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Moc06g28070 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g28070
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:21066362..21070030
RNA-Seq ExpressionMoc06g28070
SyntenyMoc06g28070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5516244.1 hypothetical protein RHGRI_037069 [Rhododendron griersonianum]3.3e-0734.17Show/hide
Query:  SGLWLRWTYHTSALGKESLRSRDGGPP--WWVDLRWPMVAEVSRRQENRP-----RIVADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIM
        S +WL   +    L K      + G    +WVD  W    E  + Q  RP     ++V D+I  G  WN P +       E   I +IPLP  + RD+++
Subjt:  SGLWLRWTYHTSALGKESLRSRDGGPP--WWVDLRWPMVAEVSRRQENRP-----RIVADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIM

Query:  LTHSKDGVFSIKSGYHVANS
          HSK+GV+S+KSGYH+A +
Subjt:  LTHSKDGVFSIKSGYHVANS

KAG5516246.1 hypothetical protein RHGRI_037069 [Rhododendron griersonianum]3.3e-0734.17Show/hide
Query:  SGLWLRWTYHTSALGKESLRSRDGGPP--WWVDLRWPMVAEVSRRQENRP-----RIVADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIM
        S +WL   +    L K      + G    +WVD  W    E  + Q  RP     ++V D+I  G  WN P +       E   I +IPLP  + RD+++
Subjt:  SGLWLRWTYHTSALGKESLRSRDGGPP--WWVDLRWPMVAEVSRRQENRP-----RIVADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIM

Query:  LTHSKDGVFSIKSGYHVANS
          HSK+GV+S+KSGYH+A +
Subjt:  LTHSKDGVFSIKSGYHVANS

KAG5516247.1 hypothetical protein RHGRI_037069 [Rhododendron griersonianum]3.3e-0734.17Show/hide
Query:  SGLWLRWTYHTSALGKESLRSRDGGPP--WWVDLRWPMVAEVSRRQENRP-----RIVADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIM
        S +WL   +    L K      + G    +WVD  W    E  + Q  RP     ++V D+I  G  WN P +       E   I +IPLP  + RD+++
Subjt:  SGLWLRWTYHTSALGKESLRSRDGGPP--WWVDLRWPMVAEVSRRQENRP-----RIVADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIM

Query:  LTHSKDGVFSIKSGYHVANS
          HSK+GV+S+KSGYH+A +
Subjt:  LTHSKDGVFSIKSGYHVANS

XP_028948114.1 uncharacterized protein LOC114820933 [Malus domestica]2.1e-0629.49Show/hide
Query:  RTCGRGNQSGLWLRWTYHTSALGKESLRSRDG--------GPPWWVDLRWPMVAEVSRRQENRPRIVADLIEPGGQ-WNEPLIPENFEGEEADKILRIPL
        R  G+G  +    +  +    + +  +R R G          PW+     P    V  R   +  +V+DLIEP  + W   +I + F  E+   IL IPL
Subjt:  RTCGRGNQSGLWLRWTYHTSALGKESLRSRDG--------GPPWWVDLRWPMVAEVSRRQENRPRIVADLIEPGGQ-WNEPLIPENFEGEEADKILRIPL

Query:  PRNDCRDQIMLTHSKDGVFSIKSGYHVANS--------RKPRPRQSETKNTEQEWK
         +  C D+++  H+ DG +S+K+GY VA S        +K R   S   NT Q WK
Subjt:  PRNDCRDQIMLTHSKDGVFSIKSGYHVANS--------RKPRPRQSETKNTEQEWK

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]1.5e-0741.98Show/hide
Query:  VADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHSKDGVFSIKSGYHVANSRKPRPRQSETKNTEQEWK
        V DL EP G W++  +   F   +AD IL +P    D  D+I+  +SKDG +S++SGY +A + K R  QS+T+ TE+ WK
Subjt:  VADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHSKDGVFSIKSGYHVANSRKPRPRQSETKNTEQEWK

TrEMBL top hitse value%identityAlignment
A0A2K3KY66 Ribonuclease H6.6e-0642.42Show/hide
Query:  RPRIVADLIEPG-GQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHSKDGVFSIKSGYHVA
        R  +V DLI P   QWN+ LI + F   EA++IL++PL   + +D+++ + +KDG++++KSGYH A
Subjt:  RPRIVADLIEPG-GQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHSKDGVFSIKSGYHVA

A0A5C7IST2 RNase H domain-containing protein3.9e-0648.53Show/hide
Query:  IVADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHSKDGVFSIKSGYHVANSRKPR
        +V+ LIE  G+WNE LI  NF  EEA+ IL IPL     RD  +   +KDG F++KS Y VA S   R
Subjt:  IVADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHSKDGVFSIKSGYHVANSRKPR

