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Moc06g26210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g26210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:19768794..19769162
RNA-Seq ExpressionMoc06g26210
SyntenyMoc06g26210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136678.1 uncharacterized protein LOC111008330 [Momordica charantia]4.1e-2247.33Show/hide
Query:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSY---------RIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHI
        MEKYL KVR   A    Y + +VP+SEN+ TDALAKLAS+Y         + +L  S+PVEIL+ LS+ E   M  +   P+W+DPI  F+ G  L +  
Subjt:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSY---------RIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHI

Query:  NLKKARRKAAWYVLKGDVLYKRGFSLPLLRC
          KK   KAAW++L+   LY+RGFSLPLL+C
Subjt:  NLKKARRKAAWYVLKGDVLYKRGFSLPLLRC

XP_022143565.1 uncharacterized protein LOC111013434 [Momordica charantia]5.3e-2249.18Show/hide
Query:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA
        MEKYL KVR   A+   Y I ++P+S+N+ +DALAKLAS+Y  +L  S+PVEIL+  S+ E   M  +   P+WM+PIK FL G+   +    KK  RKA
Subjt:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA

Query:  AWYVLKGDVLYKRGFSLPLLRC
        A Y+L+   LY+RGF LPLL+C
Subjt:  AWYVLKGDVLYKRGFSLPLLRC

XP_022150100.1 uncharacterized protein LOC111018362 [Momordica charantia]1.1e-2249.18Show/hide
Query:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA
        MEKYL KVR   A    Y + +VP+SEN+  DALAKLAS+Y  +L  S+PVEIL++ S+ E   M  +  +P+WMDPI  F+ G  L +    KK  R+A
Subjt:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA

Query:  AWYVLKGDVLYKRGFSLPLLRC
        A + L+   LY+RGFSLPLL+C
Subjt:  AWYVLKGDVLYKRGFSLPLLRC

XP_022151715.1 uncharacterized protein LOC111019628 [Momordica charantia]4.1e-2249.18Show/hide
Query:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA
        MEKYL +VR   A    Y + +VP+SEN+  DALAKLAS+Y  +L  S+PVEIL+  S+ +   M  ++ +P+WMDPI  F+ G    E    KK  RKA
Subjt:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA

Query:  AWYVLKGDVLYKRGFSLPLLRC
        A +VL+   LY+RGFSLPLL+C
Subjt:  AWYVLKGDVLYKRGFSLPLLRC

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]9.1e-2248.78Show/hide
Query:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLP-EHINLKKARRK
        ME+YL K R L A   +Y I +VP+SEN+  D LA+LAS+Y  +LP ++PVEIL   SV + + M      PTWMDPIK FL    +P +    +K RR+
Subjt:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLP-EHINLKKARRK

Query:  AAWYVLKGDVLYKRGFSLPLLRC
        AA Y+++   L+KRG+SLPLLRC
Subjt:  AAWYVLKGDVLYKRGFSLPLLRC

TrEMBL top hitse value%identityAlignment
A0A6J1C878 Ribonuclease H2.0e-2247.33Show/hide
Query:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSY---------RIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHI
        MEKYL KVR   A    Y + +VP+SEN+ TDALAKLAS+Y         + +L  S+PVEIL+ LS+ E   M  +   P+W+DPI  F+ G  L +  
Subjt:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSY---------RIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHI

Query:  NLKKARRKAAWYVLKGDVLYKRGFSLPLLRC
          KK   KAAW++L+   LY+RGFSLPLL+C
Subjt:  NLKKARRKAAWYVLKGDVLYKRGFSLPLLRC

A0A6J1CP53 Ribonuclease H2.6e-2249.18Show/hide
Query:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA
        MEKYL KVR   A+   Y I ++P+S+N+ +DALAKLAS+Y  +L  S+PVEIL+  S+ E   M  +   P+WM+PIK FL G+   +    KK  RKA
Subjt:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA

Query:  AWYVLKGDVLYKRGFSLPLLRC
        A Y+L+   LY+RGF LPLL+C
Subjt:  AWYVLKGDVLYKRGFSLPLLRC

A0A6J1D7J6 Ribonuclease H5.2e-2349.18Show/hide
Query:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA
        MEKYL KVR   A    Y + +VP+SEN+  DALAKLAS+Y  +L  S+PVEIL++ S+ E   M  +  +P+WMDPI  F+ G  L +    KK  R+A
Subjt:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA

Query:  AWYVLKGDVLYKRGFSLPLLRC
        A + L+   LY+RGFSLPLL+C
Subjt:  AWYVLKGDVLYKRGFSLPLLRC

A0A6J1DBZ0 uncharacterized protein LOC1110196282.0e-2249.18Show/hide
Query:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA
        MEKYL +VR   A    Y + +VP+SEN+  DALAKLAS+Y  +L  S+PVEIL+  S+ +   M  ++ +P+WMDPI  F+ G    E    KK  RKA
Subjt:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKA

Query:  AWYVLKGDVLYKRGFSLPLLRC
        A +VL+   LY+RGFSLPLL+C
Subjt:  AWYVLKGDVLYKRGFSLPLLRC

A0A6J1DWM2 Ribonuclease H4.4e-2248.78Show/hide
Query:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLP-EHINLKKARRK
        ME+YL K R L A   +Y I +VP+SEN+  D LA+LAS+Y  +LP ++PVEIL   SV + + M      PTWMDPIK FL    +P +    +K RR+
Subjt:  MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLP-EHINLKKARRK

Query:  AAWYVLKGDVLYKRGFSLPLLRC
        AA Y+++   L+KRG+SLPLLRC
Subjt:  AAWYVLKGDVLYKRGFSLPLLRC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAATACTTACGCAAGGTGCGCGAGCTGCAAGCTTGGCTGCTGGAATACACCATCGAACGGGTACCCCAGAGCGAAAATGCCACCACTGACGCCCTGGCGAAGCT
GGCATCTTCCTACCGGATCGAGCTCCCTGAGTCGATTCCGGTTGAAATTCTAGAAGCACTCTCTGTTCAGGAGTTGAAAGCGATGAGCGCAGAGGTAATGGCCCCAACCT
GGATGGATCCCATAAAAGCCTTCCTTTGCGGGGAAGGCCTACCAGAACATATCAACCTCAAGAAGGCACGGCGCAAGGCGGCGTGGTACGTCCTCAAAGGTGACGTGCTG
TATAAACGGGGATTCTCCCTCCCATTATTGAGATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAATACTTACGCAAGGTGCGCGAGCTGCAAGCTTGGCTGCTGGAATACACCATCGAACGGGTACCCCAGAGCGAAAATGCCACCACTGACGCCCTGGCGAAGCT
GGCATCTTCCTACCGGATCGAGCTCCCTGAGTCGATTCCGGTTGAAATTCTAGAAGCACTCTCTGTTCAGGAGTTGAAAGCGATGAGCGCAGAGGTAATGGCCCCAACCT
GGATGGATCCCATAAAAGCCTTCCTTTGCGGGGAAGGCCTACCAGAACATATCAACCTCAAGAAGGCACGGCGCAAGGCGGCGTGGTACGTCCTCAAAGGTGACGTGCTG
TATAAACGGGGATTCTCCCTCCCATTATTGAGATGCTAG
Protein sequenceShow/hide protein sequence
MEKYLRKVRELQAWLLEYTIERVPQSENATTDALAKLASSYRIELPESIPVEILEALSVQELKAMSAEVMAPTWMDPIKAFLCGEGLPEHINLKKARRKAAWYVLKGDVL
YKRGFSLPLLRC