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Moc06g28060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g28060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:21062973..21063623
RNA-Seq ExpressionMoc06g28060
SyntenyMoc06g28060
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]9.1e-3336.96Show/hide
Query:  TLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFACF
        +L+ K +T K I  E  K+ +  IW T   V +E +G NIF  + +   D  +I+   PWLF+K L++L E   +    +L+FRY  FW+  H LP AC 
Subjt:  TLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFACF

Query:  SKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDC
        ++++ + +G ++GQ K+++  E G C GQ +++R+ +DV   L+RG+   +G       + I YE+LP+FCY CG IGH+++DC
Subjt:  SKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDC

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]5.7e-3538.31Show/hide
Query:  TLVCKLLTLKDIKGEIIKAMMPRIWTNIPVK---IEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFA
        +L+CKLL+ + I   ++K  +   W  +  K   ++ +G NIFL       D  +I+   PW F++AL++++ P +     +++FR  S W+HF +L  A
Subjt:  TLVCKLLTLKDIKGEIIKAMMPRIWTNIPVK---IEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFA

Query:  CFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDC-ESTEDPNEENLQY
        C +K MA  +GN IG F+ VE++ +  CWG  L+VR+R DV K L RG+   +       WIPI YE+LP F Y CG + H+LKDC +   D   +NLQY
Subjt:  CFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDC-ESTEDPNEENLQY

Query:  G
        G
Subjt:  G

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.6e-3737.13Show/hide
Query:  TLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFACF
        +LV KLL  + I  +++  ++   W     + +E +GKN+FL     + D+ +++   PW F+KAL++L++P ++ N  ELEF   +FW+H  +LP +  
Subjt:  TLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFACF

Query:  SKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCE----STEDPNEENLQ
        +K MAI +GN IG F  V+ +E G  WG +L++R+ +D+ K LRRG+   +       WIPI YE+LP FCY CG+IGH   DC+    + +D +    +
Subjt:  SKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCE----STEDPNEENLQ

Query:  YG
        YG
Subjt:  YG

XP_024041282.1 uncharacterized protein LOC112098886 [Citrus clementina]7.0e-3334.91Show/hide
Query:  LEKMKREYDRQAHNTLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYA
        + KMK + +      L+ K+L  + +  E +K  M R+W T+  VKIE +G N+F+ K   + D   II   PW F++ALM+L EP       + +FR+ 
Subjt:  LEKMKREYDRQAHNTLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYA

Query:  SFWLHFHELPFACFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCES
        SFW+  H++P  C +K+MA  +G ++G+ ++VETD  G   GQ L++RI +DV K L++ M+ + G   ++  I + YE+L  FC+ CG I H  ++C  
Subjt:  SFWLHFHELPFACFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCES

Query:  TEDPNEENLQYG
         +  +++ + YG
Subjt:  TEDPNEENLQYG

XP_024953751.1 uncharacterized protein LOC112498094 [Citrus sinensis]7.0e-3335.38Show/hide
Query:  KMKREYDRQAHNTLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASF
        KMK + ++     L+ K++  + +  E +K  M R+W T   VKIE +G NIF+ K   + D   I+   PW F++AL++L EP    +  + +F + SF
Subjt:  KMKREYDRQAHNTLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASF

Query:  WLHFHELPFACFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIP--ITYEKLPHFCYGCGIIGHVLKDCES
        W+  H++P  C +K+M  A+G  IG+ ++VETD  G C+GQ L++RI +D+ + L++ +  +    A+E  IP  + YE+LP FC+ CG IGH  ++C  
Subjt:  WLHFHELPFACFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIP--ITYEKLPHFCYGCGIIGHVLKDCES

Query:  TEDPNEENLQYG
         +  +++ L YG
Subjt:  TEDPNEENLQYG

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)1.3e-3235.55Show/hide
Query:  KMKREYDRQAHNTLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASF
        +MK   ++     LV K+L  +++  E +K  M R+W T+  VKIE++G+N+F+ K   + D   I+   PW F++AL+ L EP    +  + +F + SF
Subjt:  KMKREYDRQAHNTLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASF

Query:  WLHFHELPFACFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGM-MFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCEST
        W+  H++P  C SK MA  +G +IG+ ++VETD  G C+GQ L++RI +D+ K L++ + + +    AD+  + + YE+LP FC+ CG IGH  ++C   
Subjt:  WLHFHELPFACFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGM-MFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCEST

Query:  EDPNEENLQYG
        +  +++ L YG
Subjt:  EDPNEENLQYG

A0A5C7GZQ4 CCHC-type domain-containing protein1.7e-3235.82Show/hide
Query:  LVCKLLTLKDIKGEIIKAMMPRIWTNI-PVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFACFS
        L  KLL++K +  E   +++PRIW  +   +IE +  NIF    K + D   ++   PW F+KAL++LEEP    +  E++F   +FW+  H++P  C +
Subjt:  LVCKLLTLKDIKGEIIKAMMPRIWTNI-PVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFACFS

Query:  KKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCE---STEDPNEENLQYG
         ++   +G+MIG+ K+++    G C G+ ++VR+ +DV K LRR +   V     E  + + YE+LP  CY CG IGHV++DC    S+ +P + NL +G
Subjt:  KKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCE---STEDPNEENLQYG

