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Moc06g28050 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g28050
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:21060925..21061491
RNA-Seq ExpressionMoc06g28050
SyntenyMoc06g28050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382878.1 uncharacterized protein LOC107175701 [Citrus sinensis]1.8e-2129.74Show/hide
Query:  MRGRLMR--FEESWTNFEECRELLTQHWPT----LGNLSGEVYSTKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSS-NWRHIALEAEKDL
        MRG   R  +E+ W+ +E+CRE++   W        N   E++  K    + +L  W++    G  K  +   K +++ ++ + S  + R      E  +
Subjt:  MRGRLMR--FEESWTNFEECRELLTQHWPT----LGNLSGEVYSTKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSS-NWRHIALEAEKDL

Query:  ERLLEEEEIYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK
        + +L +EEI+W+QR+R DW++ GDRN K+FH +AS ++K NR+ GL   NG+W ++D ++  +   YF  +F  T+P  ++    L+++P  +T+
Subjt:  ERLLEEEEIYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]2.0e-2335.42Show/hide
Query:  RLMRFEESWTNFEECRELLTQHWPTLGNLSGEVYS-----TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRV--QMRGSSNWRHIALEAEKDLERL
        R  +FE  WT  E+C++++   W    N S EV S      +L CC   L +WN+ I  G++   I  KKE +  +    R  S    I +   K++  L
Subjt:  RLMRFEESWTNFEECRELLTQHWPTLGNLSGEVYS-----TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRV--QMRGSSNWRHIALEAEKDLERL

Query:  LEEEEIYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK
        L+ EEI W+QR+R  W+  GDRNTK+FH +AS RR+ N + G++  NG W D    ++ +A SYF  ++  + P       +LD+IPT +T+
Subjt:  LEEEEIYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK

XP_023902041.1 uncharacterized protein LOC112013897 [Quercus suber]4.8e-2235.33Show/hide
Query:  WTNFEECRELLTQHWPTLGNLSGEVYS-----TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRV--QMRGSSNWRHIALEAEKDLERLLEEEEIYW
        WT  E+C++++   W    N S EV S      +L CC   L +WN+ I  G++   I  KKE +  +    R  S    I +   K++  LL+ EEI W
Subjt:  WTNFEECRELLTQHWPTLGNLSGEVYS-----TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRV--QMRGSSNWRHIALEAEKDLERLLEEEEIYW

Query:  RQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK
        +QR+R  W+  GDRNTK+FH +AS RR+ N + G++  NG W D    ++ +A SYF  ++  + P       +LD+IPT +T+
Subjt:  RQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK

XP_023906330.1 uncharacterized protein LOC112018052 [Quercus suber]1.8e-2128.96Show/hide
Query:  RFEESWTNFEECRELLTQHWPTLGNLSGEVYS--TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSSNWRHIALEAEKDLERLLEEEEIYW
        RFEE W + +EC  ++ + W     +   ++    K+      L KW + +  G+ K ++  K  E+  +  +          E + ++  +L +EE+ W
Subjt:  RFEESWTNFEECRELLTQHWPTLGNLSGEVYS--TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSSNWRHIALEAEKDLERLLEEEEIYW

Query:  RQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNIT
        RQR+R  W+  GD+NTK+FH RA+QR++ N++ G+ +  G W  D+ +++ IA  YF  LF  + P D++  R+L+++   +T
Subjt:  RQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNIT

XP_030964026.1 uncharacterized protein LOC115985199 [Quercus lobata]4.8e-2234.64Show/hide
Query:  WTNFEECRELLTQHWPTLGNL-SGEVYSTKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRG-SSNWRHIALEAEKDLERLLEEEEIYWRQRAR
        W   EECR ++ + W    +L S    + +LS C   L KWN+ +  G +   I  K+E +  +  R    N         K++  LL+ EEI W+QRA+
Subjt:  WTNFEECRELLTQHWPTLGNL-SGEVYSTKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRG-SSNWRHIALEAEKDLERLLEEEEIYWRQRAR

Query:  KDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK
          W+  GDRNTK+FH RAS RR+ N +  ++  NG W D   E++ +A SYF  L+  + P      +++D+IPT +T+
Subjt:  KDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK

TrEMBL top hitse value%identityAlignment
A0A2N9EUT1 Uncharacterized protein4.7e-2337.7Show/hide
Query:  RGRLMRFEESWTNFEECRELLTQHWPTLGNLSGEVYS-TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRR---VQMRGSSNWRHIALEAEKDLERLL
        R ++ RFE  W   E C+  +   W    + S  V    ++  C R L  W+R+   GS++ A+A K++++ +   + M G  + R + L +E  L  LL
Subjt:  RGRLMRFEESWTNFEECRELLTQHWPTLGNLSGEVYS-TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRR---VQMRGSSNWRHIALEAEKDLERLL

Query:  EEEEIYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK
        E EE  W QR+R  W+Q GDRNT++FH RASQRR+ N + GL   NG W D   ++  IA  YF +LF    P D    R+LD IP  IT+
Subjt:  EEEEIYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK

A0A2N9F775 Reverse transcriptase domain-containing protein1.1e-2433.7Show/hide
Query:  LMRFEESWTNFEECRELLTQHWPTLGNLSGEVYS--TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSSNWRHIALEA-EKDLERLLEEEE
        + RFEE W     C E++   W    ++   ++    K+S C   L  WNR +  G+L   +  K E +  +    +    +I + A + ++  LL ++E
Subjt:  LMRFEESWTNFEECRELLTQHWPTLGNLSGEVYS--TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSSNWRHIALEA-EKDLERLLEEEE

