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Moc06g27710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g27710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr6:20859031..20859540
RNA-Seq ExpressionMoc06g27710
SyntenyMoc06g27710
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141796.1 uncharacterized protein LOC111012081 [Momordica charantia]4.7e-7787.43Show/hide
Query:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
        +KP+DG KDPKDYVEVFEGLMDFQA S+AIKCRAFQI LTGSARLWYRRLPARSISTYSQLR+EF++QFSSRHYD+KTATHLATIRQKEGETLREYVTRF
Subjt:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF

Query:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKR
        QEEQLKVAHCSDDSAMCYFL GLADE LT+KLGEEAPSTF EVLQKTKKVIDG ELLRTK G  +++
Subjt:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKR
XP_022152362.1 uncharacterized protein LOC111020105 [Momordica charantia]1.8e-7685.8Show/hide
Query:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
        MKP+DG KDPKDYVEVFEGL+DFQ  ++AIKCRAFQI  TGSARLWYR+LPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQK+GETLREYVTRF
Subjt:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF

Query:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
        QEEQLKVAHCSDDSAMCYFL GLADETLT+KLG+EAP+TF EVLQK KKVIDGQELL+TK+G  +K+ D
Subjt:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]1.8e-7686.83Show/hide
Query:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
        +KP+DG KDPKDYVEVFEGLMDFQAAS+AIKCRAFQI LTGSARLWYRRLP RSISTYSQLR+EF++QFSSRHYD+KTATHLATIRQKEGETLREYVTRF
Subjt:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF

Query:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKR
        QEEQLKVAHCSDDSAMCYFL GLADE LT+KLGEEAP+TF EVLQK KKVIDGQELLRTK G  +++
Subjt:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKR
XP_022157448.1 uncharacterized protein LOC111024144 [Momordica charantia]8.6e-7989.35Show/hide
Query:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
        MKP+DGYKDPKDYVEVFEGL+DFQAASNAIKCRAFQI LTG+ARLWYRRL ARSISTYSQL+KEFISQFS R YDRKTATHLATIRQKEGETLREYVTRF
Subjt:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF

Query:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
        Q+EQLKVAHCSDDS MCYF  GLADETLT+KLGEEAPSTF EVLQK KKVIDGQELL+TK G TDKRSD
Subjt:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]3.1e-7687.57Show/hide
Query:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
        MKP+DG KDPKDYVEVFEGLMDFQAA++AIKCRAFQI LT SARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
Subjt:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF

Query:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
         EEQLKVAHCSDDSAMCYFL GLADE LT+KLGEEAP+TF EVLQK KKVIDGQELL+TK    +K+ D
Subjt:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
TrEMBL top hitse value%identityAlignment
A0A6J1CKB3 uncharacterized protein LOC1110120812.3e-7787.43Show/hide
Query:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
        +KP+DG KDPKDYVEVFEGLMDFQA S+AIKCRAFQI LTGSARLWYRRLPARSISTYSQLR+EF++QFSSRHYD+KTATHLATIRQKEGETLREYVTRF
Subjt:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF

Query:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKR
        QEEQLKVAHCSDDSAMCYFL GLADE LT+KLGEEAPSTF EVLQKTKKVIDG ELLRTK G  +++
Subjt:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKR
A0A6J1DG02 uncharacterized protein LOC1110201058.7e-7785.8Show/hide
Query:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
        MKP+DG KDPKDYVEVFEGL+DFQ  ++AIKCRAFQI  TGSARLWYR+LPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQK+GETLREYVTRF
Subjt:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF

Query:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
        QEEQLKVAHCSDDSAMCYFL GLADETLT+KLG+EAP+TF EVLQK KKVIDGQELL+TK+G  +K+ D
Subjt:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
A0A6J1DS95 uncharacterized protein LOC1110234218.7e-7786.83Show/hide
Query:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
        +KP+DG KDPKDYVEVFEGLMDFQAAS+AIKCRAFQI LTGSARLWYRRLP RSISTYSQLR+EF++QFSSRHYD+KTATHLATIRQKEGETLREYVTRF
Subjt:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF

Query:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKR
        QEEQLKVAHCSDDSAMCYFL GLADE LT+KLGEEAP+TF EVLQK KKVIDGQELLRTK G  +++
Subjt:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKR
A0A6J1DTD9 uncharacterized protein LOC1110241444.2e-7989.35Show/hide
Query:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
        MKP+DGYKDPKDYVEVFEGL+DFQAASNAIKCRAFQI LTG+ARLWYRRL ARSISTYSQL+KEFISQFS R YDRKTATHLATIRQKEGETLREYVTRF
Subjt:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF

Query:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
        Q+EQLKVAHCSDDS MCYF  GLADETLT+KLGEEAPSTF EVLQK KKVIDGQELL+TK G TDKRSD
Subjt:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
A0A6J1DY58 uncharacterized protein LOC1110256631.5e-7687.57Show/hide
Query:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
        MKP+DG KDPKDYVEVFEGLMDFQAA++AIKCRAFQI LT SARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF
Subjt:  MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRF

Query:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
         EEQLKVAHCSDDSAMCYFL GLADE LT+KLGEEAP+TF EVLQK KKVIDGQELL+TK    +K+ D
Subjt:  QEEQLKVAHCSDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTTTTGACGGGTATAAAGACCCGAAAGACTATGTGGAGGTCTTTGAAGGTCTCATGGACTTCCAAGCGGCATCCAACGCCATCAAATGCCGAGCCTTTCAGAT
TGTCCTTACAGGGAGTGCTCGGCTTTGGTACCGAAGGCTGCCAGCAAGATCGATCTCGACTTATAGCCAGTTGAGGAAAGAGTTCATCAGTCAATTCTCTTCTCGACATT
ATGACAGAAAGACAGCCACTCATCTAGCCACCATTCGACAAAAAGAGGGCGAGACTTTGAGAGAGTATGTGACTCGCTTCCAAGAGGAGCAGCTTAAGGTCGCGCACTGC
TCTGATGATTCTGCCATGTGCTACTTCCTCATTGGCCTAGCCGACGAGACTTTGACGATCAAACTAGGCGAGGAAGCGCCATCAACCTTTGATGAGGTCTTACAAAAGAC
CAAGAAGGTTATAGACGGGCAGGAGCTACTCAGAACCAAGCTAGGCTGGACAGACAAGAGGTCCGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCTTTTGACGGGTATAAAGACCCGAAAGACTATGTGGAGGTCTTTGAAGGTCTCATGGACTTCCAAGCGGCATCCAACGCCATCAAATGCCGAGCCTTTCAGAT
TGTCCTTACAGGGAGTGCTCGGCTTTGGTACCGAAGGCTGCCAGCAAGATCGATCTCGACTTATAGCCAGTTGAGGAAAGAGTTCATCAGTCAATTCTCTTCTCGACATT
ATGACAGAAAGACAGCCACTCATCTAGCCACCATTCGACAAAAAGAGGGCGAGACTTTGAGAGAGTATGTGACTCGCTTCCAAGAGGAGCAGCTTAAGGTCGCGCACTGC
TCTGATGATTCTGCCATGTGCTACTTCCTCATTGGCCTAGCCGACGAGACTTTGACGATCAAACTAGGCGAGGAAGCGCCATCAACCTTTGATGAGGTCTTACAAAAGAC
CAAGAAGGTTATAGACGGGCAGGAGCTACTCAGAACCAAGCTAGGCTGGACAGACAAGAGGTCCGACTAG
Protein sequenceShow/hide protein sequence
MKPFDGYKDPKDYVEVFEGLMDFQAASNAIKCRAFQIVLTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYVTRFQEEQLKVAHC
SDDSAMCYFLIGLADETLTIKLGEEAPSTFDEVLQKTKKVIDGQELLRTKLGWTDKRSD