; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g26870 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g26870
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionzf-RVT domain-containing protein
Genome locationchr6:20279483..20280991
RNA-Seq ExpressionMoc06g26870
SyntenyMoc06g26870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4346094.1 hypothetical protein G4B88_009149 [Cannabis sativa]4.6e-0446.67Show/hide
Query:  SYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFI
        SY+WKS++W R+LL   LR  VG   TI +F DP LPR  SF+  S   +H N LV + +
Subjt:  SYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFI

KAF4394802.1 hypothetical protein F8388_015708 [Cannabis sativa]2.1e-0440Show/hide
Query:  SYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFIHKGFRTFNFSPLFSILRILI
        SY+WKS++W R+LL   LR  VG   TI +F DP LPR  SF+  S   +H N LV   + +    +N   L  I  +L+
Subjt:  SYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFIHKGFRTFNFSPLFSILRILI

PKA49974.1 Putative ribonuclease H protein [Apostasia shenzhenica]3.8e-0647.54Show/hide
Query:  LEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHL
        L A    NSSY+W+S+LW RDLL   LR  +GN  ++++F DP LPR  SFQ ++ P+ +L
Subjt:  LEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHL

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]7.6e-0742.25Show/hide
Query:  MLEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFIH
        +L+A+ + N SY WK  +W RDLL   LR+ VGN +TI +FSDP +PR  SF+ ++ P    +  V++ I+
Subjt:  MLEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFIH

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.5e-0748.57Show/hide
Query:  MLEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFI
        +L+AS+ + SSY WK  LW RDLL   LR  VGN +TI+ FSDP LPR  +F+ L   +  L+  V++FI
Subjt:  MLEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFI

TrEMBL top hitse value%identityAlignment
A0A2I0A354 Ribonuclease H protein1.8e-0647.54Show/hide
Query:  LEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHL
        L A    NSSY+W+S+LW RDLL   LR  +GN  ++++F DP LPR  SFQ ++ P+ +L
Subjt:  LEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHL

A0A6J1BRN0 uncharacterized protein LOC1110047873.7e-0742.25Show/hide
Query:  MLEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFIH
        +L+A+ + N SY WK  +W RDLL   LR+ VGN +TI +FSDP +PR  SF+ ++ P    +  V++ I+
Subjt:  MLEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFIH

A0A6J1DX30 uncharacterized protein LOC1110248742.2e-0748.57Show/hide
Query:  MLEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFI
        +L+AS+ + SSY WK  LW RDLL   LR  VGN +TI+ FSDP LPR  +F+ L   +  L+  V++FI
Subjt:  MLEASDITNSSYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFI

A0A7J6HHP4 Uncharacterized protein1.0e-0440Show/hide
Query:  SYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFIHKGFRTFNFSPLFSILRILI
        SY+WKS++W R+LL   LR  VG   TI +F DP LPR  SF+  S   +H N LV   + +    +N   L  I  +L+
Subjt:  SYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFIHKGFRTFNFSPLFSILRILI

A0A7J6HJW0 zf-RVT domain-containing protein2.2e-0446.67Show/hide
Query:  SYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFI
        SY+WKS++W R+LL   LR  VG   TI +F DP LPR  SF+  S   +H N LV + +
Subjt:  SYLWKSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGGGATAAAATATCCAATGGCCACGTGGAGGACAGAGATTGGCAGTCCGAGGAGATTGTTTTCAAGAGTCGTTTTGCAAAGCTCATCCTTGGAACCTTCCGAGG
AGGGAAGCTCATTACTTCTAATCATATTACCTCTAAAATATCCGAGCTCGACCCACTAGAACCCGACATATCCGACCTCAAAACTGACCAAGATGTTTCAGACCCTAGAC
TTCCTAGGAAGCAATCCTTTCAGCATCTATCACAGCCATCTACCACAGATGGAAATGGCTTAAGGAAAATGCTTGAAGCCAGCGATATTACTAATTCTTCCTACTTATGG
AAAAGTTTGTTGTGGGATCGTGATCTTCTAACCTATGTCTTAAGGAATGGAGTTGGAAATGACGCTACCATTCAGATGTTTTCAGACCCTAGGCTTCCTAGGAAGCAATC
CTTTCAGCATTTATCACAGCCATCTACACATTTGAATCCCTTGGTCTCAAACTTCATCCATAAGGGGTTCAGAACATTCAACTTCTCTCCTCTGTTCTCTATCCTGAGGA
TATTGATTCGATCCTCAAAATACCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGGGATAAAATATCCAATGGCCACGTGGAGGACAGAGATTGGCAGTCCGAGGAGATTGTTTTCAAGAGTCGTTTTGCAAAGCTCATCCTTGGAACCTTCCGAGG
AGGGAAGCTCATTACTTCTAATCATATTACCTCTAAAATATCCGAGCTCGACCCACTAGAACCCGACATATCCGACCTCAAAACTGACCAAGATGTTTCAGACCCTAGAC
TTCCTAGGAAGCAATCCTTTCAGCATCTATCACAGCCATCTACCACAGATGGAAATGGCTTAAGGAAAATGCTTGAAGCCAGCGATATTACTAATTCTTCCTACTTATGG
AAAAGTTTGTTGTGGGATCGTGATCTTCTAACCTATGTCTTAAGGAATGGAGTTGGAAATGACGCTACCATTCAGATGTTTTCAGACCCTAGGCTTCCTAGGAAGCAATC
CTTTCAGCATTTATCACAGCCATCTACACATTTGAATCCCTTGGTCTCAAACTTCATCCATAAGGGGTTCAGAACATTCAACTTCTCTCCTCTGTTCTCTATCCTGAGGA
TATTGATTCGATCCTCAAAATACCACTAA
Protein sequenceShow/hide protein sequence
MFGDKISNGHVEDRDWQSEEIVFKSRFAKLILGTFRGGKLITSNHITSKISELDPLEPDISDLKTDQDVSDPRLPRKQSFQHLSQPSTTDGNGLRKMLEASDITNSSYLW
KSLLWDRDLLTYVLRNGVGNDATIQMFSDPRLPRKQSFQHLSQPSTHLNPLVSNFIHKGFRTFNFSPLFSILRILIRSSKYH