; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g26370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g26370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:19913086..19922762
RNA-Seq ExpressionMoc06g26370
SyntenyMoc06g26370
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5463231.1 hypothetical protein F2P56_019161 [Juglans regia]4.7e-2360Show/hide
Query:  VKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANVHGIS
        ++ +VEKFDGRINFGLWQVQVKDVLIQ GLHKALKGRP+   S   S           + +   +  MSDEDWE++DLR +SAIR  LAKN+LAN+HGIS
Subjt:  VKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANVHGIS

Query:  TAEEL
        TA++L
Subjt:  TAEEL

KAF7802225.1 cytochrome p450 [Senna tora]6.6e-2563.39Show/hide
Query:  MSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNIL
        MS F S VK DVEKFDGRINFGLWQVQVKDVLIQ GLHKAL+G+ S   SEK                   + SMSD DWEE+DLR +S IR SLAKN+L
Subjt:  MSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNIL

Query:  ANVHGISTAEEL
        ANV GISTA+EL
Subjt:  ANVHGISTAEEL

KAG7968253.1 hypothetical protein I3843_08G145100 [Carya illinoinensis]4.7e-2363.73Show/hide
Query:  DVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRG-SKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANVHGISTA
        +VEKFDGRINFGLWQ+QVKDVLIQ GLHKALK RP+            P  S+G S  G   ++ MSDE+WE++DLRT+SAIR  LAKN+LANVHGISTA
Subjt:  DVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRG-SKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANVHGISTA

Query:  EE
        +E
Subjt:  EE

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]4.2e-4891.45Show/hide
Query:  ECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSL
        ECEADMSFFMSPVKIDVEKFDG INFGLWQVQVKDVLIQ  LHKALKGRPSEGASEKLS DGGPMESSGGSSRGSKK SMS EDWEEMDLR +SAIRTSL
Subjt:  ECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSL

Query:  AKNILANVHGISTAEEL
        AKNILANVH ISTA+EL
Subjt:  AKNILANVHGISTAEEL

XP_022154929.1 uncharacterized protein LOC111022075 [Momordica charantia]4.5e-2667.59Show/hide
Query:  ESYGGNSALANMVAFDNALLEAD------LMEAKECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPME
        ES   NS LA +  F +++          L   +ECEAD+SF MSPVKIDVEKFD  INFGLWQVQVKDV+IQ GLHKALKGRPSE ASEKLSGDGGPME
Subjt:  ESYGGNSALANMVAFDNALLEAD------LMEAKECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPME

Query:  SSGGSSRG
        SS GS RG
Subjt:  SSGGSSRG

TrEMBL top hitse value%identityAlignment
A0A2G2XLY2 Uncharacterized protein5.6e-2258.65Show/hide
Query:  KIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANVHGIST
        K ++EKFDGRINFGLWQVQVKDVLIQ GLHK LK RP+ G  +K S           SS+ S+K  +SDE+WEE+D++ +S IR  LAKN+LANV G+ST
Subjt:  KIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANVHGIST

Query:  AEEL
         +EL
Subjt:  AEEL

A0A2G3AGH4 Uncharacterized protein3.3e-2260.58Show/hide
Query:  KIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANVHGIST
        K ++EKFDGRINFGLWQVQVKDVLIQ GLHKALK RP+   SEK   D    E    SS+ S+K+ ++DE+WEE+D++ +S IR  LAKN+LANV G+ST
Subjt:  KIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANVHGIST

Query:  AEEL
         +EL
Subjt:  AEEL

A0A2P5D0W5 Pol-like polyprotein/retrotransposon2.5e-2259.63Show/hide
Query:  FMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANV
        F +PV+ DVEKFDG INFGLWQ+QVKD+LIQ GLHKALKGR      E L G            R S+K SMSDEDWE++D R +SAIR  LAKN+LANV
Subjt:  FMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANV

