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Moc06g26080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g26080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr6:19665936..19669136
RNA-Seq ExpressionMoc06g26080
SyntenyMoc06g26080
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061422.1 DNA-binding protein HEXBP-like [Cucumis melo var. makuwa]4.1e-1457.14Show/hide
Query:  TPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDIKPFKKKKNSGKGVKNDPTATAATKKNKAKVADKGKKF
        T NA+++ RDAYD+W K NDK  ++ILAS+SD+L++K E VVTAR+IM SL +I     K   GKG   DPTA AA  K KAKVA KGK+F
Subjt:  TPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDIKPFKKKKNSGKGVKNDPTATAATKKNKAKVADKGKKF

XP_022155999.1 uncharacterized protein LOC111022974 [Momordica charantia]2.2e-1580.36Show/hide
Query:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI
        AP PNAARASRDAYD+WIK NDK KVYILASISD+LAKKHE++V A+EIMDSL D+
Subjt:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI

XP_022156751.1 uncharacterized protein LOC111023591 [Momordica charantia]1.1e-1476.79Show/hide
Query:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI
        APT NAARAS+DAYD+WIK NDK K+YILA+IS++LAKKH+S+VTAREIMDSL D+
Subjt:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI

XP_022157449.1 uncharacterized protein LOC111024145 [Momordica charantia]1.5e-1683.93Show/hide
Query:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI
        APTPNAARASRDAYD+WIK NDK  VYIL SISD+L+KKHES+VTAREIMDSL DI
Subjt:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI

XP_022158202.1 uncharacterized protein LOC111024739 [Momordica charantia]8.3e-1578.18Show/hide
Query:  PTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI
        PTPNA RASRDAYD+WIK NDK KVYI ASISD+LAKKH+ +VT REIMDSL D+
Subjt:  PTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI

TrEMBL top hitse value%identityAlignment
A0A5D3DYM6 DNA-binding protein HEXBP-like2.0e-1457.14Show/hide
Query:  TPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDIKPFKKKKNSGKGVKNDPTATAATKKNKAKVADKGKKF
        T NA+++ RDAYD+W K NDK  ++ILAS+SD+L++K E VVTAR+IM SL +I     K   GKG   DPTA AA  K KAKVA KGK+F
Subjt:  TPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDIKPFKKKKNSGKGVKNDPTATAATKKNKAKVADKGKKF

A0A6J1DRZ2 uncharacterized protein LOC1110229741.1e-1580.36Show/hide
Query:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI
        AP PNAARASRDAYD+WIK NDK KVYILASISD+LAKKHE++V A+EIMDSL D+
Subjt:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI

A0A6J1DVX8 uncharacterized protein LOC1110235915.2e-1576.79Show/hide
Query:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI
        APT NAARAS+DAYD+WIK NDK K+YILA+IS++LAKKH+S+VTAREIMDSL D+
Subjt:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI

A0A6J1DWI4 uncharacterized protein LOC1110241457.3e-1783.93Show/hide
Query:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI
        APTPNAARASRDAYD+WIK NDK  VYIL SISD+L+KKHES+VTAREIMDSL DI
Subjt:  APTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI

A0A6J1DWL4 uncharacterized protein LOC1110247394.0e-1578.18Show/hide
Query:  PTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI
        PTPNA RASRDAYD+WIK NDK KVYI ASISD+LAKKH+ +VT REIMDSL D+
Subjt:  PTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESVVTAREIMDSLPDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGAAGTGGGAAAGTGGTGAGTGGGGAAGTTGTGACTTCCCTACTACTCTTCCTCCATTATAAAAAGAGAGGCGCTGGGAACCGGCGCTTAGGCGCTGCC
AGAGCTGCAGAAACCCGAGAGCTCGAGCCTGCAGTAGTGGATGCAGCGCCTAGCATGTCTACTTCCGTGATTGCCCTGCTTGCCCCCACGCCTAATGCAGCCCGA
GCCAGTCGGGATGCCTATGACAAATGGATCAAGACCAATGACAAGACTAAGGTCTACATCTTGGCAAGCATATCTGATTTGTTGGCCAAGAAGCATGAGAGCGTG
GTCACCGCAAGGGAGATCATGGACTCATTGCCAGACATTAAGCCTTTTAAGAAGAAGAAGAACAGTGGTAAAGGGGTGAAAAATGACCCTACTGCTACTGCTGCT
ACCAAGAAGAACAAGGCCAAAGTTGCAGACAAAGGAAAAAAATTTCTACTGCAACCTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGAAGTGGGAAAGTGGTGAGTGGGGAAGTTGTGACTTCCCTACTACTCTTCCTCCATTATAAAAAGAGAGGCGCTGGGAACCGGCGCTTAGGCGCTGCC
AGAGCTGCAGAAACCCGAGAGCTCGAGCCTGCAGTAGTGGATGCAGCGCCTAGCATGTCTACTTCCGTGATTGCCCTGCTTGCCCCCACGCCTAATGCAGCCCGA
GCCAGTCGGGATGCCTATGACAAATGGATCAAGACCAATGACAAGACTAAGGTCTACATCTTGGCAAGCATATCTGATTTGTTGGCCAAGAAGCATGAGAGCGTG
GTCACCGCAAGGGAGATCATGGACTCATTGCCAGACATTAAGCCTTTTAAGAAGAAGAAGAACAGTGGTAAAGGGGTGAAAAATGACCCTACTGCTACTGCTGCT
ACCAAGAAGAACAAGGCCAAAGTTGCAGACAAAGGAAAAAAATTTCTACTGCAACCTGGATGA
Protein sequenceShow/hide protein sequence
MVGSGKVVSGEVVTSLLLFLHYKKRGAGNRRLGAARAAETRELEPAVVDAAPSMSTSVIALLAPTPNAARASRDAYDKWIKTNDKTKVYILASISDLLAKKHESV
VTAREIMDSLPDIKPFKKKKNSGKGVKNDPTATAATKKNKAKVADKGKKFLLQPG