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Moc06g28140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g28140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111019515
Genome locationchr6:21114473..21115387
RNA-Seq ExpressionMoc06g28140
SyntenyMoc06g28140
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833181.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.8e-0427.19Show/hide
Query:  TELGFDLNLADVPNDWRETARDKEWRPLIQLIQCEALELVREFYAAVYPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGIKMLVTPTLEQLDEALEC
        TE+GF     ++P    +      WR   +  Q      V  FY     ++H+  V  + I F+  +IN  F++ NI  A G +++ TPT  ++++AL  
Subjt:  TELGFDLNLADVPNDWRETARDKEWRPLIQLIQCEALELVREFYAAVYPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGIKMLVTPTLEQLDEALEC

Query:  VGKPSATWDLTTHG
        + KP + W+ +  G
Subjt:  VGKPSATWDLTTHG
XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]1.1e-3889.25Show/hide
Query:  MTELGFDLNLADVPNDWRETARDKEWRPLIQLIQCEALELVREFYAAVYPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGIKMLVTPTLE
        MTELGFDL L DVP+DWR+TAR KEWRPLIQ IQCEALELVREFYAA +PQSHIAIVRGKEIRFDATQINYTFNIKNI+DAVG KMLVTPTLE
Subjt:  MTELGFDLNLADVPNDWRETARDKEWRPLIQLIQCEALELVREFYAAVYPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGIKMLVTPTLE
TrEMBL top hitse value%identityAlignment
A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195155.4e-3989.25Show/hide
Query:  MTELGFDLNLADVPNDWRETARDKEWRPLIQLIQCEALELVREFYAAVYPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGIKMLVTPTLE
        MTELGFDL L DVP+DWR+TAR KEWRPLIQ IQCEALELVREFYAA +PQSHIAIVRGKEIRFDATQINYTFNIKNI+DAVG KMLVTPTLE
Subjt:  MTELGFDLNLADVPNDWRETARDKEWRPLIQLIQCEALELVREFYAAVYPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGIKMLVTPTLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAATTGGGATTCGACCTCAATCTAGCAGATGTGCCTAACGATTGGAGGGAGACCGCTAGAGATAAAGAATGGAGACCACTCATTCAGCTCATACAATGTGAGGC
TTTGGAGTTAGTCAGAGAGTTCTACGCTGCTGTCTATCCCCAGTCACATATCGCCATAGTGCGTGGGAAGGAAATAAGATTTGATGCCACTCAGATCAACTACACCTTCA
ACATTAAGAATATCAGAGATGCTGTGGGCATTAAGATGTTAGTGACTCCGACTCTAGAACAGCTTGATGAGGCTCTAGAATGTGTTGGGAAGCCCTCTGCCACTTGGGAT
TTGACTACTCATGGCAAGCTCCCTGAGGATCAAATTAAGAGAGATGCCCCAGTTGTGGAAGAGAAGAATATTCGGAGAATTATCGCCCATGCGCTACAAAGAAGGGAAGG
TACTGGGACGTCTCCTACATCGGAGATTCGTCGTCTCCGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTGAGGGATTCAT
TAGATTTTGCGGTTTTACCTTCATGGCCTCCAACGCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACCGACACTGATCCTAGTCCACAACCTCCAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAATTGGGATTCGACCTCAATCTAGCAGATGTGCCTAACGATTGGAGGGAGACCGCTAGAGATAAAGAATGGAGACCACTCATTCAGCTCATACAATGTGAGGC
TTTGGAGTTAGTCAGAGAGTTCTACGCTGCTGTCTATCCCCAGTCACATATCGCCATAGTGCGTGGGAAGGAAATAAGATTTGATGCCACTCAGATCAACTACACCTTCA
ACATTAAGAATATCAGAGATGCTGTGGGCATTAAGATGTTAGTGACTCCGACTCTAGAACAGCTTGATGAGGCTCTAGAATGTGTTGGGAAGCCCTCTGCCACTTGGGAT
TTGACTACTCATGGCAAGCTCCCTGAGGATCAAATTAAGAGAGATGCCCCAGTTGTGGAAGAGAAGAATATTCGGAGAATTATCGCCCATGCGCTACAAAGAAGGGAAGG
TACTGGGACGTCTCCTACATCGGAGATTCGTCGTCTCCGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTGAGGGATTCAT
TAGATTTTGCGGTTTTACCTTCATGGCCTCCAACGCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACCGACACTGATCCTAGTCCACAACCTCCAACTTCATGA
Protein sequenceShow/hide protein sequence
MTELGFDLNLADVPNDWRETARDKEWRPLIQLIQCEALELVREFYAAVYPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGIKMLVTPTLEQLDEALECVGKPSATWD
LTTHGKLPEDQIKRDAPVVEEKNIRRIIAHALQRREGTGTSPTSEIRRLREENQQLRDQVREVVQHIYNLRDSLDFAVLPSWPPTLAAILGHPSSSTDTDPSPQPPTS