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Moc06g26220 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g26220
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:19770926..19772318
RNA-Seq ExpressionMoc06g26220
SyntenyMoc06g26220
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149985.1 uncharacterized protein LOC111018267 [Momordica charantia]2.2e-1471.43Show/hide
Query:  KSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST
        +S YNAIFGRPIIH  Q VPSTLH  +KY TP GVGTI+GEQKTSREC+  TLK +
Subjt:  KSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST

XP_022152367.1 uncharacterized protein LOC111020111 [Momordica charantia]1.7e-1455.41Show/hide
Query:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST
        GQ    +T + +F+    +  YNAIFGRPIIH  + VPSTLH  +KY TP GVGT++GEQKTSREC+  TLK +
Subjt:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST

XP_022155866.1 uncharacterized protein LOC111022880 [Momordica charantia]7.6e-1554.17Show/hide
Query:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLK
        GQ +  +T + +F+    +S YNAIFGRPIIH  + +PSTLH  +KYPTP GVGT++GEQ  SREC+   LK
Subjt:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLK

XP_022157676.1 uncharacterized protein LOC111024332 [Momordica charantia]3.8e-1452.7Show/hide
Query:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST
        GQ +  +T + +F+    +STYNAIFGRPIIH  + +PSTLH  +KY TP GVGT++GEQ  SREC+   LK +
Subjt:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST

XP_022158651.1 uncharacterized protein LOC111025110 [Momordica charantia]1.0e-1963.37Show/hide
Query:  QYLLMIRQKPGESLRDYVRAFLAAQFTVSCNEEFACLMFALRVCHEQLKWSLAKKLEFTIKASIERVRKLMQVSELIQSQKDPPGRTSPTRERRGQHEGR
        QYLL IRQ+ GESLR+YVR FLAAQ TVSCN+EFA      RV  EQLKWS  KK +FTIKASIE  RK MQ + LIQS ++ P R S T ERRG+   R
Subjt:  QYLLMIRQKPGESLRDYVRAFLAAQFTVSCNEEFACLMFALRVCHEQLKWSLAKKLEFTIKASIERVRKLMQVSELIQSQKDPPGRTSPTRERRGQHEGR

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A6J1D787 uncharacterized protein LOC1110182671.1e-1471.43Show/hide
Query:  KSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST
        +S YNAIFGRPIIH  Q VPSTLH  +KY TP GVGTI+GEQKTSREC+  TLK +
Subjt:  KSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST

A0A6J1DG07 uncharacterized protein LOC1110201118.2e-1555.41Show/hide
Query:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST
        GQ    +T + +F+    +  YNAIFGRPIIH  + VPSTLH  +KY TP GVGT++GEQKTSREC+  TLK +
Subjt:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST

A0A6J1DT04 uncharacterized protein LOC1110228803.7e-1554.17Show/hide
Query:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLK
        GQ +  +T + +F+    +S YNAIFGRPIIH  + +PSTLH  +KYPTP GVGT++GEQ  SREC+   LK
Subjt:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLK

A0A6J1DYW5 uncharacterized protein LOC1110243321.8e-1452.7Show/hide
Query:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST
        GQ +  +T + +F+    +STYNAIFGRPIIH  + +PSTLH  +KY TP GVGT++GEQ  SREC+   LK +
Subjt:  GQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKTSRECHVVTLKST

A0A6J1E1K0 uncharacterized protein LOC1110251105.0e-2063.37Show/hide
Query:  QYLLMIRQKPGESLRDYVRAFLAAQFTVSCNEEFACLMFALRVCHEQLKWSLAKKLEFTIKASIERVRKLMQVSELIQSQKDPPGRTSPTRERRGQHEGR
        QYLL IRQ+ GESLR+YVR FLAAQ TVSCN+EFA      RV  EQLKWS  KK +FTIKASIE  RK MQ + LIQS ++ P R S T ERRG+   R
Subjt:  QYLLMIRQKPGESLRDYVRAFLAAQFTVSCNEEFACLMFALRVCHEQLKWSLAKKLEFTIKASIERVRKLMQVSELIQSQKDPPGRTSPTRERRGQHEGR