Query:  S
        S
Subjt:  S

A0A5C7H9Y2 CCHC-type domain-containing protein4.4e-3336.96Show/hide
Query:  TLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFACF
        +L+ K +T K I  E  K+ +  IW T   V +E +G NIF  + +   D  +I+   PWLF+K L++L E   +    +L+FRY  FW+  H LP AC 
Subjt:  TLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFACF

Query:  SKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDC
        ++++ + +G ++GQ K+++  E G C GQ +++R+ +DV   L+RG+   +G       + I YE+LP+FCY CG IGH+++DC
Subjt:  SKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDC

A0A6J1BSZ1 uncharacterized protein LOC1110054812.8e-3538.31Show/hide
Query:  TLVCKLLTLKDIKGEIIKAMMPRIWTNIPVK---IEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFA
        +L+CKLL+ + I   ++K  +   W  +  K   ++ +G NIFL       D  +I+   PW F++AL++++ P +     +++FR  S W+HF +L  A
Subjt:  TLVCKLLTLKDIKGEIIKAMMPRIWTNIPVK---IEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFA

Query:  CFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDC-ESTEDPNEENLQY
        C +K MA  +GN IG F+ VE++ +  CWG  L+VR+R DV K L RG+   +       WIPI YE+LP F Y CG + H+LKDC +   D   +NLQY
Subjt:  CFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDC-ESTEDPNEENLQY

Query:  G
        G
Subjt:  G

A0A6J1DU55 uncharacterized protein LOC1110231351.7e-3737.13Show/hide
Query:  TLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFACF
        +LV KLL  + I  +++  ++   W     + +E +GKN+FL     + D+ +++   PW F+KAL++L++P ++ N  ELEF   +FW+H  +LP +  
Subjt:  TLVCKLLTLKDIKGEIIKAMMPRIW-TNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFHELPFACF

Query:  SKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCE----STEDPNEENLQ
        +K MAI +GN IG F  V+ +E G  WG +L++R+ +D+ K LRRG+   +       WIPI YE+LP FCY CG+IGH   DC+    + +D +    +
Subjt:  SKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCE----STEDPNEENLQ

Query:  YG
        YG
Subjt:  YG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTGATATTGGAAAAGATGAAGAGAGAATATGATAGACAAGCGCATAATACTCTAGTTTGCAAACTTCTCACACTTAAGGATATCAAGGGAGAGATCATTAAAGC
CATGATGCCACGAATCTGGACAAATATCCCTGTGAAGATTGAGCAAGTGGGGAAGAACATCTTCCTTTGCAAATTGAAGTTTCAGCGGGATATAATCAAGATAATCAACA
ACAGTCCGTGGCTTTTCAACAAAGCGTTGATGCTTCTAGAGGAGCCAAAGGCCAACTGCAATTTCCACGAATTGGAATTCAGGTACGCATCATTTTGGCTGCATTTCCAT
GAACTACCATTTGCTTGTTTTTCCAAGAAGATGGCAATCGCAATTGGAAACATGATTGGCCAATTCAAGAAAGTAGAGACGGACGAAGATGGACGATGTTGGGGACAAAC
TTTGAAAGTCAGGATCCGGCTGGATGTTCGAAAGGCTCTAAGGCGGGGGATGATGTTCAAGGTGGGGGCGATGGCTGATGAAAGATGGATCCCTATAACTTATGAAAAGC
TTCCCCATTTCTGTTACGGATGTGGAATAATTGGTCACGTCCTTAAGGATTGCGAGTCAACTGAGGATCCAAATGAAGAGAACTTGCAATATGGGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTGATATTGGAAAAGATGAAGAGAGAATATGATAGACAAGCGCATAATACTCTAGTTTGCAAACTTCTCACACTTAAGGATATCAAGGGAGAGATCATTAAAGC
CATGATGCCACGAATCTGGACAAATATCCCTGTGAAGATTGAGCAAGTGGGGAAGAACATCTTCCTTTGCAAATTGAAGTTTCAGCGGGATATAATCAAGATAATCAACA
ACAGTCCGTGGCTTTTCAACAAAGCGTTGATGCTTCTAGAGGAGCCAAAGGCCAACTGCAATTTCCACGAATTGGAATTCAGGTACGCATCATTTTGGCTGCATTTCCAT
GAACTACCATTTGCTTGTTTTTCCAAGAAGATGGCAATCGCAATTGGAAACATGATTGGCCAATTCAAGAAAGTAGAGACGGACGAAGATGGACGATGTTGGGGACAAAC
TTTGAAAGTCAGGATCCGGCTGGATGTTCGAAAGGCTCTAAGGCGGGGGATGATGTTCAAGGTGGGGGCGATGGCTGATGAAAGATGGATCCCTATAACTTATGAAAAGC
TTCCCCATTTCTGTTACGGATGTGGAATAATTGGTCACGTCCTTAAGGATTGCGAGTCAACTGAGGATCCAAATGAAGAGAACTTGCAATATGGGTCTTGA
Protein sequenceShow/hide protein sequence
MFLILEKMKREYDRQAHNTLVCKLLTLKDIKGEIIKAMMPRIWTNIPVKIEQVGKNIFLCKLKFQRDIIKIINNSPWLFNKALMLLEEPKANCNFHELEFRYASFWLHFH
ELPFACFSKKMAIAIGNMIGQFKKVETDEDGRCWGQTLKVRIRLDVRKALRRGMMFKVGAMADERWIPITYEKLPHFCYGCGIIGHVLKDCESTEDPNEENLQYGS