| GenBank top hits | e value | %identity | Alignment |
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| KAA0054278.1 gag/pol protein [Cucumis melo var. makuwa] | 5.3e-42 | 48.31 | Show/hide |
Query: VCNVYDKWITANDKANVYILASISIVIAKKHE--DTTYQSLTKNKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTF-KKKNATGKGLRPDPTTTTTK
V + YD+W ANDKA +YILA +S +++KKHE T Q + + G+ ++ ++ + + R F SSSGSK K+K GKG PT
Subjt: VCNVYDKWITANDKANVYILASISIVIAKKHE--DTTYQSLTKNKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTF-KKKNATGKGLRPDPTTTTTK
Query: KDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKR------RKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYK
K KAKVA KGKCFHCN++ HWKRN P +K+ R +LE EM LKVG G+VIS A VVIPDDGVEDPL+YK
Subjt: KDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKR------RKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYK
Query: KAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
+A+ D DKD+WVKAM+LEMESMYFNSVWELVD PDG
Subjt: KAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
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| KAA0065357.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-32 | 45.96 | Show/hide |
Query: QSLTKNKGHEGEANVATSK-KFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKA-KVAEKGKCFHCNIDGHWKRNYPNTWLKR-----
++L K KG E EANVAT+K KF RGS+SR K + SK +K GKG T+K+ K K EKGKC+HC +GHW RN P ++
Subjt: QSLTKNKGHEGEANVATSK-KFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKA-KVAEKGKCFHCNIDGHWKRNYPNTWLKR-----
Query: ---RKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQ
R S+ + + T +G + +GR+V QP RY+GL + Q++IPDDG+EDPLTYK+AM D D D+W+KAM+L+MESMY N VW LVDQ
Subjt: ---RKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQ
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| KAA0066192.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-35 | 39.86 | Show/hide |
Query: NKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKS---------
N EGEAN A S+ +F SS GSK K +N G G R PT K KAKVA KGKCFHCN+DGHWKRN P K+++
Subjt: NKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKS---------
Query: --------TKLEAGEMTLKVGTGEVISVVAVGEL------------------------------------------------------------------
+LE GEMTLKVGTG+VI+ A E
Subjt: --------TKLEAGEMTLKVGTGEVISVVAVGEL------------------------------------------------------------------
Query: ------------NGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
+GRIV QP RY+GLT+TQV IPDDGVEDPL+YK+A D DKD+W+KAMDLEME +YFNSVWELVD P+G
Subjt: ------------NGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
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| TYJ96859.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-35 | 49.75 | Show/hide |
Query: TYQSLTKNKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKS--
T+QS+ K +GE N+A S++F +TS +F+ K KKK GKG T K KAKVA K KCFH N+D HWKRN P +K+++
Subjt: TYQSLTKNKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKS--
Query: ----TKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
+LE GEMTLKVGTG+V+S A+ L P + + Q+VIPDDGV+DPL+ K+ M D DKD+WVKAMDLEMESMYFNSVWELVD P+G
Subjt: ----TKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
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| TYK23781.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 5.0e-32 | 39.45 | Show/hide |
Query: FNIEVNGDSIHSSSCKRIVVVCNVYDKWITANDKANVYILASISIVIAKKHEDTTYQSLTKNKGHEGEANVATSK-KFHRGSTSRGKFLSSSSGSKTFKK
FN+ ++I + + I ++ ++ + ++ ++NV + + +E T++SL K KG +GEANVATS KFHRG TS K + SSSG+K +KK
Subjt: FNIEVNGDSIHSSSCKRIVVVCNVYDKWITANDKANVYILASISIVIAKKHEDTTYQSLTKNKGHEGEANVATSK-KFHRGSTSRGKFLSSSSGSKTFKK
Query: KNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVI
K G+G + +P T K KAK A K CFHCN +GHWK+N P +L +K K LK+ E N + R++ L + + ++
Subjt: KNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVI
Query: --------PDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
++ + DPLT+KKAM+D DKD+W+KAM+LE+ESMYFNSVW+LVDQPDG
