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Moc06g26360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g26360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:19912288..19912867
RNA-Seq ExpressionMoc06g26360
SyntenyMoc06g26360
Gene Ontology termsGO:0006955 - immune response (biological process)
GO:0098542 - defense response to other organism (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5758504.1 putative RNA-directed DNA polymerase [Helianthus annuus]2.7e-0569.05Show/hide
Query:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALI
        MKPILMYGK+TL +A+VT KLLSEE+RL S G TS E + LI
Subjt:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALI

KAF5765959.1 putative RNA-directed DNA polymerase [Helianthus annuus]2.7e-0569.05Show/hide
Query:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALI
        MKPILMYGK+TL +A+VT KLLSEE+RL S G TS E + LI
Subjt:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALI

PHT35790.1 hypothetical protein CQW23_23490 [Capsicum baccatum]2.7e-0567.44Show/hide
Query:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV
        M+PILMYGK+T+ F+EVTSKL+SEE+RLK+    S EDSAL+V
Subjt:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]4.6e-1397.67Show/hide
Query:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV
        MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSAL+V
Subjt:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV

XP_022145135.1 uncharacterized protein LOC111014651 [Momordica charantia]1.1e-0682.05Show/hide
Query:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDS
        MKPILMYGKD LNFAE TSKLL E+RRLKSEGRTS  D+
Subjt:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDS

TrEMBL top hitse value%identityAlignment
A0A2G2VS38 CCHC-type domain-containing protein1.3e-0567.44Show/hide
Query:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV
        M+PILMYGK+T+ F+EVTSKL+SEE+RLK+    S EDSAL+V
Subjt:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV

A0A2G3BP06 Uncharacterized protein1.5e-0462.79Show/hide
Query:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV
        M+PILMYGK+ + F+EVTS+L+SEE+RLK+    S EDSAL+V
Subjt:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV

A0A2P5DGF9 Zinc finger, CCHC-type2.5e-0465.12Show/hide
Query:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV
        MKPIL+YGK+T+ F+EVTS LLSEERRL   G  S E S L V
Subjt:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV

A0A6J1CG82 uncharacterized protein LOC1110105212.2e-1397.67Show/hide
Query:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV
        MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSAL+V
Subjt:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIV

A0A6J1CTL7 uncharacterized protein LOC1110146515.3e-0782.05Show/hide
Query:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDS
        MKPILMYGKD LNFAE TSKLL E+RRLKSEGRTS  D+
Subjt:  MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCGATCTTGATGTATGGGAAGGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCAGAGGAAAGAAGGCTGAAGAGTGAAGGGCGTACTTCA
CATGAAGATTCGGCACTGATTGTCCCAACAGAGCCGGTTCGTCAAAGGGCTTTGGGCGGGATGCTGACAATGTTTCTCTCATCAGGGGAGACGATGATCAGTTCC
TTTGAAGAGAGAGAGAATTTATCCTCATGGTATGTCCGCTTTACCATGATAGAGGATGTGATGTTAGCGGTTCCACAAGTTTACACATGGGCATTGAATTGGCGG
TTATGCAAGGTGTGTGTGGTGGAAGTTATGTCGATGCCTGAAGAACTTCCAATTGAGCCAAGTAGGTGGAAGTTGCACCATAAATCTCAGCAGGATTTATCGACA
TGTGACGAGGAAGAAAACTCTTGGACGACGGCATTCCAAGTGATCTATTTTTTATGGTGGAGTAGACTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCGATCTTGATGTATGGGAAGGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCAGAGGAAAGAAGGCTGAAGAGTGAAGGGCGTACTTCA
CATGAAGATTCGGCACTGATTGTCCCAACAGAGCCGGTTCGTCAAAGGGCTTTGGGCGGGATGCTGACAATGTTTCTCTCATCAGGGGAGACGATGATCAGTTCC
TTTGAAGAGAGAGAGAATTTATCCTCATGGTATGTCCGCTTTACCATGATAGAGGATGTGATGTTAGCGGTTCCACAAGTTTACACATGGGCATTGAATTGGCGG
TTATGCAAGGTGTGTGTGGTGGAAGTTATGTCGATGCCTGAAGAACTTCCAATTGAGCCAAGTAGGTGGAAGTTGCACCATAAATCTCAGCAGGATTTATCGACA
TGTGACGAGGAAGAAAACTCTTGGACGACGGCATTCCAAGTGATCTATTTTTTATGGTGGAGTAGACTATAG
Protein sequenceShow/hide protein sequence
MKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALIVPTEPVRQRALGGMLTMFLSSGETMISSFEERENLSSWYVRFTMIEDVMLAVPQVYTWALNWR
LCKVCVVEVMSMPEELPIEPSRWKLHHKSQQDLSTCDEEENSWTTAFQVIYFLWWSRL