Query:  HGISTAEEL
          I+TA++L
Subjt:  HGISTAEEL

A0A6J1CG82 uncharacterized protein LOC1110105212.0e-4891.45Show/hide
Query:  ECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSL
        ECEADMSFFMSPVKIDVEKFDG INFGLWQVQVKDVLIQ  LHKALKGRPSEGASEKLS DGGPMESSGGSSRGSKK SMS EDWEEMDLR +SAIRTSL
Subjt:  ECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSL

Query:  AKNILANVHGISTAEEL
        AKNILANVH ISTA+EL
Subjt:  AKNILANVHGISTAEEL

A0A6J1DNQ5 uncharacterized protein LOC1110220752.2e-2667.59Show/hide
Query:  ESYGGNSALANMVAFDNALLEAD------LMEAKECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPME
        ES   NS LA +  F +++          L   +ECEAD+SF MSPVKIDVEKFD  INFGLWQVQVKDV+IQ GLHKALKGRPSE ASEKLSGDGGPME
Subjt:  ESYGGNSALANMVAFDNALLEAD------LMEAKECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPME

Query:  SSGGSSRG
        SS GS RG
Subjt:  SSGGSSRG

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.2e-0633.33Show/hide
Query:  MSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANVH
        MS VK +V KF+G   F  WQ +++D+LIQ GLHK L                             K  +M  EDW ++D R +SAIR  L+ +++ N+ 
Subjt:  MSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDWEEMDLRTSSAIRTSLAKNILANVH