Query:  R
        R
Subjt:  R

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTAGCAGTTACTGCCCCAGTCCATTTCCTCTTGGAAGTAGTTCTGCAAGGTGTTTGTAACCCAGTTCGCCACACAAGAAGAGACTCAGAAGTAGTTCTCCAGTA
CCTGCTCATGATAAGGCAGAAGCCAGGGGAGAGTTTGAGGGACTACGTAAGGGCGTTCCTCGCTGCGCAGTTCACGGTGTCGTGCAACGAAGAGTTCGCCTGCTTGATGT
TTGCCTTGAGAGTATGCCACGAACAACTAAAGTGGTCGCTTGCCAAAAAACTTGAGTTCACCATCAAAGCCAGCATTGAGAGGGTAAGGAAGCTCATGCAAGTTAGTGAG
CTCATCCAATCGCAGAAAGACCCGCCAGGCAGGACTAGCCCAACTCGAGAAAGAAGAGGTCAGCATGAAGGTCGCCGCCACGCCAGCAACAACATGAGCGCCACTCTCGA
TAAAAGCAAGATCAAAAGCACGACTGACCTGAACGGTCAGCTCAGACCTAGCCTCACCCCTTTGGTCGATTTTCTAGGAGAACCGGTTAAGTCGACGTACAATGCAATAT
TTGGCCGACCTATCATCCACGACCTGCAAGTTGTGCCATCCACACTACATCATGCGATGAAATATCCAACTCCCAAGGGAGTGGGGACGATACAAGGCGAACAAAAGACT
TCGAGGGAATGTCACGTGGTGACCCTCAAATCAACTTGCAACGCATTCACTGGGGGCCCCAAGCTTCAAGGAGCTAAGTCACTCGACGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTACTAGCAGTTACTGCCCCAGTCCATTTCCTCTTGGAAGTAGTTCTGCAAGGTGTTTGTAACCCAGTTCGCCACACAAGAAGAGACTCAGAAGTAGTTCTCCAGTA
CCTGCTCATGATAAGGCAGAAGCCAGGGGAGAGTTTGAGGGACTACGTAAGGGCGTTCCTCGCTGCGCAGTTCACGGTGTCGTGCAACGAAGAGTTCGCCTGCTTGATGT
TTGCCTTGAGAGTATGCCACGAACAACTAAAGTGGTCGCTTGCCAAAAAACTTGAGTTCACCATCAAAGCCAGCATTGAGAGGGTAAGGAAGCTCATGCAAGTTAGTGAG
CTCATCCAATCGCAGAAAGACCCGCCAGGCAGGACTAGCCCAACTCGAGAAAGAAGAGGTCAGCATGAAGGTCGCCGCCACGCCAGCAACAACATGAGCGCCACTCTCGA
TAAAAGCAAGATCAAAAGCACGACTGACCTGAACGGTCAGCTCAGACCTAGCCTCACCCCTTTGGTCGATTTTCTAGGAGAACCGGTTAAGTCGACGTACAATGCAATAT
TTGGCCGACCTATCATCCACGACCTGCAAGTTGTGCCATCCACACTACATCATGCGATGAAATATCCAACTCCCAAGGGAGTGGGGACGATACAAGGCGAACAAAAGACT
TCGAGGGAATGTCACGTGGTGACCCTCAAATCAACTTGCAACGCATTCACTGGGGGCCCCAAGCTTCAAGGAGCTAAGTCACTCGACGAGTAA
Protein sequenceShow/hide protein sequence
MVLAVTAPVHFLLEVVLQGVCNPVRHTRRDSEVVLQYLLMIRQKPGESLRDYVRAFLAAQFTVSCNEEFACLMFALRVCHEQLKWSLAKKLEFTIKASIERVRKLMQVSE
LIQSQKDPPGRTSPTRERRGQHEGRRHASNNMSATLDKSKIKSTTDLNGQLRPSLTPLVDFLGEPVKSTYNAIFGRPIIHDLQVVPSTLHHAMKYPTPKGVGTIQGEQKT
SRECHVVTLKSTCNAFTGGPKLQGAKSLDE