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Moc06g27670 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g27670
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionKeratin, type II cytoskeletal 1-like
Genome locationchr6:20831843..20840690
RNA-Seq ExpressionMoc06g27670
SyntenyMoc06g27670
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:1901564 - organonitrogen compound metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045111.1 putative glutathione S-transferase isoform X1 [Cucumis melo var. makuwa]1.9e-1550Show/hide
Query:  LETYIDEDSEIPTKYVQITEGNIMLQK----------INPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
        LE+Y+D ++E P KY+  T    ++            +NP Y  WKRQDRLI SW+LGSM E+IL+ +LHC SAK+IWQ++Q I+SSR LAK
Subjt:  LETYIDEDSEIPTKYVQITEGNIMLQK----------INPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.8e-1758.33Show/hide
Query:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
        LE +++ +SE P+KY+  TE +        NPAY  WKRQDRLI SW+LGSMSEEIL+ +LHC+SAKEIW+++Q IFSSR LA+
Subjt:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
KAA0067213.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]1.5e-1554.02Show/hide
Query:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTR
        LE +++ +SE P+KY+  T  +     +  NP Y  WKRQDRLI SW+LGSMSEEIL+ +LHC+SAKEIW ++Q IFSSR LA+  +
Subjt:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTR
TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.8e-1758.33Show/hide
Query:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
        LE +++ +SE P+KY+  TE +        NPAY  WKRQDRLI SW+LGSMSEEIL+ +LHC+SAKEIW+++Q IFSSR LA+
Subjt:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
TYK18917.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]1.5e-1554.02Show/hide
Query:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTR
        LE +++ +SE P+KY+  T  +     +  NP Y  WKRQDRLI SW+LGSMSEEIL+ +LHC+SAKEIW ++Q IFSSR LA+  +
Subjt:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTR
TrEMBL top hitse value%identityAlignment
A0A5A7TUB3 Putative glutathione S-transferase isoform X19.3e-1650Show/hide
Query:  LETYIDEDSEIPTKYVQITEGNIMLQK----------INPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
        LE+Y+D ++E P KY+  T    ++            +NP Y  WKRQDRLI SW+LGSM E+IL+ +LHC SAK+IWQ++Q I+SSR LAK
Subjt:  LETYIDEDSEIPTKYVQITEGNIMLQK----------INPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-943.8e-1758.33Show/hide
Query:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
        LE +++ +SE P+KY+  TE +        NPAY  WKRQDRLI SW+LGSMSEEIL+ +LHC+SAKEIW+++Q IFSSR LA+
Subjt:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
A0A5A7VGJ8 Keratin, type II cytoskeletal 1-like7.1e-1654.02Show/hide
Query:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTR
        LE +++ +SE P+KY+  T  +     +  NP Y  WKRQDRLI SW+LGSMSEEIL+ +LHC+SAKEIW ++Q IFSSR LA+  +
Subjt:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTR
A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-943.8e-1758.33Show/hide
Query:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
        LE +++ +SE P+KY+  TE +        NPAY  WKRQDRLI SW+LGSMSEEIL+ +LHC+SAKEIW+++Q IFSSR LA+
Subjt:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAK
A0A5D3D5T2 Keratin, type II cytoskeletal 1-like7.1e-1654.02Show/hide