Query:  GISTA
           TA
Subjt:  GISTA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCCGGAGTCAGCATTTAAGGGAACACTCATCTACTCCCCTAAAGTCGGGGAGGAGTGAATTCCATCTTGTGAAGTTA
TGTTCCCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATATTGAGTCGACGACTCGGGCCACTCTCACCCATACAGATCAAAGGACGAGCCCTCACGGG
CAGGAGTCCATAACTCACTCAGGATTGAGAATGAGTTGCCTGGTCATCCTAAGAAATAGCAATCTATTAGTTAACGGTGTTACACCTAAAGATTGCCTAGTTCGC
GGAGATTCAAGAAAGTCAGCCACATCCAAACTTGTAATGTTGGCAGCGTCAAAGATATCACCATCCTGTGTGTGGGGTTTTGGCGGTGGGGCTCGGTCATCAGTC
TTGATTGATCGCCGGCCGAGTAGCTGTTGTCTTTGCTGGTGCGATGATCGGCTGTGGGTTGTTCGTTTGATTTCGTCTTCATTCCTCAAGGCGATGCACAAACAC
CAGAAAACGAGGGGCGGTGGTCTGACGAGGCTTGTTTTCTCTCCGTCCTCGTCTCTGTCTTTGGGGTTGGAGCGGTGGGTTGTGGAGGTGGATGGTGCTAGGGTG
TTGCATGGACCGGTTGAGGCTGGAGGGGCCGTGAAATTGCCCGGTTCAGGGGGTTTAGTCAATGGTTCTCCTCGTGCGAGTGCTTCGGATAGTGAGTTTGGTGGT
GGAGGTGCCTCGGGTGGGGTGGCAAGGATGGTGGGCAAGATCTGGGTAGGTACTGAAGTGCCAACTATTACTTATTTGGATAATGGCCTTATCTTATTCCAATAT
TGCCACAGTTCTTCGCGGGACTGGGTGGGACTAGGTTACTGTTCAGTGATGGGTGGTTTTAATGTCATTCGAAGCTCCTCAGAGTCTTATGGTGGGAACTCGGCG
TTGGCAAATATGGTTGCTTTTGATAATGCGTTATTGGAAGCGGATTTGATGGAGGCTAAGGAGTGTGAAGCAGATATGTCATTCTTTATGAGTCCAGTGAAGATT
GACGTGGAGAAATTTGACGGAAGGATCAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGCTGATACAATATGGGTTACACAAGGCGTTGAAGGGAAGACCG
AGTGAAGGTGCTTCGGAAAAGCTAAGCGGTGATGGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGGTTCTAAGAAATATAGCATGAGTGATGAAGATTGG
GAGGAAATGGATTTGAGAACTTCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGTGCATGGAATTTCGACAGCCGAAGAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCCGGAGTCAGCATTTAAGGGAACACTCATCTACTCCCCTAAAGTCGGGGAGGAGTGAATTCCATCTTGTGAAGTTA
TGTTCCCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATATTGAGTCGACGACTCGGGCCACTCTCACCCATACAGATCAAAGGACGAGCCCTCACGGG
CAGGAGTCCATAACTCACTCAGGATTGAGAATGAGTTGCCTGGTCATCCTAAGAAATAGCAATCTATTAGTTAACGGTGTTACACCTAAAGATTGCCTAGTTCGC
GGAGATTCAAGAAAGTCAGCCACATCCAAACTTGTAATGTTGGCAGCGTCAAAGATATCACCATCCTGTGTGTGGGGTTTTGGCGGTGGGGCTCGGTCATCAGTC
TTGATTGATCGCCGGCCGAGTAGCTGTTGTCTTTGCTGGTGCGATGATCGGCTGTGGGTTGTTCGTTTGATTTCGTCTTCATTCCTCAAGGCGATGCACAAACAC
CAGAAAACGAGGGGCGGTGGTCTGACGAGGCTTGTTTTCTCTCCGTCCTCGTCTCTGTCTTTGGGGTTGGAGCGGTGGGTTGTGGAGGTGGATGGTGCTAGGGTG
TTGCATGGACCGGTTGAGGCTGGAGGGGCCGTGAAATTGCCCGGTTCAGGGGGTTTAGTCAATGGTTCTCCTCGTGCGAGTGCTTCGGATAGTGAGTTTGGTGGT
GGAGGTGCCTCGGGTGGGGTGGCAAGGATGGTGGGCAAGATCTGGGTAGGTACTGAAGTGCCAACTATTACTTATTTGGATAATGGCCTTATCTTATTCCAATAT
TGCCACAGTTCTTCGCGGGACTGGGTGGGACTAGGTTACTGTTCAGTGATGGGTGGTTTTAATGTCATTCGAAGCTCCTCAGAGTCTTATGGTGGGAACTCGGCG
TTGGCAAATATGGTTGCTTTTGATAATGCGTTATTGGAAGCGGATTTGATGGAGGCTAAGGAGTGTGAAGCAGATATGTCATTCTTTATGAGTCCAGTGAAGATT
GACGTGGAGAAATTTGACGGAAGGATCAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGCTGATACAATATGGGTTACACAAGGCGTTGAAGGGAAGACCG
AGTGAAGGTGCTTCGGAAAAGCTAAGCGGTGATGGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGGTTCTAAGAAATATAGCATGAGTGATGAAGATTGG
GAGGAAATGGATTTGAGAACTTCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGTGCATGGAATTTCGACAGCCGAAGAACTTTGA
Protein sequenceShow/hide protein sequence
MRGWGPLFKSRSQHLREHSSTPLKSGRSEFHLVKLCSQLPTRSRPQNGRNIESTTRATLTHTDQRTSPHGQESITHSGLRMSCLVILRNSNLLVNGVTPKDCLVR
GDSRKSATSKLVMLAASKISPSCVWGFGGGARSSVLIDRRPSSCCLCWCDDRLWVVRLISSSFLKAMHKHQKTRGGGLTRLVFSPSSSLSLGLERWVVEVDGARV
LHGPVEAGGAVKLPGSGGLVNGSPRASASDSEFGGGGASGGVARMVGKIWVGTEVPTITYLDNGLILFQYCHSSSRDWVGLGYCSVMGGFNVIRSSSESYGGNSA
LANMVAFDNALLEADLMEAKECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVKDVLIQYGLHKALKGRPSEGASEKLSGDGGPMESSGGSSRGSKKYSMSDEDW
EEMDLRTSSAIRTSLAKNILANVHGISTAEEL