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Moc06g26560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g26560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr6:20031778..20032374
RNA-Seq ExpressionMoc06g26560
SyntenyMoc06g26560
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026069.1 gag/pol protein [Cucumis melo var. makuwa]4.2e-2461.48Show/hide
Query:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS
        +AEMNG+VIDE S VSFILESLP+ FLQF SN V+NKIAY   T+LN+LQ  +SLMK KGQ+G+ANVA S ++FH+GSTSGTK + SSS +K +KK K  
Subjt:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS

Query:  GKGPKADPTTVAAKKGKAKVAR
        G+G KA+  T    K KAK A+
Subjt:  GKGPKADPTTVAAKKGKAKVAR

KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]4.2e-2462.3Show/hide
Query:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS
        +AEMNG+VIDE S VSFILESLP+ FLQF SN V+NKIAY   TLLN+LQ  +SLMK KGQ+G+ANVA S ++FH+GSTSGTK + SSS SK +KK K  
Subjt:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS

Query:  GKGPKADPTTVAAKKGKAKVAR
        G+G KA+       K KAK A+
Subjt:  GKGPKADPTTVAAKKGKAKVAR

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]9.3e-2461.48Show/hide
Query:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS
        +AEMNG+VIDE S VSFILESLP+ FLQF SN V+NKIAY   TLLN+LQ  +SLMK KGQ+G+ANVA S ++FH+GSTSGTK + SSS +K +KK K  
Subjt:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS

Query:  GKGPKADPTTVAAKKGKAKVAR
        G+G KA+       K KAK A+
Subjt:  GKGPKADPTTVAAKKGKAKVAR

KAA0046844.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-2461.48Show/hide
Query:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS
        +AEMNG+VIDE + VSFILESL + FLQF SNVV+NKIAY   TLLN+LQ  +SLMK KGQ+G+ANVA S ++FH+GSTSGTK++ SSS +K +KK K  
Subjt:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS

Query:  GKGPKADPTTVAAKKGKAKVAR
        G+G KA+       K KAKVA+
Subjt:  GKGPKADPTTVAAKKGKAKVAR

KAA0066490.1 gag/pol protein [Cucumis melo var. makuwa]3.2e-2462.3Show/hide
Query:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS
        MAEMNG+VIDE S VSFILESLP+ FLQF SN V+NKIAY   TLLN+LQ  +SLMK KGQ+G+ANVA S ++FH+GSTSGTK + SSS +K +KK K  
Subjt:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS

Query:  GKGPKADPTTVAAKKGKAKVAR
        G+G KA+       K KAK A+
Subjt:  GKGPKADPTTVAAKKGKAKVAR

TrEMBL top hitse value%identityAlignment
A0A5A7SLD1 Gag/pol protein2.0e-2461.48Show/hide
Query:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS
        +AEMNG+VIDE S VSFILESLP+ FLQF SN V+NKIAY   T+LN+LQ  +SLMK KGQ+G+ANVA S ++FH+GSTSGTK + SSS +K +KK K  
Subjt:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS

Query:  GKGPKADPTTVAAKKGKAKVAR
        G+G KA+  T    K KAK A+
Subjt:  GKGPKADPTTVAAKKGKAKVAR

A0A5A7SMH8 Gag/pol protein4.5e-2461.48Show/hide
Query:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS
        +AEMNG+VIDE S VSFILESLP+ FLQF SN V+NKIAY   TLLN+LQ  +SLMK KGQ+G+ANVA S ++FH+GSTSGTK + SSS +K +KK K  
Subjt:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS

Query:  GKGPKADPTTVAAKKGKAKVAR
        G+G KA+       K KAK A+
Subjt:  GKGPKADPTTVAAKKGKAKVAR

A0A5A7SMN4 Gag/pol protein2.0e-2462.3Show/hide
Query:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS
        +AEMNG+VIDE S VSFILESLP+ FLQF SN V+NKIAY   TLLN+LQ  +SLMK KGQ+G+ANVA S ++FH+GSTSGTK + SSS SK +KK K  
Subjt:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS

Query:  GKGPKADPTTVAAKKGKAKVAR
        G+G KA+       K KAK A+
Subjt:  GKGPKADPTTVAAKKGKAKVAR

A0A5A7VH46 Gag/pol protein1.5e-2462.3Show/hide
Query:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS
        MAEMNG+VIDE S VSFILESLP+ FLQF SN V+NKIAY   TLLN+LQ  +SLMK KGQ+G+ANVA S ++FH+GSTSGTK + SSS +K +KK K  
Subjt:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS

Query:  GKGPKADPTTVAAKKGKAKVAR
        G+G KA+       K KAK A+
Subjt:  GKGPKADPTTVAAKKGKAKVAR

A0A5D3C269 Gag/pol protein3.4e-2461.48Show/hide
Query:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS
        +AEMNG+VIDE + VSFILESL + FLQF SNVV+NKIAY   TLLN+LQ  +SLMK KGQ+G+ANVA S ++FH+GSTSGTK++ SSS +K +KK K  
Subjt:  MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAIS-KQFHQGSTSGTKFLHSSSRSKTFKKNKNS

Query:  GKGPKADPTTVAAKKGKAKVAR
        G+G KA+       K KAKVA+
Subjt:  GKGPKADPTTVAAKKGKAKVAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAATGAACGGCTCTGTCATAGACGAGGGGAGCTCGGTTAGCTTTATCTTGGAATCTCTTCCAAAGGGTTTCCTACAGTTCTGCAGCAATGTTGTGATAAACAA
GATAGCGTACAACTTTGTCACGCTCTTAAATAAGCTACAAATTTCTCAGTCTCTTATGAAAAATAAAGGACAAGAAGGCGATGCAAATGTTGCTATCTCAAAACAGTTCC
ATCAAGGTTCGACCTCAGGAACCAAATTTTTGCATTCTTCATCAAGAAGTAAGACTTTCAAAAAGAATAAGAACAGTGGTAAGGGGCCTAAAGCTGACCCTACTACTGTT
GCGGCCAAGAAGGGCAAGGCGAAAGTTGCTAGGACAAAGGAAAATGTTTCCATTGCAATGTGGATGGGCACTAGAAAAGAAAATGCCCGAAATACTTGGCCGAAAAGAAG
AAAACCAAAGAAGGTAAATATGTTTTACTTGTTCTTGAAACTTGCTGAGTGGAGAATGATGATTCTGTCTGGATACTGGATTCAGAGGCCGCTAATCATGTTTGTTCTTT
TCTTCAGGGAATTTGTTCTTAGAAGCAGCTTGATGCTGGGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAATGAACGGCTCTGTCATAGACGAGGGGAGCTCGGTTAGCTTTATCTTGGAATCTCTTCCAAAGGGTTTCCTACAGTTCTGCAGCAATGTTGTGATAAACAA
GATAGCGTACAACTTTGTCACGCTCTTAAATAAGCTACAAATTTCTCAGTCTCTTATGAAAAATAAAGGACAAGAAGGCGATGCAAATGTTGCTATCTCAAAACAGTTCC
ATCAAGGTTCGACCTCAGGAACCAAATTTTTGCATTCTTCATCAAGAAGTAAGACTTTCAAAAAGAATAAGAACAGTGGTAAGGGGCCTAAAGCTGACCCTACTACTGTT
GCGGCCAAGAAGGGCAAGGCGAAAGTTGCTAGGACAAAGGAAAATGTTTCCATTGCAATGTGGATGGGCACTAGAAAAGAAAATGCCCGAAATACTTGGCCGAAAAGAAG
AAAACCAAAGAAGGTAAATATGTTTTACTTGTTCTTGAAACTTGCTGAGTGGAGAATGATGATTCTGTCTGGATACTGGATTCAGAGGCCGCTAATCATGTTTGTTCTTT
TCTTCAGGGAATTTGTTCTTAGAAGCAGCTTGATGCTGGGGAGATGA
Protein sequenceShow/hide protein sequence
MAEMNGSVIDEGSSVSFILESLPKGFLQFCSNVVINKIAYNFVTLLNKLQISQSLMKNKGQEGDANVAISKQFHQGSTSGTKFLHSSSRSKTFKKNKNSGKGPKADPTTV
AAKKGKAKVARTKENVSIAMWMGTRKENARNTWPKRRKPKKVNMFYLFLKLAEWRMMILSGYWIQRPLIMFVLFFREFVLRSSLMLGR