; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g27640 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g27640
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description40S ribosomal protein S24
Genome locationchr6:20798512..20801224
RNA-Seq ExpressionMoc06g27640
SyntenyMoc06g27640
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001976 - Ribosomal protein S24e
IPR012678 - Ribosomal protein L23/L15e core domain superfamily
IPR018098 - Ribosomal S24e conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588329.1 40S ribosomal protein S24-2, partial [Cucurbita argyrosperma subsp. sororia]2.8e-6497.81Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL RIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVE+AKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_008462725.1 PREDICTED: 40S ribosomal protein S24-1 [Cucumis melo]2.2e-6498.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKL RIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVE+AKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_022153539.1 40S ribosomal protein S24-1-like [Momordica charantia]2.0e-65100Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_022933090.1 40S ribosomal protein S24-1-like [Cucurbita moschata]2.8e-6497.81Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL RIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVE+AKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_022937688.1 40S ribosomal protein S24-1-like [Cucurbita moschata]2.2e-6497.81Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLGRIYDVKD NAIFVFKFRTHFGGGKSTGFGLIYDSVE+AKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

TrEMBL top hitse value%identityAlignment
A0A1S3CHL4 40S ribosomal protein S241.1e-6498.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKL RIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVE+AKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A5D3E1B6 40S ribosomal protein S241.1e-6498.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKL RIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVE+AKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A6J1DJC8 40S ribosomal protein S249.5e-66100Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A6J1FGN1 40S ribosomal protein S241.1e-6497.81Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLGRIYDVKD NAIFVFKFRTHFGGGKSTGFGLIYDSVE+AKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A6J1HN66 40S ribosomal protein S241.1e-6497.81Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLGRIYDVKD NAIFVFKFRTHFGGGKSTGFGLIYDSVE+AKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

SwissProt top hitse value%identityAlignment
Q56JU9 40S ribosomal protein S244.4e-3663.64Show/hide
Query:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDTKVEKS
        VTIRTRKFMTNRLL RKQ +IDVLHPG+  V K E++EKL ++Y     + IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + S
Subjt:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDTKVEKS

Query:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        RKQ KERKNR KK+RG  K        AGKKK
Subjt:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

Q5RAQ8 40S ribosomal protein S244.4e-3663.64Show/hide
Query:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDTKVEKS
        VTIRTRKFMTNRLL RKQ +IDVLHPG+  V K E++EKL ++Y     + IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + S
Subjt:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDTKVEKS

Query:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        RKQ KERKNR KK+RG  K        AGKKK
Subjt:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

Q8LC83 40S ribosomal protein S24-26.0e-5784.85Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MA+KAVTIRTR FMTNRLL+RKQF+IDVLHPGR NVSKAELKEKL R+Y+VKD NAIF FKFRTHFGGGKS+G+GLIYD+VE+AKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA D  K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Q962Q6 40S ribosomal protein S243.6e-3862.12Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        M +   TIRTRKFMTNRLL+RKQ + DVLHPG+P VSK E++EKL ++Y V   + +FVF F+T+FGGGKSTGF LIYD+++ AKK+EPK+RL R+GL  
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K   +RKQ KERKNR KK+RG KK+K   AAK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Q9SS17 40S ribosomal protein S24-11.3e-5989.39Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MA+KAVTIRTRKFMTNRLLSRKQF+IDVLHPGR NVSKAELKEKL R+Y+VKD NAIFVFKFRTHFGGGKS+GFGLIYD+VESAKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA DA K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Arabidopsis top hitse value%identityAlignment
AT3G04920.1 Ribosomal protein S24e family protein9.1e-6189.39Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MA+KAVTIRTRKFMTNRLLSRKQF+IDVLHPGR NVSKAELKEKL R+Y+VKD NAIFVFKFRTHFGGGKS+GFGLIYD+VESAKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA DA K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

AT5G28060.1 Ribosomal protein S24e family protein4.2e-5884.85Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT
        MA+KAVTIRTR FMTNRLL+RKQF+IDVLHPGR NVSKAELKEKL R+Y+VKD NAIF FKFRTHFGGGKS+G+GLIYD+VE+AKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA D  K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACAAGGCAGTCACCATTCGGACCAGAAAGTTCATGACTAACAGGCTTCTCTCTAGGAAGCAGTTCATCATTGATGTTCTTCACCCAGGAAGGCCGAACGTCTC
CAAGGCAGAGCTGAAGGAAAAGCTTGGAAGAATATATGACGTGAAGGATGCAAATGCGATTTTTGTATTCAAGTTCCGTACACATTTTGGAGGTGGAAAATCAACTGGAT
TCGGTTTGATTTATGATTCTGTTGAAAGTGCCAAAAAGTACGAGCCTAAGTACAGACTCATCAGGAATGGACTCGACACTAAAGTAGAAAAATCGAGGAAGCAAATGAAG
GAGAGGAAGAACAGAGCCAAGAAGATTCGTGGAGTAAAGAAAACAAAGGCCTCAGACGCTGCCAAGGCTGGAAAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACAAGGCAGTCACCATTCGGACCAGAAAGTTCATGACTAACAGGCTTCTCTCTAGGAAGCAGTTCATCATTGATGTTCTTCACCCAGGAAGGCCGAACGTCTC
CAAGGCAGAGCTGAAGGAAAAGCTTGGAAGAATATATGACGTGAAGGATGCAAATGCGATTTTTGTATTCAAGTTCCGTACACATTTTGGAGGTGGAAAATCAACTGGAT
TCGGTTTGATTTATGATTCTGTTGAAAGTGCCAAAAAGTACGAGCCTAAGTACAGACTCATCAGGAATGGACTCGACACTAAAGTAGAAAAATCGAGGAAGCAAATGAAG
GAGAGGAAGAACAGAGCCAAGAAGATTCGTGGAGTAAAGAAAACAAAGGCCTCAGACGCTGCCAAGGCTGGAAAGAAGAAATGA
Protein sequenceShow/hide protein sequence
MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLGRIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLDTKVEKSRKQMK
ERKNRAKKIRGVKKTKASDAAKAGKKK