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Moc06g26410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g26410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr6:19945688..19947154
RNA-Seq ExpressionMoc06g26410
SyntenyMoc06g26410
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045415.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.1e-1360Show/hide
Query:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRYSADGI
        LA++ KMLRN+ I LVKVLWRNH+VEEATW+RED+++ +YPE FE+E F R   CN P +   GI
Subjt:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRYSADGI

TYJ98696.1 pol protein [Cucumis melo var. makuwa]6.9e-1263.33Show/hide
Query:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRY
        LA+E KMLRN+ I LVKVLW++H+VEEATW+RED+ + +YPE FEDE   R E CNAP++
Subjt:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRY

TYK04267.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.1e-1360Show/hide
Query:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRYSADGI
        LA++ KMLRN+ I LVKVLWRNH+VEEATW+RED+++ +YPE FE+E F R   CN P +   GI
Subjt:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRYSADGI

XP_022156881.1 uncharacterized protein LOC111023717 [Momordica charantia]4.1e-1772.46Show/hide
Query:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPE-----SFEDERFSRGEVCNAPRYSADG
        LAKETK+LRN+ IDLVK+LWRNHQVEEATWEREDEI+ +Y E     +F+DE F RGEVCNAPRYS  G
Subjt:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPE-----SFEDERFSRGEVCNAPRYSADG

XP_022157851.1 uncharacterized protein LOC111024467 [Momordica charantia]7.1e-1775.76Show/hide
Query:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPE-----SFEDERFSRGEVCNAPRYS
        LAKETK+LRN +IDLVKV WRNHQVEE TWEREDEIK +YPE     +FEDE F RGEVCNAP YS
Subjt:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPE-----SFEDERFSRGEVCNAPRYS

TrEMBL top hitse value%identityAlignment
A0A5A7TVJ8 DNA/RNA polymerases superfamily protein3.9e-1360Show/hide
Query:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRYSADGI
        LA++ KMLRN+ I LVKVLWRNH+VEEATW+RED+++ +YPE FE+E F R   CN P +   GI
Subjt:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRYSADGI

A0A5D3BHZ9 Pol protein3.3e-1263.33Show/hide
Query:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRY
        LA+E KMLRN+ I LVKVLW++H+VEEATW+RED+ + +YPE FEDE   R E CNAP++
Subjt:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRY

A0A5D3BXM1 DNA/RNA polymerases superfamily protein3.9e-1360Show/hide
Query:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRYSADGI
        LA++ KMLRN+ I LVKVLWRNH+VEEATW+RED+++ +YPE FE+E F R   CN P +   GI
Subjt:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRYSADGI

A0A6J1DWA8 uncharacterized protein LOC1110237172.0e-1772.46Show/hide
Query:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPE-----SFEDERFSRGEVCNAPRYSADG
        LAKETK+LRN+ IDLVK+LWRNHQVEEATWEREDEI+ +Y E     +F+DE F RGEVCNAPRYS  G
Subjt:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPE-----SFEDERFSRGEVCNAPRYSADG

A0A6J1DZD5 uncharacterized protein LOC1110244673.4e-1775.76Show/hide
Query:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPE-----SFEDERFSRGEVCNAPRYS
        LAKETK+LRN +IDLVKV WRNHQVEE TWEREDEIK +YPE     +FEDE F RGEVCNAP YS
Subjt:  LAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPE-----SFEDERFSRGEVCNAPRYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGACCCTTGCAAAAGAGACCAAGATGCTGAGAAACCAGACGATTGACTTGGTGAAGGTTCTATGGAGAAATCACCAAGTGGAGGAAGCTACCTGGGAAAGGGA
AGATGAGATCAAAGAAAAATATCCTGAGTCTTTCGAGGACGAACGTTTTTCAAGGGGGGAAGTCTGTAATGCCCCGCGTTACTCAGCAGATGGTATAAGAGGTGCCGAAT
CCTGGGCCTGGGGCATTACAGATGGTATCAGAGTGGAACCTCTCCCAGTCGTAGGAAAATGTCGGGGCAAAGAGCCGTGGGTCGAAAATTTTGAGAGGCATAAGGAGAGT
AATGTGAAGTTGCATTATTCACATATGGCGTTGGGTAAGAATATAGAGAGTATCGTAGTGTCCTTCCATATGGTTGTTGTTTCCATGAGTGTCAGTCTGCTCCTACCATT
TGCACCTCACCTTCTTTCTTCTTGGAATGACTTGCCTTCTTTGCAGCCGATAACTCCTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGACCCTTGCAAAAGAGACCAAGATGCTGAGAAACCAGACGATTGACTTGGTGAAGGTTCTATGGAGAAATCACCAAGTGGAGGAAGCTACCTGGGAAAGGGA
AGATGAGATCAAAGAAAAATATCCTGAGTCTTTCGAGGACGAACGTTTTTCAAGGGGGGAAGTCTGTAATGCCCCGCGTTACTCAGCAGATGGTATAAGAGGTGCCGAAT
CCTGGGCCTGGGGCATTACAGATGGTATCAGAGTGGAACCTCTCCCAGTCGTAGGAAAATGTCGGGGCAAAGAGCCGTGGGTCGAAAATTTTGAGAGGCATAAGGAGAGT
AATGTGAAGTTGCATTATTCACATATGGCGTTGGGTAAGAATATAGAGAGTATCGTAGTGTCCTTCCATATGGTTGTTGTTTCCATGAGTGTCAGTCTGCTCCTACCATT
TGCACCTCACCTTCTTTCTTCTTGGAATGACTTGCCTTCTTTGCAGCCGATAACTCCTCAGTAG
Protein sequenceShow/hide protein sequence
MSMTLAKETKMLRNQTIDLVKVLWRNHQVEEATWEREDEIKEKYPESFEDERFSRGEVCNAPRYSADGIRGAESWAWGITDGIRVEPLPVVGKCRGKEPWVENFERHKES
NVKLHYSHMALGKNIESIVVSFHMVVVSMSVSLLLPFAPHLLSSWNDLPSLQPITPQ