; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g27490 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g27490
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr6:20676760..20677083
RNA-Seq ExpressionMoc06g27490
SyntenyMoc06g27490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032914.1 gag/pol protein [Cucumis melo var. makuwa]5.2e-2962.73Show/hide
Query:  MRDHKPRSKVVLNEISDEATN---TSTRVVDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVMDL
        +RDH+PRSK+VLNEIS  ATN   +ST+VVD    S  +HPSQEL+ PRRS R++ QPDRY+  +E QV+IP DG+ED  TYK+ M D+D+D+WIK MDL
Subjt:  MRDHKPRSKVVLNEISDEATN---TSTRVVDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVMDL

Query:  EMESMYFNSV
        EMESM+FNSV
Subjt:  EMESMYFNSV

KAA0048178.1 gag/pol protein [Cucumis melo var. makuwa]8.8e-2963.39Show/hide
Query:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM
        MRDHKPRSK+VLNE +DE+T     V     VD  +TS  SHPSQ LR+PRRS RI+SQP+RY+  T+ QV+IP DG+ED  +YK  M DVDKD+W+K M
Subjt:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM

Query:  DLEMESMYFNSV
        DLEMESMYFNSV
Subjt:  DLEMESMYFNSV

KAA0050621.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-2964.29Show/hide
Query:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM
        MRDHKPRSK+VLNE +DE+T     V     VD  +TS  SHPSQ LR+PRRS RI+SQP+RY+  TE QV IP DG+ED  +YK+ M DVDKD+W+K M
Subjt:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM

Query:  DLEMESMYFNSV
        DLEMESMYFNSV
Subjt:  DLEMESMYFNSV

KAA0063740.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-2963.39Show/hide
Query:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM
        MRDHKPRSK+VLNE  DE+T     V     VD  +TS  SHPSQ LR+PRRS RI+SQP+RY+  TE QV+IPYDG+ED  +YK+ M DVDK +W+K +
Subjt:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM

Query:  DLEMESMYFNSV
        DLEMESMYFNSV
Subjt:  DLEMESMYFNSV

TYK20422.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2963.39Show/hide
Query:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM
        MRDHKPRSK+VLNE +DE+T    +V     VD  +TS  SHPSQ LR+PRRS RI+SQP+RY+  TE QV+IP DG+ED  +YK+ M DVDKD+W+K M
Subjt:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM

Query:  DLEMESMYFNSV
        DLEMESMYFNS+
Subjt:  DLEMESMYFNSV

TrEMBL top hitse value%identityAlignment
A0A5A7TYX5 Gag/pol protein4.3e-2963.39Show/hide
Query:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM
        MRDHKPRSK+VLNE +DE+T     V     VD  +TS  SHPSQ LR+PRRS RI+SQP+RY+  T+ QV+IP DG+ED  +YK  M DVDKD+W+K M
Subjt:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM

Query:  DLEMESMYFNSV
        DLEMESMYFNSV
Subjt:  DLEMESMYFNSV

A0A5A7UAP2 Gag/pol protein8.6e-3064.29Show/hide
Query:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM
        MRDHKPRSK+VLNE +DE+T     V     VD  +TS  SHPSQ LR+PRRS RI+SQP+RY+  TE QV IP DG+ED  +YK+ M DVDKD+W+K M
Subjt:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM

Query:  DLEMESMYFNSV
        DLEMESMYFNSV
Subjt:  DLEMESMYFNSV

A0A5A7V970 Gag/pol protein1.9e-2963.39Show/hide
Query:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM
        MRDHKPRSK+VLNE  DE+T     V     VD  +TS  SHPSQ LR+PRRS RI+SQP+RY+  TE QV+IPYDG+ED  +YK+ M DVDK +W+K +
Subjt:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM

Query:  DLEMESMYFNSV
        DLEMESMYFNSV
Subjt:  DLEMESMYFNSV

A0A5D3DA25 Gag/pol protein1.5e-2963.39Show/hide
Query:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM
        MRDHKPRSK+VLNE +DE+T    +V     VD  +TS  SHPSQ LR+PRRS RI+SQP+RY+  TE QV+IP DG+ED  +YK+ M DVDKD+W+K M
Subjt:  MRDHKPRSKVVLNEISDEATNTSTRV-----VDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVM

Query:  DLEMESMYFNSV
        DLEMESMYFNS+
Subjt:  DLEMESMYFNSV

A0A5D3DWG0 Gag/pol protein2.5e-2962.73Show/hide
Query:  MRDHKPRSKVVLNEISDEATN---TSTRVVDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVMDL
        +RDH+PRSK+VLNEIS  ATN   +ST+VVD    S  +HPSQEL+ PRRS R++ QPDRY+  +E QV+IP DG+ED  TYK+ M D+D+D+WIK MDL
Subjt:  MRDHKPRSKVVLNEISDEATN---TSTRVVDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVMDL

Query:  EMESMYFNSV
        EMESM+FNSV
Subjt:  EMESMYFNSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGATCATAAACCACGAAGCAAGGTTGTGTTAAATGAGATTTCTGATGAAGCTACAAATACATCAACAAGAGTTGTTGATGGCGCTAGTACATCACGTTTGTCACA
TCCATCTCAAGAGTTGAGAGTGCCTCGACGTAGTGAAAGAATTATGTCACAACCTGATCGTTACGTGGCTTCAACAGAAATCCAGGTCCTCATACCTTATGATGGCATTG
AGGATCTATGGACATACAAAAGGGAAATGAAAGATGTTGATAAGGACAAATGGATCAAAGTTATGGACTTGGAAATGGAGTCTATGTACTTCAATTCCGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGATCATAAACCACGAAGCAAGGTTGTGTTAAATGAGATTTCTGATGAAGCTACAAATACATCAACAAGAGTTGTTGATGGCGCTAGTACATCACGTTTGTCACA
TCCATCTCAAGAGTTGAGAGTGCCTCGACGTAGTGAAAGAATTATGTCACAACCTGATCGTTACGTGGCTTCAACAGAAATCCAGGTCCTCATACCTTATGATGGCATTG
AGGATCTATGGACATACAAAAGGGAAATGAAAGATGTTGATAAGGACAAATGGATCAAAGTTATGGACTTGGAAATGGAGTCTATGTACTTCAATTCCGTCTAG
Protein sequenceShow/hide protein sequence
MRDHKPRSKVVLNEISDEATNTSTRVVDGASTSRLSHPSQELRVPRRSERIMSQPDRYVASTEIQVLIPYDGIEDLWTYKREMKDVDKDKWIKVMDLEMESMYFNSV