CuGenDBv2

Gene ID	Moc06g27430
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrotrans_gag domain-containing protein
Genome location	chr6:20651908..20652468
RNA-Seq Expression	Moc06g27430
Synteny	Moc06g27430
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022145831.1 uncharacterized protein LOC111015193 [Momordica charantia]

6.4e-67

83.97

Show/hide

Query:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI
        MMLNTVANG  T KTYNEIVTILDQLTEHNDLW SERSR QPKTIDQ GVFNLDAMSSMQSQLDTLTQMMKN QG N APTPAST+NT LA VYHM ESI
Subjt:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI

Query:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSS
        CYYCGDSHNSENC S PASLCY+ +GNQ NF+PYSNTYNPGWRHHPNF   G G S
Subjt:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSS

XP_022153526.1 uncharacterized protein LOC111021009 [Momordica charantia]

4.5e-97

95.11

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Query:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI
        MMLNT ANG FTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQ GVFNLDAMSSMQSQLDT+TQMM N QGNNAAPTPASTSNTNLAPVYHMTESI
Subjt:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI

Query:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYKTYNPPGVPALPSPPQQ
        CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQV+NQQYKTYNPP VPALPSPP+Q
Subjt:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYKTYNPPGVPALPSPPQQ

XP_022157400.1 uncharacterized protein LOC111024107 [Momordica charantia]

6.0e-57

65.03

Show/hide

Query:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI
        MMLN  ANG FTSK++NEIV ILDQL+EHND W SERSRTQ K  D  GV  LD M+SMQ Q+DT+TQM+KN + NNAA   A  + TN +PVY + ES 
Subjt:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI

Query:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYK-TYNPPGVPALPSPP
        CYYCGD H SENCPS P+S+ YVGQ NQ+ F+PYSNTY+PGW+ HPNFSWSGQGSS++ GQ  NQQYK  Y PPG P  P+ P
Subjt:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYK-TYNPPGVPALPSPP

XP_022157836.1 uncharacterized protein LOC111024449 [Momordica charantia]

7.8e-65

73.91

Show/hide

Query:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI
        MMLNT ANG FTSKTYNEI+TILDQLTEHN LWCSERSRTQPKTID+ GVFNLDAMSSMQSQLDTL QMMKN QGNN APTP ST NTNLAPVYHM ESI
Subjt:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI

Query:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYKTYNPPGVPALPSPPQQ
        CYYCGDSHNSENCPS P  LCYV                            GQGSSNNAGQV+NQQYKTYN PGV  LP PPQQ
Subjt:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYKTYNPPGVPALPSPPQQ

XP_022159235.1 uncharacterized protein LOC111025653 [Momordica charantia]

1.7e-56

64.48

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Query:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI
        MMLN  ANG FTSK++NEIV ILDQL+EHN  WCSE+SRTQ K  D  GV  LD M+SMQ Q+DT+TQM+KN + NNA    A  + TN +PVY + ES 
Subjt:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI

Query:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYK-TYNPPGVPALPSPP
        CYYCGD H SENCPS P+S+ YVGQ NQ+ F+PYSNTYNPGW+ HPNFSWSGQGSSN  G   NQQYK  Y PPG P  P+ P
Subjt:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYK-TYNPPGVPALPSPP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CXK1 uncharacterized protein LOC111015193

3.1e-67

83.97

Show/hide

Query:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI
        MMLNTVANG  T KTYNEIVTILDQLTEHNDLW SERSR QPKTIDQ GVFNLDAMSSMQSQLDTLTQMMKN QG N APTPAST+NT LA VYHM ESI
Subjt:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI

Query:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSS
        CYYCGDSHNSENC S PASLCY+ +GNQ NF+PYSNTYNPGWRHHPNF   G G S
Subjt:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSS

A0A6J1DKX0 uncharacterized protein LOC111021009

1.7e-97

95.65

Show/hide

Query:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI
        MMLNT ANG FTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQ GVFNLDAMSSMQSQLDTLTQMM N QGNNAAPTPASTSNTNLAPVYHMTESI
Subjt:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI

Query:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYKTYNPPGVPALPSPPQQ
        CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQV+NQQYKTYNPP VPALPSPP+Q
Subjt:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYKTYNPPGVPALPSPPQQ

A0A6J1DSZ5 uncharacterized protein LOC111024107

2.9e-57

65.03

Show/hide

Query:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI
        MMLN  ANG FTSK++NEIV ILDQL+EHND W SERSRTQ K  D  GV  LD M+SMQ Q+DT+TQM+KN + NNAA   A  + TN +PVY + ES 
Subjt:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI

Query:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYK-TYNPPGVPALPSPP
        CYYCGD H SENCPS P+S+ YVGQ NQ+ F+PYSNTY+PGW+ HPNFSWSGQGSS++ GQ  NQQYK  Y PPG P  P+ P
Subjt:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYK-TYNPPGVPALPSPP

A0A6J1DY39 uncharacterized protein LOC111025653

8.4e-57

64.48

Show/hide

Query:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI
        MMLN  ANG FTSK++NEIV ILDQL+EHN  WCSE+SRTQ K  D  GV  LD M+SMQ Q+DT+TQM+KN + NNA    A  + TN +PVY + ES 
Subjt:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI

Query:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYK-TYNPPGVPALPSPP
        CYYCGD H SENCPS P+S+ YVGQ NQ+ F+PYSNTYNPGW+ HPNFSWSGQGSSN  G   NQQYK  Y PPG P  P+ P
Subjt:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYK-TYNPPGVPALPSPP

A0A6J1DZC3 uncharacterized protein LOC111024449

3.8e-65

73.91

Show/hide

Query:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI
        MMLNT ANG FTSKTYNEI+TILDQLTEHN LWCSERSRTQPKTID+ GVFNLDAMSSMQSQLDTL QMMKN QGNN APTP ST NTNLAPVYHM ESI
Subjt:  MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESI

Query:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYKTYNPPGVPALPSPPQQ
        CYYCGDSHNSENCPS P  LCYV                            GQGSSNNAGQV+NQQYKTYN PGV  LP PPQQ
Subjt:  CYYCGDSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYKTYNPPGVPALPSPPQQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGATGTTAAACACAGTCGCAAATGGAATGTTCACTTCTAAGACATATAACGAGATCGTCACCATTCTTGATCAGTTAACTGAACATAACGATCTATGGTGCTCA
GAGAGATCAAGGACTCAACCAAAGACCATAGATCAAACAGGAGTGTTTAATCTTGACGCGATGTCATCAATGCAGAGTCAATTAGATACCCTTACGCAAATGATG
AAGAATACGCAAGGGAATAATGCCGCACCTACACCAGCATCTACATCAAATACTAATCTTGCTCCTGTTTATCATATGACTGAATCTATTTGCTATTATTGTGGA
GATTCTCATAATTCTGAAAATTGTCCATCGATTCCAGCTTCTTTATGTTATGTAGGGCAAGGGAATCAAAGGAACTTTAGTCCTTACTCCAACACCTACAACCCG
GGATGGAGGCACCATCCTAATTTTTCATGGAGTGGGCAAGGGAGTTCCAACAATGCAGGTCAAGTTGAAAACCAACAATATAAGACTTATAACCCTCCGGGAGTC
CCTGCTTTACCTTCACCTCCACAGCAATTGATATGA

mRNA sequence

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Protein sequence

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MMLNTVANGMFTSKTYNEIVTILDQLTEHNDLWCSERSRTQPKTIDQTGVFNLDAMSSMQSQLDTLTQMMKNTQGNNAAPTPASTSNTNLAPVYHMTESICYYCG
DSHNSENCPSIPASLCYVGQGNQRNFSPYSNTYNPGWRHHPNFSWSGQGSSNNAGQVENQQYKTYNPPGVPALPSPPQQLI

Moc06g27430 (gene) of Bitter gourd (OHB3-1) v2 genome