Query:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTR
        LE +++ +SE P+KY+  T  +     +  NP Y  WKRQDRLI SW+LGSMSEEIL+ +LHC+SAKEIW ++Q IFSSR LA+  +
Subjt:  LETYIDEDSEIPTKYVQITEGN--IMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTR
SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.7e-0629.29Show/hide
Query:  LETYIDEDSEIPTKYVQITEGNIMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTRIVQYKTNWLFYTTT
        L  ++D  + +P      T G     ++NP YT WKRQD+LI S +LG++S  +   +    +A +IW++++KI+++ +    T++      W   T T
Subjt:  LETYIDEDSEIPTKYVQITEGNIMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTRIVQYKTNWLFYTTT
Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.4e-0629.07Show/hide
Query:  LETYIDEDSEIPTKYVQITEGNIMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTRI
        L  ++D  + +P      T G   + ++NP YT W+RQD+LI S +LG++S  +   +    +A +IW++++KI+++ +    T++
Subjt:  LETYIDEDSEIPTKYVQITEGNIMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFSSRNLAKGTRI
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACTTAGTTCTAGCTCCGAACAAGGATGGGTATCACAAATCGAGCTTCAATTTGGCAAAAATCATCGAGACGCCATGGCCCGTCACTGCTGCACCTGTTCCACG
CTCAGGCCACCGCAAACCCGACGCAATAACCCGCAAGGAAGACGTCGTCGGTCAGGCTGCCGTGGATACTGCTAGGGAGTTACGCCGACGCTACCCGTGTACGAGGAAGA
TACCGATCGATGTTGGCACCGCTCGTGGAGAAAACCCGTCGGGGAAGACGCAGCCGTGGAGCTCGCTGCACACGTCCGCTGTTCGTGGGTCTGCTCGATGTCAGCCGCCG
CCAGAGAAGAACTTGAACTGCCATGGGCGACGCCGTCGCTGGAGGGCTGGGTCGCCGGAGGGAGCTGTTGCCGGTTTTGGCAGCGATAGAAGGCAAAATGGGCTTGAAAC
GTACATCGATGAAGATTCTGAAATCCCAACAAAATACGTTCAAATCACTGAAGGGAATATAATGTTGCAGAAAATCAATCCAGCTTATACAAATTGGAAGCGCCAAGATA
GGCTCATTATTTCTTGGATGCTAGGATCGATGTCTGAAGAGATCCTATCTGATCTATTGCATTGTCAGTCGGCAAAAGAAATTTGGCAAAGTGTTCAAAAAATTTTCTCC
TCTCGAAATCTTGCCAAGGGTACCAGGATTGTACAATACAAAACTAATTGGCTCTTCTACACAACCACAGACACCAGTGTCTGCTATGCTGGTCATGAACTTTCAGGGGG
TCAACAAATTCACACAGCCAGTGGTGCAGAGACGCCTAGCGTTGGGATTTTCTCTACCTTTAAAAAGAGTAGAGACTCGTGCAAGCGCACACGATCACAAGTAATACTTG
GGAGTAATCCAAGGTCAAATCCTCAGGGACTTGTTGCTTTTCAAAACAGTTTAATGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACTTAGTTCTAGCTCCGAACAAGGATGGGTATCACAAATCGAGCTTCAATTTGGCAAAAATCATCGAGACGCCATGGCCCGTCACTGCTGCACCTGTTCCACG
CTCAGGCCACCGCAAACCCGACGCAATAACCCGCAAGGAAGACGTCGTCGGTCAGGCTGCCGTGGATACTGCTAGGGAGTTACGCCGACGCTACCCGTGTACGAGGAAGA
TACCGATCGATGTTGGCACCGCTCGTGGAGAAAACCCGTCGGGGAAGACGCAGCCGTGGAGCTCGCTGCACACGTCCGCTGTTCGTGGGTCTGCTCGATGTCAGCCGCCG
CCAGAGAAGAACTTGAACTGCCATGGGCGACGCCGTCGCTGGAGGGCTGGGTCGCCGGAGGGAGCTGTTGCCGGTTTTGGCAGCGATAGAAGGCAAAATGGGCTTGAAAC
GTACATCGATGAAGATTCTGAAATCCCAACAAAATACGTTCAAATCACTGAAGGGAATATAATGTTGCAGAAAATCAATCCAGCTTATACAAATTGGAAGCGCCAAGATA
GGCTCATTATTTCTTGGATGCTAGGATCGATGTCTGAAGAGATCCTATCTGATCTATTGCATTGTCAGTCGGCAAAAGAAATTTGGCAAAGTGTTCAAAAAATTTTCTCC
TCTCGAAATCTTGCCAAGGGTACCAGGATTGTACAATACAAAACTAATTGGCTCTTCTACACAACCACAGACACCAGTGTCTGCTATGCTGGTCATGAACTTTCAGGGGG
TCAACAAATTCACACAGCCAGTGGTGCAGAGACGCCTAGCGTTGGGATTTTCTCTACCTTTAAAAAGAGTAGAGACTCGTGCAAGCGCACACGATCACAAGTAATACTTG
GGAGTAATCCAAGGTCAAATCCTCAGGGACTTGTTGCTTTTCAAAACAGTTTAATGAAGTGA
Protein sequenceShow/hide protein sequence
MGNLVLAPNKDGYHKSSFNLAKIIETPWPVTAAPVPRSGHRKPDAITRKEDVVGQAAVDTARELRRRYPCTRKIPIDVGTARGENPSGKTQPWSSLHTSAVRGSARCQPP
PEKNLNCHGRRRRWRAGSPEGAVAGFGSDRRQNGLETYIDEDSEIPTKYVQITEGNIMLQKINPAYTNWKRQDRLIISWMLGSMSEEILSDLLHCQSAKEIWQSVQKIFS
SRNLAKGTRIVQYKTNWLFYTTTDTSVCYAGHELSGGQQIHTASGAETPSVGIFSTFKKSRDSCKRTRSQVILGSNPRSNPQGLVAFQNSLMK