; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g26760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g26760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:20170335..20174388
RNA-Seq ExpressionMoc06g26760
SyntenyMoc06g26760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038045.1 uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa]7.9e-1634.38Show/hide
Query:  GGCFNAVERRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVER---------------------------------------SNSVETYYMEM
        G  +  ++RR  +     +  + +IK K+  F+G+T+ EEY+QWE++VE                                        + SVE YY EM
Subjt:  GGCFNAVERRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVER---------------------------------------SNSVETYYMEM

Query:  KMLLDELDLYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKSTR
          L+D LDL E+ E  MA+FL GL KEIV+++DLQ Y D+E M+H+AI++EK    + TR
Subjt:  KMLLDELDLYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKSTR

KAG2411297.1 hypothetical protein I3760_Q013700, partial [Carya illinoinensis]3.0e-1536.36Show/hide
Query:  RRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE------------------------------------------RSNSVETYYMEMKMLLD
        RRN RG   VD  L SIK K+P F GRT+ E YL+WE+++E                                           S SVE Y+ EM++ + 
Subjt:  RRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE------------------------------------------RSNSVETYYMEMKMLLD

Query:  ELDLYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKST
          ++ ED E TMARFL GL +EI   ++LQ+Y ++E MVH+A+++E+ L+RK T
Subjt:  ELDLYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKST

RDX74587.1 hypothetical protein CR513_45643, partial [Mucuna pruriens]1.8e-1537.75Show/hide
Query:  PKQKRSNNSLHHKEYWEVEGREY-GGCFNAVERRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVER-------SNSVETYYMEMKMLLDELD
        PK   +  ++ +   +E E  EY  G  N  ER+  +G    D+   +IK  +P F G+ + E YL+WE +VE        S   + YY EM++++  ++
Subjt:  PKQKRSNNSLHHKEYWEVEGREY-GGCFNAVERRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVER-------SNSVETYYMEMKMLLDELD

Query:  LYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKST
        + ED EVTMARF+RGLKKEI   ++LQ Y ++E ++H AIQ+E+ L+ KS+
Subjt:  LYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKST

XP_022159097.1 uncharacterized protein LOC111025539 [Momordica charantia]5.5e-1735.15Show/hide
Query:  VEGREYGGCFNAVERRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVER--------------------------------------SNSVET
        V GR   G F    ++  R  ++VD   G+IK K P F+G +NSE+YL+WE++ E                                       + SVE 
Subjt:  VEGREYGGCFNAVERRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVER--------------------------------------SNSVET

Query:  YYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKSTR
        YY +M+ L++ +D+ E+EE TMARF+ GL  E+  R+DLQ YED+E +VH +++IEK +QR+ +R
Subjt:  YYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKSTR

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]1.2e-1628.92Show/hide
Query:  SQQENFTKFFHNMEHLTEKLQRLDSRLKSIER--QPTYPKQK-RSNNSLHHKE------YWEVEGREYGGCFNAVERRNLRGVHNVDHTLGSIKPKLPMF
        +QQ    +    +E LT+++ RL+ + ++ +R  QPT        +NS HH++      +  + GR++G  ++ +++R +     +D  +GSIK KLP F
Subjt:  SQQENFTKFFHNMEHLTEKLQRLDSRLKSIER--QPTYPKQK-RSNNSLHHKE------YWEVEGREYGGCFNAVERRNLRGVHNVDHTLGSIKPKLPMF

Query:  YGRTNSEEYLQWERQVE------------------------------------RSN----------------------------------------SVET
        YG+T+ EEYLQWE+ VE                                    R N                                        SVE 
Subjt:  YGRTNSEEYLQWERQVE------------------------------------RSN----------------------------------------SVET

Query:  YYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKSTRQLDCNELFDCNTSTIVTPTPQEAYDVVCELGKKAH
        YY EM  L+D LDL ED E  MARFL GL  EI ++ DLQ Y ++E ++HIAI+IE+ +QR+S R    ++ F  +TST              +   K  
Subjt:  YYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKSTRQLDCNELFDCNTSTIVTPTPQEAYDVVCELGKKAH

Query:  EVKTKACELFEKESCVRQKHEISLWPKEENER
        + K +  E+ EK     +K E S   KE+ E+
Subjt:  EVKTKACELFEKESCVRQKHEISLWPKEENER

TrEMBL top hitse value%identityAlignment
A0A2N9EHJ5 Reverse transcriptase domain-containing protein3.5e-1740.31Show/hide
Query:  RRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE-----------------RSNSVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVE
        + N  G   +D  LGSIK K+P F GRTN E YL+WE++++                  S SVE Y+ EM++ +   ++ ED E TMARFL GL ++I  
Subjt:  RRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE-----------------RSNSVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVE

Query:  RLDLQFYEDLEGMVHIAIQIEKHLQRKST
         ++LQ Y ++E MVH+A+++E+ L+RK T
Subjt:  RLDLQFYEDLEGMVHIAIQIEKHLQRKST

A0A2N9FCF4 CCHC-type domain-containing protein4.5e-1741.73Show/hide
Query:  NLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE-----------------RSNSVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERL
        N  G   VD +LGSIK K+P F GRT+ E YL+WE++++                  S SVE Y+ EM++ +   ++ ED E TMARFL GL ++I   +
Subjt:  NLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE-----------------RSNSVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERL

Query:  DLQFYEDLEGMVHIAIQIEKHLQRKST
        +LQ Y ++E MVH+AI++E+ L+RK T
Subjt:  DLQFYEDLEGMVHIAIQIEKHLQRKST

A0A2N9GVB1 Uncharacterized protein4.5e-1740.94Show/hide
Query:  NLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE-----------------RSNSVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERL
        NL G   VD  LGSIK K+P F GRT+ E YL+WE++++                  S SVE Y+ EM++ +   ++ ED E TMARFL GL ++I   +
Subjt:  NLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE-----------------RSNSVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERL

Query:  DLQFYEDLEGMVHIAIQIEKHLQRKST
        +LQ Y ++E M+H+A+++E+ L+RK T
Subjt:  DLQFYEDLEGMVHIAIQIEKHLQRKST

A0A2N9H490 Uncharacterized protein2.0e-1741.73Show/hide
Query:  NLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE-----------------RSNSVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERL
        NL G   VD  LGSIK K+P F GRT+ E YL+WE++++                  S SVE Y+ EM++ +   ++ ED E TMARFL GL ++I   +
Subjt:  NLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE-----------------RSNSVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERL

Query:  DLQFYEDLEGMVHIAIQIEKHLQRKST
        +LQ Y ++E MVH+A+++E+ L+RK T
Subjt:  DLQFYEDLEGMVHIAIQIEKHLQRKST

A0A2N9I5D4 Xyloglucan:xyloglucosyl transferase2.0e-1741.73Show/hide
Query:  NLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE-----------------RSNSVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERL
        NL G   VD  LGSIK K+P F GRT+ E YL+WE++++                  S SVE Y+ EM++ +   ++ ED E TMARFL GL ++I   +
Subjt:  NLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVE-----------------RSNSVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERL

Query:  DLQFYEDLEGMVHIAIQIEKHLQRKST
        +LQ Y ++E MVH+A+++E+ L+RK T
Subjt:  DLQFYEDLEGMVHIAIQIEKHLQRKST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCGCCAGATCTGGCTCGTGGAGGCAGCACCGCCGTGGGTTATCTTGGAGCGTAGCGGGAGCTCGCCGCTGCCCCTAATCATTGAAGAAAACGCCGCCGCTGCAGA
ACAACCAATACCGTTGACCTTTGCCTACCAAAGCCGAAGGAGTGCCACCACGGGCCGGTGCTTCTCGAGATCCCGTCGATCTCTTCGGGCGTCACCGTCGATGAAGAGCT
ACCCGAGGTCGACCTTCGTTGGTAGACGTCACCGCCTCTTGCTCATCGGCTTACTTTTCAATATTGGAGTGTACTTTGCTGAGAGGGTGAGATTGAGCGTTTCCATGTCT
CAACAAGAGAATTTTACAAAGTTTTTCCACAACATGGAGCATTTGACGGAGAAGCTCCAAAGGTTGGATTCGAGACTCAAATCTATTGAAAGACAACCAACCTATCCAAA
GCAAAAGAGGAGTAATAATTCACTACACCACAAGGAGTATTGGGAGGTCGAAGGAAGGGAATATGGTGGATGTTTCAATGCTGTCGAAAGGAGAAATCTAAGAGGAGTTC
ATAATGTTGATCATACCTTGGGAAGCATCAAGCCTAAACTTCCTATGTTCTATGGTAGGACAAACTCGGAGGAATACCTTCAATGGGAAAGGCAAGTTGAACGTAGCAAT
AGCGTGGAGACTTACTACATGGAGATGAAAATGTTGCTTGATGAGCTTGATCTTTATGAGGATGAGGAAGTTACAATGGCTCGTTTCTTAAGAGGACTTAAGAAGGAGAT
TGTCGAACGACTAGATCTTCAATTTTATGAGGATTTAGAAGGGATGGTGCATATAGCCATACAAATTGAGAAACATCTCCAAAGGAAGTCTACAAGGCAACTAGATTGCA
ATGAATTGTTTGATTGTAACACTTCTACGATTGTAACACCTACACCTCAAGAAGCATATGATGTTGTGTGTGAGTTAGGGAAAAAGGCGCATGAGGTCAAGACAAAAGCA
TGTGAATTGTTTGAAAAAGAATCTTGTGTGAGACAAAAGCATGAGATTAGTCTATGGCCTAAAGAGGAAAATGAGAGAAAAGCCAAGAATGAGGCTAGAACACTCATTGA
GAAGATTGAACCAAAGATTGCTTCCATAGTACACCATGGCAGTCAACATGTGGTTTACAAGGCTGAAGCATCTCGTGAGAAATCTTATTGGAAGGATCAATTTTCTAATG
GAAAGAAGTGGAAGAGGAACCCATGTAGAGATATACATTTGACTTTTGATGATTTTAAGAGTGCTCTACACGGCGAGTTTGATGAAGATTACATATTCAATGCTGCTGAT
TTCCGTCCATTTGATGTAGGAGATCCTTTTGATTCGAGGACGAATTCTTTTGAAGAAGGGGAGGATGATATGAACCAAAGTATCTTAGTGCTCAAGGATTTAAAGGAAGA
TGTTGGAGAATCCTATGTCCAAGTTGACAACAAATCGGACTTGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGCGCCAGATCTGGCTCGTGGAGGCAGCACCGCCGTGGGTTATCTTGGAGCGTAGCGGGAGCTCGCCGCTGCCCCTAATCATTGAAGAAAACGCCGCCGCTGCAGA
ACAACCAATACCGTTGACCTTTGCCTACCAAAGCCGAAGGAGTGCCACCACGGGCCGGTGCTTCTCGAGATCCCGTCGATCTCTTCGGGCGTCACCGTCGATGAAGAGCT
ACCCGAGGTCGACCTTCGTTGGTAGACGTCACCGCCTCTTGCTCATCGGCTTACTTTTCAATATTGGAGTGTACTTTGCTGAGAGGGTGAGATTGAGCGTTTCCATGTCT
CAACAAGAGAATTTTACAAAGTTTTTCCACAACATGGAGCATTTGACGGAGAAGCTCCAAAGGTTGGATTCGAGACTCAAATCTATTGAAAGACAACCAACCTATCCAAA
GCAAAAGAGGAGTAATAATTCACTACACCACAAGGAGTATTGGGAGGTCGAAGGAAGGGAATATGGTGGATGTTTCAATGCTGTCGAAAGGAGAAATCTAAGAGGAGTTC
ATAATGTTGATCATACCTTGGGAAGCATCAAGCCTAAACTTCCTATGTTCTATGGTAGGACAAACTCGGAGGAATACCTTCAATGGGAAAGGCAAGTTGAACGTAGCAAT
AGCGTGGAGACTTACTACATGGAGATGAAAATGTTGCTTGATGAGCTTGATCTTTATGAGGATGAGGAAGTTACAATGGCTCGTTTCTTAAGAGGACTTAAGAAGGAGAT
TGTCGAACGACTAGATCTTCAATTTTATGAGGATTTAGAAGGGATGGTGCATATAGCCATACAAATTGAGAAACATCTCCAAAGGAAGTCTACAAGGCAACTAGATTGCA
ATGAATTGTTTGATTGTAACACTTCTACGATTGTAACACCTACACCTCAAGAAGCATATGATGTTGTGTGTGAGTTAGGGAAAAAGGCGCATGAGGTCAAGACAAAAGCA
TGTGAATTGTTTGAAAAAGAATCTTGTGTGAGACAAAAGCATGAGATTAGTCTATGGCCTAAAGAGGAAAATGAGAGAAAAGCCAAGAATGAGGCTAGAACACTCATTGA
GAAGATTGAACCAAAGATTGCTTCCATAGTACACCATGGCAGTCAACATGTGGTTTACAAGGCTGAAGCATCTCGTGAGAAATCTTATTGGAAGGATCAATTTTCTAATG
GAAAGAAGTGGAAGAGGAACCCATGTAGAGATATACATTTGACTTTTGATGATTTTAAGAGTGCTCTACACGGCGAGTTTGATGAAGATTACATATTCAATGCTGCTGAT
TTCCGTCCATTTGATGTAGGAGATCCTTTTGATTCGAGGACGAATTCTTTTGAAGAAGGGGAGGATGATATGAACCAAAGTATCTTAGTGCTCAAGGATTTAAAGGAAGA
TGTTGGAGAATCCTATGTCCAAGTTGACAACAAATCGGACTTGCATTAA
Protein sequenceShow/hide protein sequence
MTRQIWLVEAAPPWVILERSGSSPLPLIIEENAAAAEQPIPLTFAYQSRRSATTGRCFSRSRRSLRASPSMKSYPRSTFVGRRHRLLLIGLLFNIGVYFAERVRLSVSMS
QQENFTKFFHNMEHLTEKLQRLDSRLKSIERQPTYPKQKRSNNSLHHKEYWEVEGREYGGCFNAVERRNLRGVHNVDHTLGSIKPKLPMFYGRTNSEEYLQWERQVERSN
SVETYYMEMKMLLDELDLYEDEEVTMARFLRGLKKEIVERLDLQFYEDLEGMVHIAIQIEKHLQRKSTRQLDCNELFDCNTSTIVTPTPQEAYDVVCELGKKAHEVKTKA
CELFEKESCVRQKHEISLWPKEENERKAKNEARTLIEKIEPKIASIVHHGSQHVVYKAEASREKSYWKDQFSNGKKWKRNPCRDIHLTFDDFKSALHGEFDEDYIFNAAD
FRPFDVGDPFDSRTNSFEEGEDDMNQSILVLKDLKEDVGESYVQVDNKSDLH