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Moc06g28010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g28010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr6:21043487..21045933
RNA-Seq ExpressionMoc06g28010
SyntenyMoc06g28010
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]8.6e-4549.41Show/hide
Query:  HSVARIRATHP---TPLNSTLPDGGPSFNLDDDETNYCGQWDD-NDDNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSL-DP
        H  + IR  HP       + L D     NL DDE  + GQWDD  DD   EY    D   D E D D++  ++E +++AD   E   D      PSL  P
Subjt:  HSVARIRATHP---TPLNSTLPDGGPSFNLDDDETNYCGQWDD-NDDNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSL-DP

Query:  LTEVHTVSTNAPCAT--GQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGS
        + EV +VS NAPCAT  G  +    +  IG D+++    +DIA+GS FRSK+EL+F L+V A++ NFE++VKKS +SL +V C E+GC+W LRARKIKGS
Subjt:  LTEVHTVSTNAPCAT--GQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGS

Query:  DTFLISTFHELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI
        DTFLISTF E H   RE ++HDH+QA S VVGQLIK+NLED+SRRYRP+DI+ D+
Subjt:  DTFLISTFHELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI

XP_022156802.1 uncharacterized protein LOC111023635 [Momordica charantia]3.0e-4248.74Show/hide
Query:  LPDGGPSFNLDDDETNYCGQWDDND---DNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLD----PLTEVHTVSTNAPCAT
        L D   S NLDDDE +     D N    +N VEYE + D+ +D +  R  +  +++  +  D   E E   EDV     +     + E HTVS NAP  T
Subjt:  LPDGGPSFNLDDDETNYCGQWDDND---DNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLD----PLTEVHTVSTNAPCAT

Query:  GQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTFHELHSCIRE
         +    R +  I   N      E IA+   FRSKEEL+FKLSV AM+LNF+++VKKS K+L+TVGC+E GCKW LRA+ I+G D+F+IS F++ H C RE
Subjt:  GQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTFHELHSCIRE

Query:  VMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI
        V+ HDHRQARS VVGQL+KSN+EDVSR+YRPKDI+ND+
Subjt:  VMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI

XP_022156943.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]2.0e-3856.46Show/hide
Query:  VSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTF
        +S NAPC   + + S ++  I   N+     E IA+   FRSKE+L+FKLSV AM+ NFE++VKKS K+LYTVGC++ GCKW LR + I+  D+F+IS F
Subjt:  VSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTF

Query:  HELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI
        +++H C R+V+ HDHRQA+S VVGQL+KSNLEDVSR+YRPKDI+ND+
Subjt:  HELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI

XP_022158743.1 PKS-NRPS hybrid synthetase CHGG_01239-like [Momordica charantia]2.6e-5753.75Show/hide
Query:  PTPLNSTLP---------------DGGPSFNLDDDETNYCGQWDDNDDNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLDP
        P P++STLP               D   S+NL DDE NY  QWD++DDN    +  +D + D E     E  D EF +D  + NE EV+  DV   S  P
Subjt:  PTPLNSTLP---------------DGGPSFNLDDDETNYCGQWDDNDDNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLDP

Query:  LTEVHTVSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDT
        L E++ VS NAPCAT QASCSR +++  +  E+GL++E I + S F+S  ELQF  SV AM+LNFEYRVKKS KSL TVGC  DGCKW + AR+I+GSDT
Subjt:  LTEVHTVSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDT

Query:  FLISTFHELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI
        FLIS F  +H+C  EVMKHDHRQARS +VGQ+IK+N ED SRRYRPKDIVN++
Subjt:  FLISTFHELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI

XP_022159183.1 uncharacterized protein LOC111025603 [Momordica charantia]7.0e-5578.23Show/hide
Query:  VSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTF
        VSTNA CAT QAS SR + R   D+EVGLS +DIAIGSTFRSKEELQFKLSV AMR+NFEY VKKS KSLY +GCSEDGCKW+   RKI+GSD FLISTF
Subjt:  VSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTF

Query:  HELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI
        +E+HSCIREVMKHDHRQA+S VVGQ+IKSN EDVS RYRPKDIVND+
Subjt:  HELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI

TrEMBL top hitse value%identityAlignment
A0A6J1DL12 uncharacterized protein LOC1110220773.2e-3744.49Show/hide
Query:  NLDDDETNYCGQWDDNDDNHVEYE--------GEDD-----ENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLDPLTEVHTVSTNAPCATGQ
        NL DD+  Y   +D+  +N VEY+         EDD     E+ D + + + E +      + D +N+Q  +  D      +P+ EV +VS NA C    
Subjt:  NLDDDETNYCGQWDDNDDNHVEYE--------GEDD-----ENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLDPLTEVHTVSTNAPCATGQ

Query:  ASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTFHELHSCIREVM
            R  T+     +      DI +G  FRSK+EL+FKL V AM+LNFE+RVKKS K+LY VGC E GCKW L A +I+G+D+F IS + ++H+C +EV+
Subjt:  ASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTFHELHSCIREVM

Query:  KHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI
         HDHRQARS VVGQL+K+NLEDVSR YRPKDI+ D+
Subjt:  KHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI

A0A6J1DLB0 uncharacterized protein LOC1110219694.1e-4549.41Show/hide
Query:  HSVARIRATHP---TPLNSTLPDGGPSFNLDDDETNYCGQWDD-NDDNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSL-DP
        H  + IR  HP       + L D     NL DDE  + GQWDD  DD   EY    D   D E D D++  ++E +++AD   E   D      PSL  P
Subjt:  HSVARIRATHP---TPLNSTLPDGGPSFNLDDDETNYCGQWDD-NDDNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSL-DP

Query:  LTEVHTVSTNAPCAT--GQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGS
        + EV +VS NAPCAT  G  +    +  IG D+++    +DIA+GS FRSK+EL+F L+V A++ NFE++VKKS +SL +V C E+GC+W LRARKIKGS
Subjt:  LTEVHTVSTNAPCAT--GQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGS

Query:  DTFLISTFHELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI
        DTFLISTF E H   RE ++HDH+QA S VVGQLIK+NLED+SRRYRP+DI+ D+
Subjt:  DTFLISTFHELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI

A0A6J1DSY0 uncharacterized protein LOC1110236351.5e-4248.74Show/hide
Query:  LPDGGPSFNLDDDETNYCGQWDDND---DNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLD----PLTEVHTVSTNAPCAT
        L D   S NLDDDE +     D N    +N VEYE + D+ +D +  R  +  +++  +  D   E E   EDV     +     + E HTVS NAP  T
Subjt:  LPDGGPSFNLDDDETNYCGQWDDND---DNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLD----PLTEVHTVSTNAPCAT

Query:  GQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTFHELHSCIRE
         +    R +  I   N      E IA+   FRSKEEL+FKLSV AM+LNF+++VKKS K+L+TVGC+E GCKW LRA+ I+G D+F+IS F++ H C RE
Subjt:  GQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTFHELHSCIRE

Query:  VMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI
        V+ HDHRQARS VVGQL+KSN+EDVSR+YRPKDI+ND+
Subjt:  VMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI

A0A6J1DWY9 PKS-NRPS hybrid synthetase CHGG_01239-like1.2e-5753.75Show/hide
Query:  PTPLNSTLP---------------DGGPSFNLDDDETNYCGQWDDNDDNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLDP
        P P++STLP               D   S+NL DDE NY  QWD++DDN    +  +D + D E     E  D EF +D  + NE EV+  DV   S  P
Subjt:  PTPLNSTLP---------------DGGPSFNLDDDETNYCGQWDDNDDNHVEYEGEDDENHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLDP

Query:  LTEVHTVSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDT
        L E++ VS NAPCAT QASCSR +++  +  E+GL++E I + S F+S  ELQF  SV AM+LNFEYRVKKS KSL TVGC  DGCKW + AR+I+GSDT
Subjt:  LTEVHTVSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDT

Query:  FLISTFHELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI
        FLIS F  +H+C  EVMKHDHRQARS +VGQ+IK+N ED SRRYRPKDIVN++
Subjt:  FLISTFHELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI

A0A6J1DY41 uncharacterized protein LOC1110256033.4e-5578.23Show/hide
Query:  VSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTF
        VSTNA CAT QAS SR + R   D+EVGLS +DIAIGSTFRSKEELQFKLSV AMR+NFEY VKKS KSLY +GCSEDGCKW+   RKI+GSD FLISTF
Subjt:  VSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRVKKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTF

Query:  HELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI
        +E+HSCIREVMKHDHRQA+S VVGQ+IKSN EDVS RYRPKDIVND+
Subjt:  HELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCGCTATCCTCTTGGGTTTCGGGATCGTGCTTGTGGGAGCGTCGATTTGGAACAACTGCAAAAAACAAAAGCAGTTATGTGGGGATACCCCCACTCGCATG
TCTCCACACGAACGACCTGGATCGAGTCGTCTGTAACCTTTACAGAGTGGGCCGTATCCATAGTGTTGCTAGGATAAGGGCAACACACCCAACACCTTTGAATTCCACGC
TTCCGGATGGTGGTCCATCATTTAACCTAGATGATGATGAAACAAACTATTGCGGTCAATGGGATGACAATGATGACAATCACGTGGAGTATGAAGGTGAGGATGATGAG
AACCACGATACTGAGTTCGATCGAGATCATGAGAACCAGGATAATGAATTCGAGAGCGATGCTGATGTTGTGAACGAGCAAGAAGTAGACCTAGAGGATGTAGCCACTCC
ATCTTTGGACCCCTTGACCGAAGTGCACACGGTTAGTACGAATGCACCGTGTGCAACTGGTCAAGCTTCTTGCTCAAGGGTACTCACTCGGATAGGTGAGGACAATGAAG
TTGGTCTGTCAACTGAGGACATTGCGATAGGGAGTACCTTTCGATCGAAAGAAGAATTACAGTTCAAACTATCTGTGTCTGCGATGAGATTGAATTTTGAATATCGCGTG
AAAAAATCTAATAAGAGCTTGTATACTGTTGGATGCTCGGAGGATGGATGCAAATGGAACCTGCGTGCAAGGAAGATTAAAGGTTCGGATACTTTCCTTATCTCTACGTT
TCATGAGTTGCATAGTTGCATACGTGAGGTAATGAAACATGACCACCGACAAGCTCGAAGTCATGTCGTGGGTCAGCTCATAAAATCCAACCTGGAGGATGTAAGTCGTC
GTTATCGTCCAAAGGATATTGTTAATGACATATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTCGCTATCCTCTTGGGTTTCGGGATCGTGCTTGTGGGAGCGTCGATTTGGAACAACTGCAAAAAACAAAAGCAGTTATGTGGGGATACCCCCACTCGCATG
TCTCCACACGAACGACCTGGATCGAGTCGTCTGTAACCTTTACAGAGTGGGCCGTATCCATAGTGTTGCTAGGATAAGGGCAACACACCCAACACCTTTGAATTCCACGC
TTCCGGATGGTGGTCCATCATTTAACCTAGATGATGATGAAACAAACTATTGCGGTCAATGGGATGACAATGATGACAATCACGTGGAGTATGAAGGTGAGGATGATGAG
AACCACGATACTGAGTTCGATCGAGATCATGAGAACCAGGATAATGAATTCGAGAGCGATGCTGATGTTGTGAACGAGCAAGAAGTAGACCTAGAGGATGTAGCCACTCC
ATCTTTGGACCCCTTGACCGAAGTGCACACGGTTAGTACGAATGCACCGTGTGCAACTGGTCAAGCTTCTTGCTCAAGGGTACTCACTCGGATAGGTGAGGACAATGAAG
TTGGTCTGTCAACTGAGGACATTGCGATAGGGAGTACCTTTCGATCGAAAGAAGAATTACAGTTCAAACTATCTGTGTCTGCGATGAGATTGAATTTTGAATATCGCGTG
AAAAAATCTAATAAGAGCTTGTATACTGTTGGATGCTCGGAGGATGGATGCAAATGGAACCTGCGTGCAAGGAAGATTAAAGGTTCGGATACTTTCCTTATCTCTACGTT
TCATGAGTTGCATAGTTGCATACGTGAGGTAATGAAACATGACCACCGACAAGCTCGAAGTCATGTCGTGGGTCAGCTCATAAAATCCAACCTGGAGGATGTAAGTCGTC
GTTATCGTCCAAAGGATATTGTTAATGACATATAG
Protein sequenceShow/hide protein sequence
MSSSLSSWVSGSCLWERRFGTTAKNKSSYVGIPPLACLHTNDLDRVVCNLYRVGRIHSVARIRATHPTPLNSTLPDGGPSFNLDDDETNYCGQWDDNDDNHVEYEGEDDE
NHDTEFDRDHENQDNEFESDADVVNEQEVDLEDVATPSLDPLTEVHTVSTNAPCATGQASCSRVLTRIGEDNEVGLSTEDIAIGSTFRSKEELQFKLSVSAMRLNFEYRV
KKSNKSLYTVGCSEDGCKWNLRARKIKGSDTFLISTFHELHSCIREVMKHDHRQARSHVVGQLIKSNLEDVSRRYRPKDIVNDI