Subjt: --------PDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UH21 Gag/pol protein | 2.6e-42 | 48.31 | Show/hide |
Query: VCNVYDKWITANDKANVYILASISIVIAKKHE--DTTYQSLTKNKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTF-KKKNATGKGLRPDPTTTTTK
V + YD+W ANDKA +YILA +S +++KKHE T Q + + G+ ++ ++ + + R F SSSGSK K+K GKG PT
Subjt: VCNVYDKWITANDKANVYILASISIVIAKKHE--DTTYQSLTKNKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTF-KKKNATGKGLRPDPTTTTTK
Query: KDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKR------RKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYK
K KAKVA KGKCFHCN++ HWKRN P +K+ R +LE EM LKVG G+VIS A VVIPDDGVEDPL+YK
Subjt: KDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKR------RKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYK
Query: KAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
+A+ D DKD+WVKAM+LEMESMYFNSVWELVD PDG
Subjt: KAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
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| A0A5A7VE43 Gag/pol protein | 6.3e-33 | 45.96 | Show/hide |
Query: QSLTKNKGHEGEANVATSK-KFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKA-KVAEKGKCFHCNIDGHWKRNYPNTWLKR-----
++L K KG E EANVAT+K KF RGS+SR K + SK +K GKG T+K+ K K EKGKC+HC +GHW RN P ++
Subjt: QSLTKNKGHEGEANVATSK-KFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKA-KVAEKGKCFHCNIDGHWKRNYPNTWLKR-----
Query: ---RKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQ
R S+ + + T +G + +GR+V QP RY+GL + Q++IPDDG+EDPLTYK+AM D D D+W+KAM+L+MESMY N VW LVDQ
Subjt: ---RKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQ
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| A0A5D3BCS4 Gag/pol protein | 8.0e-36 | 49.75 | Show/hide |
Query: TYQSLTKNKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKS--
T+QS+ K +GE N+A S++F +TS +F+ K KKK GKG T K KAKVA K KCFH N+D HWKRN P +K+++
Subjt: TYQSLTKNKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKS--
Query: ----TKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
+LE GEMTLKVGTG+V+S A+ L P + + Q+VIPDDGV+DPL+ K+ M D DKD+WVKAMDLEMESMYFNSVWELVD P+G
Subjt: ----TKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
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| A0A5D3BR24 Gag/pol protein | 1.4e-35 | 39.86 | Show/hide |
Query: NKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKS---------
N EGEAN A S+ +F SS GSK K +N G G R PT K KAKVA KGKCFHCN+DGHWKRN P K+++
Subjt: NKGHEGEANVATSKKFHRGSTSRGKFLSSSSGSKTFKKKNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKS---------
Query: --------TKLEAGEMTLKVGTGEVISVVAVGEL------------------------------------------------------------------
+LE GEMTLKVGTG+VI+ A E
Subjt: --------TKLEAGEMTLKVGTGEVISVVAVGEL------------------------------------------------------------------
Query: ------------NGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
+GRIV QP RY+GLT+TQV IPDDGVEDPL+YK+A D DKD+W+KAMDLEME +YFNSVWELVD P+G
Subjt: ------------NGRIVLQPGRYVGLTKTQVVIPDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
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| A0A5D3DJD2 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 2.4e-32 | 39.45 | Show/hide |
Query: FNIEVNGDSIHSSSCKRIVVVCNVYDKWITANDKANVYILASISIVIAKKHEDTTYQSLTKNKGHEGEANVATSK-KFHRGSTSRGKFLSSSSGSKTFKK
FN+ ++I + + I ++ ++ + ++ ++NV + + +E T++SL K KG +GEANVATS KFHRG TS K + SSSG+K +KK
Subjt: FNIEVNGDSIHSSSCKRIVVVCNVYDKWITANDKANVYILASISIVIAKKHEDTTYQSLTKNKGHEGEANVATSK-KFHRGSTSRGKFLSSSSGSKTFKK
Query: KNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVI
K G+G + +P T K KAK A K CFHCN +GHWK+N P +L +K K LK+ E N + R++ L + + ++
Subjt: KNATGKGLRPDPTTTTTKKDKAKVAEKGKCFHCNIDGHWKRNYPNTWLKRRKSTKLEAGEMTLKVGTGEVISVVAVGELNGRIVLQPGRYVGLTKTQVVI
Query: --------PDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
++ + DPLT+KKAM+D DKD+W+KAM+LE+ESMYFNSVW+LVDQPDG
Subjt: --------PDDGVEDPLTYKKAMEDADKDKWVKAMDLEMESMYFNSVWELVDQPDG
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