Query:  IYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPD-NETGRILDSIPT
        I+WRQR+R+ W++ GDRNTK+FH +A QRR  N ++G++ +NGRW +D+  M  IA  YF D+F  +   +  ET R++D + T
Subjt:  IYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPD-NETGRILDSIPT

A0A2N9I611 Uncharacterized protein1.5e-2435.83Show/hide
Query:  RLMRFEESWTNFEECRELLTQHWPTLGNLSGEVYS--TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSSNWRHIALEAEKDLERLLEEEE
        RL RFE++WT  EEC +++   W    +     +    KL  C +EL  W++    G++K  +   +E +++++              + ++  LLE+EE
Subjt:  RLMRFEESWTNFEECRELLTQHWPTLGNLSGEVYS--TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSSNWRHIALEAEKDLERLLEEEE

Query:  IYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK
        +YW+QRAR  W++ GDRNTK+FH +A+QR+K N VKGL+   GRW  D  +M  IA  YF D+F  T+  D      LDS    I K
Subjt:  IYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK

A0A2N9I6L8 Reverse transcriptase domain-containing protein4.7e-2337.7Show/hide
Query:  RGRLMRFEESWTNFEECRELLTQHWPTLGNLSGEVYS-TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRR---VQMRGSSNWRHIALEAEKDLERLL
        R ++ RFE  W   E C+  +   W    + S  V    ++  C R L  W+R+   GS++ A+A K++++ +   + M G  + R + L +E  L  LL
Subjt:  RGRLMRFEESWTNFEECRELLTQHWPTLGNLSGEVYS-TKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRR---VQMRGSSNWRHIALEAEKDLERLL

Query:  EEEEIYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK
        E EE  W QR+R  W+Q GDRNT++FH RASQRR+ N + GL   NG W D   ++  IA  YF +LF    P D    R+LD IP  IT+
Subjt:  EEEEIYWRQRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK

A0A803PV25 Uncharacterized protein2.1e-2335.16Show/hide
Query:  FEESWTNFEECRELLTQHWPTLGNLSGEV--YSTKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSSNWRHIALEAEKDLERLLEEEEIYWR
        FEE+W   EEC E++ + W +  N+SG V  +  K++ C + L  WNR   +  L   +   K+ +  + M           + E  L  LLE++E YWR
Subjt:  FEESWTNFEECRELLTQHWPTLGNLSGEV--YSTKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSSNWRHIALEAEKDLERLLEEEEIYWR

Query:  QRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNIT
        QR+R  W+QWGDRNTK+FH +AS RRK N +KGL    G W DD + +  I   Y+  LF  +D  ++    +L  +   ++
Subjt:  QRARKDWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGAAGGTTGATGAGATTTGAGGAAAGTTGGACAAATTTTGAAGAATGCAGAGAACTACTTACTCAACATTGGCCGACCTTGGGGAACTTAAGTGGGGAGGTTTA
TTCAACGAAGCTTAGCTGTTGCATGAGAGAGCTCCATAAGTGGAATAGAGATATACTTCGAGGGTCGTTGAAGGGGGCCATTGCTTCAAAAAAGGAGGAAATAAGAAGGG
TCCAGATGAGGGGAAGTTCAAATTGGAGGCACATTGCTTTGGAGGCAGAAAAAGATCTAGAACGGTTGCTTGAAGAGGAGGAGATTTATTGGAGACAACGGGCTAGGAAA
GACTGGATTCAGTGGGGAGATCGTAATACAAAGTGGTTCCATCTTAGAGCCAGCCAAAGAAGGAAGACAAACAGAGTGAAAGGGCTAGTAAGTGCAAATGGTAGATGGAC
AGATGATGATATTGAAATGAGCGCAATTGCTACTTCATACTTCATTGATTTGTTTAAACCAACGGATCCACCAGACAATGAGACTGGCCGAATTTTGGACTCAATTCCAA
CAAATATAACAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGAAGGTTGATGAGATTTGAGGAAAGTTGGACAAATTTTGAAGAATGCAGAGAACTACTTACTCAACATTGGCCGACCTTGGGGAACTTAAGTGGGGAGGTTTA
TTCAACGAAGCTTAGCTGTTGCATGAGAGAGCTCCATAAGTGGAATAGAGATATACTTCGAGGGTCGTTGAAGGGGGCCATTGCTTCAAAAAAGGAGGAAATAAGAAGGG
TCCAGATGAGGGGAAGTTCAAATTGGAGGCACATTGCTTTGGAGGCAGAAAAAGATCTAGAACGGTTGCTTGAAGAGGAGGAGATTTATTGGAGACAACGGGCTAGGAAA
GACTGGATTCAGTGGGGAGATCGTAATACAAAGTGGTTCCATCTTAGAGCCAGCCAAAGAAGGAAGACAAACAGAGTGAAAGGGCTAGTAAGTGCAAATGGTAGATGGAC
AGATGATGATATTGAAATGAGCGCAATTGCTACTTCATACTTCATTGATTTGTTTAAACCAACGGATCCACCAGACAATGAGACTGGCCGAATTTTGGACTCAATTCCAA
CAAATATAACAAAATAG
Protein sequenceShow/hide protein sequence
MRGRLMRFEESWTNFEECRELLTQHWPTLGNLSGEVYSTKLSCCMRELHKWNRDILRGSLKGAIASKKEEIRRVQMRGSSNWRHIALEAEKDLERLLEEEEIYWRQRARK
DWIQWGDRNTKWFHLRASQRRKTNRVKGLVSANGRWTDDDIEMSAIATSYFIDLFKPTDPPDNETGRILDSIPTNITK