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Moc06g26800 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g26800
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr6:20220048..20220524
RNA-Seq ExpressionMoc06g26800
SyntenyMoc06g26800
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155000.1 uncharacterized protein LOC111022144 [Momordica charantia]8.0e-7187.9Show/hide
Query:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
        MLRGEALNWWDS+AA EDHANV IPWARFK+LLYDYYY ETVKDMKEAEFLHLVQGTLSVA YERKFTELSRFALELI   A+KIKRFVKGL KGIRGPV
Subjt:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV

Query:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQRQ
        DLQRP +YAEAVRGALIMDKDVSNKA  LPEVGSSSGVKRKF  TYADP LRAPQ Q
Subjt:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQRQ

XP_022155872.1 uncharacterized protein LOC111022885 [Momordica charantia]1.7e-6885.26Show/hide
Query:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
        MLR EALNWWDSVAA EDHANVP+ WARFK+LLYDYYYPETVKDMKEAEFLHL QGTL+VA YERKFTELSRFA ELIPTEA+KIKRFVKGLRK IRGPV
Subjt:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV

Query:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR
        DLQRP TYAEAVRGALIMDKDVSN+  PL EVGSSSGVKRK    YAD   RAPQR
Subjt:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]1.9e-8096.82Show/hide
Query:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
        MLRGEALNWWDSVAA ED+ANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVA YERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
Subjt:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV

Query:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQRQ
        DLQRPTTYAEAVRGAL+MDKDVSNKASPLPEVGSSSGVKRKFPSTYAD VLRAPQRQ
Subjt:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQRQ

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]3.7e-6883.97Show/hide
Query:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
        MLR EALNWWDSVAA EDHANVP+PWARFKNLLYD+YY ETV+DMKE EFLHLVQGTL+VA YERKFTELS FALELIPTEA+KIKRFVKGL KGIRG V
Subjt:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV

Query:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR
        DLQRP TYAEAVRG LIMDKDVSN+  PL EVGSS GVKRK P TYAD   RAPQR
Subjt:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR

XP_022159077.1 uncharacterized protein LOC111025517 [Momordica charantia]6.0e-6682.05Show/hide
Query:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
        MLRGEALNWWDSVA  EDHANVPI WARFK+LLYDYYYP+T+KDMKEAEFLH   GTL+VA YERKFTELS FA ELIPTEA+KIKRFVKGLRKGIRGPV
Subjt:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV

Query:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR
        DLQRP TYAEAVRG LIMD DVSN   PL EVGSSSGVKRK    YAD   RAPQR
Subjt:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR

TrEMBL top hitse value%identityAlignment
A0A6J1DL73 uncharacterized protein LOC1110221443.9e-7187.9Show/hide
Query:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
        MLRGEALNWWDS+AA EDHANV IPWARFK+LLYDYYY ETVKDMKEAEFLHLVQGTLSVA YERKFTELSRFALELI   A+KIKRFVKGL KGIRGPV
Subjt:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV

Query:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQRQ
        DLQRP +YAEAVRGALIMDKDVSNKA  LPEVGSSSGVKRKF  TYADP LRAPQ Q
Subjt:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQRQ

A0A6J1DQJ4 uncharacterized protein LOC1110228858.1e-6985.26Show/hide
Query:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
        MLR EALNWWDSVAA EDHANVP+ WARFK+LLYDYYYPETVKDMKEAEFLHL QGTL+VA YERKFTELSRFA ELIPTEA+KIKRFVKGLRK IRGPV
Subjt:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV

Query:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR
        DLQRP TYAEAVRGALIMDKDVSN+  PL EVGSSSGVKRK    YAD   RAPQR
Subjt:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR

A0A6J1DUM2 uncharacterized protein LOC1110232479.3e-8196.82Show/hide
Query:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
        MLRGEALNWWDSVAA ED+ANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVA YERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
Subjt:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV

Query:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQRQ
        DLQRPTTYAEAVRGAL+MDKDVSNKASPLPEVGSSSGVKRKFPSTYAD VLRAPQRQ
Subjt:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQRQ

A0A6J1DVA0 uncharacterized protein LOC1110234241.8e-6883.97Show/hide
Query:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
        MLR EALNWWDSVAA EDHANVP+PWARFKNLLYD+YY ETV+DMKE EFLHLVQGTL+VA YERKFTELS FALELIPTEA+KIKRFVKGL KGIRG V
Subjt:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV

Query:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR
        DLQRP TYAEAVRG LIMDKDVSN+  PL EVGSS GVKRK P TYAD   RAPQR
Subjt:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR

A0A6J1DYU5 uncharacterized protein LOC1110255172.9e-6682.05Show/hide
Query:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV
        MLRGEALNWWDSVA  EDHANVPI WARFK+LLYDYYYP+T+KDMKEAEFLH   GTL+VA YERKFTELS FA ELIPTEA+KIKRFVKGLRKGIRGPV
Subjt:  MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPV

Query:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR
        DLQRP TYAEAVRG LIMD DVSN   PL EVGSSSGVKRK    YAD   RAPQR
Subjt:  DLQRPTTYAEAVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGGGCGAGGCCCTGAACTGGTGGGACTCAGTAGCAGCGGTAGAGGATCATGCGAATGTACCAATTCCGTGGGCAAGGTTCAAGAACTTGTTGTACGACTACTA
CTATCCGGAGACTGTGAAAGACATGAAGGAGGCAGAATTCCTGCATCTAGTCCAAGGAACTTTATCGGTGGCACATTATGAAAGGAAGTTCACGGAACTCTCCCGTTTCG
CTCTAGAGTTAATTCCCACTGAGGCTTTAAAGATCAAGAGGTTTGTTAAAGGCTTGCGCAAGGGAATCAGAGGCCCGGTGGACCTCCAGCGACCCACCACCTATGCTGAA
GCGGTTAGGGGCGCCTTGATTATGGATAAGGATGTTTCCAACAAGGCCTCACCCCTGCCAGAGGTCGGATCATCTTCAGGTGTGAAAAGGAAGTTTCCTTCGACTTATGC
CGACCCGGTATTGAGAGCACCCCAGCGCCAGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGGGCGAGGCCCTGAACTGGTGGGACTCAGTAGCAGCGGTAGAGGATCATGCGAATGTACCAATTCCGTGGGCAAGGTTCAAGAACTTGTTGTACGACTACTA
CTATCCGGAGACTGTGAAAGACATGAAGGAGGCAGAATTCCTGCATCTAGTCCAAGGAACTTTATCGGTGGCACATTATGAAAGGAAGTTCACGGAACTCTCCCGTTTCG
CTCTAGAGTTAATTCCCACTGAGGCTTTAAAGATCAAGAGGTTTGTTAAAGGCTTGCGCAAGGGAATCAGAGGCCCGGTGGACCTCCAGCGACCCACCACCTATGCTGAA
GCGGTTAGGGGCGCCTTGATTATGGATAAGGATGTTTCCAACAAGGCCTCACCCCTGCCAGAGGTCGGATCATCTTCAGGTGTGAAAAGGAAGTTTCCTTCGACTTATGC
CGACCCGGTATTGAGAGCACCCCAGCGCCAGACTTAA
Protein sequenceShow/hide protein sequence
MLRGEALNWWDSVAAVEDHANVPIPWARFKNLLYDYYYPETVKDMKEAEFLHLVQGTLSVAHYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPVDLQRPTTYAE
AVRGALIMDKDVSNKASPLPEVGSSSGVKRKFPSTYADPVLRAPQRQT