGTTTGTCACTTCTTCAACCAACCGCAGTTGTCGTCCAAGCAAGCTAGGTGGCAAGAGTACCTCGCC
GAGTTCGATTTTCAGTTTGAACATAAGCCCGGTCGAGCAAATCAGGCGGTAGATGCCCTTAGCAGAAAGAGCGAACATGCGGCCCTGTGCATGTTAGCTCACCTA
AAAGCGAGCAAGCTCACTGGATCCATTCGTGAAGCTATCAGAGAGAACTTACAGAATGACCCAGCTGCCCAAGCGATAATTCAGTTAGCCAACGAAGGGAAGACT
AGACAGTTTTGGGTGGAGAATGACCTCCTCTTCACCAAAGGTAACCGTTTGTATGTTCCCCGTTCTGGGAACTTAAGAAAGCTCCTACTTGGAGAATGTCACGAC
ACGATGTGGGCAGGCCATGCTGGATGGCAGAGAACTTACGCCCTGTTAAAGAAAGGCTACTACTGGCCGAGTTTGAGAGACGACGTGATGCAGAATGTGGTGAAA
TTATGGGGTGTTCCTGAGAGCATCGTGAACGACAGAGACGGACGCTTCACAGGGACATTATGGACAGAACTTTTCCGCCTACTGGGATCCAATTTGAACATCTCT
TCGAGTTATCACCCACAGACCGACGGACAGACGAAACGCTTCAACACCCAATTCTGTTTCAATTGCCAAAAGAGCACCACCACGGGAAGAACCCCTTTCGAAATC
GTGTGCGGGCGACAACCGGTGTTACCTCATGTTGTCGACCATCCTTATGTGGGCAAGAGCCCTCAAGCCTACAATTTCACGAAGGAATGGCGTCAATCCACCGAA
GTCGCCCGAGCATACCTAGAGAAGGCGTCTAAACACATGAAAAAGTGGGCAGACAAAAAGCGAAGACCATTAGAATTCCAGCCAGGAGATCAAGTCATTGTGAAG
CTGAGACCTGAACAGCTTCGGGTTCAACTACCCCCGTGGATGAAAGTCCATCCAGTAATCCACGTGAGCAACTTGAAGTCTTACCATCCCGACACTGTCGACCCT
ACACGAAATGAGGTAACCCGTCCAGCAGTCACGTTGACAAACAAGATTGACAAAGAAGTTGAGTCAATCCTCGCCGAAAGAACACGCCGAGTAGGAAGACCACGA
AGGGACGTCCAGGCATTCCTAGTCAAGTGGAAAGGGCTCCTAGATGAAGAGATAAGTTAG
Protein sequenceShow/hide protein sequence
MLDIRDMSEKDKVFTFVEGLNPWARAKLYEQKVQDIPTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSWSPKNGGADRNGGRDRRPFQQRGGNTWRGPNP
PNNNNRTGPSCFICNGLHRIYECPNRATLRAFQATLTNDRAIEPEGPETDTPPEAPMTTLKAAKSTMVDSGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALP
IMGVAKRVSVKLGTWSGLVDFVIVRMDDFDIVLGMEFLLEHKVIPMPLAKCLVVTGSDPTIVQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVAEGRNSEEP
VPREIQRVLEAYTDKWNWTPECHAAFESLKKAMMEGPVLGIADVTRPFEVETDASDFALGGVLLQDGHPIAYESRKLNDAERRYAASEKEMLAVVHCLRAWRQYL
LGAKFVVKTDNSSVCHFFNQPQLSSKQARWQEYLAEFDFQFEHKPGRANQAVDALSRKSEHAALCMLAHLKASKLTGSIREAIRENLQNDPAAQAIIQLANEGKT
RQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPSLRDDVMQNVVKLWGVPESIVNDRDGRFTGTLWTELFRLLGSNLNIS
SSYHPQTDGQTKRFNTQFCFNCQKSTTTGRTPFEIVCGRQPVLPHVVDHPYVGKSPQAYNFTKEWRQSTEVARAYLEKASKHMKKWADKKRRPLEFQPGDQVIVK
LRPEQLRVQLPPWMKVHPVIHVSNLKSYHPDTVDPTRNEVTRPAVTLTNKIDKEVESILAERTRRVGRPRRDVQAFLVKWKGLLDEEIS