A0A6P9EBC5 uncharacterized protein LOC1183480202.3e-0636.76Show/hide
Query:  SGLWLRWTYHTSALGKESLRSR--DGGPPWWVDLRWPMVAEVSRRQENRPR-----IVADLIEPGGQ-WNEPLIPENFEGEEADKILRIPLPRNDCRDQI
        S +W R  + +  L KE LR R  DG        RW       R Q   P      +V DL+  G + WNE  I   F  EEAD I+ IPL + D  D++
Subjt:  SGLWLRWTYHTSALGKESLRSR--DGGPPWWVDLRWPMVAEVSRRQENRPR-----IVADLIEPGGQ-WNEPLIPENFEGEEADKILRIPLPRNDCRDQI

Query:  MLTHSKDGVFSIKSGYHVANSRKPRPRQSETKNTEQ
        +   SK G+FS+KS YH+  SR    R S+ +++EQ
Subjt:  MLTHSKDGVFSIKSGYHVANSRKPRPRQSETKNTEQ

A0A6P9EU11 uncharacterized protein LOC1183497083.9e-0631.62Show/hide
Query:  WLRWTYHTSALGKESLRSRDGGPPW---WVDLRWPMVAEVSRRQENRPRIVADLIEP---GGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHS
        W   T   S   +E L  R G       W D   P   + S +   R       +E     G WN  L+ + F  EEAD I  +P+  ++  D+ +   S
Subjt:  WLRWTYHTSALGKESLRSRDGGPPW---WVDLRWPMVAEVSRRQENRPRIVADLIEP---GGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHS

Query:  KDGVFSIKSGYHVANSRKPRPR--QSETKNTEQEWK
        KDG++S+KSGYH+  +RK R +   SE K  +  WK
Subjt:  KDGVFSIKSGYHVANSRKPRPR--QSETKNTEQEWK

A0A803P3X4 Uncharacterized protein6.0e-0738.27Show/hide
Query:  VADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHSKDGVFSIKSGYHVANSRKPRPRQSETKNTEQEWK
        V DL +  G+W+E  +   F   +AD ILR+P    D  D+++  +SKDG +S++SGY +A + + R  QS+T+ TE+ W+
Subjt:  VADLIEPGGQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHSKDGVFSIKSGYHVANSRKPRPRQSETKNTEQEWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGAGAAAGTTGTGGGATTCTTAGCTCAGGTCGGCACCATAAGGTCGCTCGCGGCTTATTGTTCTCGTCACGTGGCTTATGGGATGACCAATGTTAGCATGGGATT
TCTTCTTCTCCAAGTGGCCGACCGGACTTGTGGTCGAGGTAACCAATCTGGCTTGTGGCTGAGGTGGACCTACCACACGTCTGCCTTGGGCAAGGAGAGCTTGCGCAGCA
GGGATGGTGGACCTCCTTGGTGGGTTGACCTGAGATGGCCCATGGTTGCCGAAGTGAGTAGGAGGCAGGAAAATAGGCCGAGGATTGTGGCTGATCTAATCGAGCCTGGA
GGACAATGGAATGAGCCTCTGATCCCTGAAAATTTTGAGGGAGAGGAAGCTGACAAGATCCTTAGGATTCCCCTCCCTCGAAATGACTGTCGAGATCAGATTATGTTGAC
TCATTCTAAAGATGGTGTCTTCTCGATCAAGAGTGGTTATCATGTTGCAAATTCTAGGAAGCCTAGGCCAAGGCAGTCTGAGACTAAAAACACAGAGCAAGAGTGGAAGT
AG
mRNA sequenceShow/hide mRNA sequence
ATGTACGAGAAAGTTGTGGGATTCTTAGCTCAGGTCGGCACCATAAGGTCGCTCGCGGCTTATTGTTCTCGTCACGTGGCTTATGGGATGACCAATGTTAGCATGGGATT
TCTTCTTCTCCAAGTGGCCGACCGGACTTGTGGTCGAGGTAACCAATCTGGCTTGTGGCTGAGGTGGACCTACCACACGTCTGCCTTGGGCAAGGAGAGCTTGCGCAGCA
GGGATGGTGGACCTCCTTGGTGGGTTGACCTGAGATGGCCCATGGTTGCCGAAGTGAGTAGGAGGCAGGAAAATAGGCCGAGGATTGTGGCTGATCTAATCGAGCCTGGA
GGACAATGGAATGAGCCTCTGATCCCTGAAAATTTTGAGGGAGAGGAAGCTGACAAGATCCTTAGGATTCCCCTCCCTCGAAATGACTGTCGAGATCAGATTATGTTGAC
TCATTCTAAAGATGGTGTCTTCTCGATCAAGAGTGGTTATCATGTTGCAAATTCTAGGAAGCCTAGGCCAAGGCAGTCTGAGACTAAAAACACAGAGCAAGAGTGGAAGT
AG
Protein sequenceShow/hide protein sequence
MYEKVVGFLAQVGTIRSLAAYCSRHVAYGMTNVSMGFLLLQVADRTCGRGNQSGLWLRWTYHTSALGKESLRSRDGGPPWWVDLRWPMVAEVSRRQENRPRIVADLIEPG
GQWNEPLIPENFEGEEADKILRIPLPRNDCRDQIMLTHSKDGVFSIKSGYHVANSRKPRPRQSETKNTEQEWK