; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g28230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g28230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:21188260..21192115
RNA-Seq ExpressionMoc06g28230
SyntenyMoc06g28230
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150861.1 uncharacterized protein LOC111018906 [Momordica charantia]2.8e-8079.1Show/hide
Query:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT
        GVHLPHNDALVIAPLIDH LVRRVL+DGGAS NILSL TYLALGWTRSQLKKSPTPLVGF GE VSPEGC++LPV IGQD T V QMAEFVVI GRSAY 
Subjt:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT

Query:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQGDLP-------REVKTQFSPPIEELELVPLLSPEKQIG
        AIFGRPIIHSFRAV STLHQ LKYSTPNGVGTVRGEQKTSRECYASALKGSSV  LEEQ +  +LP       +  K +FS P E+LELVPLLSP++Q+ 
Subjt:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQGDLP-------REVKTQFSPPIEELELVPLLSPEKQIG

Query:  L
        L
Subjt:  L

XP_022152110.1 uncharacterized protein LOC111019899 [Momordica charantia]9.6e-8178.11Show/hide
Query:  VHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYTA
        VHLPHNDALVIAPLIDH +VRRVL+DGGASANILSLPTYLALGWTRSQLKKSPTPLVGF GESV PEGC++LPVT+GQD T V QMAEFVV+DGRSAY A
Subjt:  VHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYTA

Query:  IFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTN-------QGDLPREVKTQFSPPIEELELVPLLSPEKQIGL
        IFGRPIIHSFRA+PSTLHQ LKYSTPNGVGTVRGEQ  SRECYAS LKG+SVC LE  T+       + DLP     +F+ P EELELVPLLS EKQ+ L
Subjt:  IFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTN-------QGDLPREVKTQFSPPIEELELVPLLSPEKQIGL

Query:  G
        G
Subjt:  G

XP_022152367.1 uncharacterized protein LOC111020111 [Momordica charantia]9.5e-8987.5Show/hide
Query:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT
        GVHLPHNDALVIAPLID  LVRRVL+DGGASANILSLPTYLALGWTRSQLKKSPTPLVGF GESVSPEGC++LPVT+GQDAT V QMAEFVVIDGR AY 
Subjt:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT

Query:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQGDLPREVKTQFSPPIEELELVPLLSPEKQI
        AIFGRPIIHSFRAVPSTLHQ LKYSTPNGVGTVRGEQKTSRECYAS LKGSSVCVLEEQ NQ D PRE K QFSP +EELELVPLLSP + +
Subjt:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQGDLPREVKTQFSPPIEELELVPLLSPEKQI

XP_022154846.1 uncharacterized protein LOC111022006 [Momordica charantia]9.9e-8680.98Show/hide
Query:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT
        GVHLPHNDALVIAPLIDH LVRRVLIDGGASANI SLPTYLALGWTRSQLKKSPTPLVGF GESVSPEGC++L VTIGQDAT V QMAEFVVID +SAY 
Subjt:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT

Query:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQG-------DLPREVKTQFSPPIEELELVPLLSPEKQIG
        AIFGRPIIHSF AV STLHQ LKYST NGVGTVRGEQKTSR+CYAS LKG +VC LEEQTN+G       DLP++ K QFSPP EELELVPLLSPEK + 
Subjt:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQG-------DLPREVKTQFSPPIEELELVPLLSPEKQIG

Query:  LGRDL
        +G  L
Subjt:  LGRDL

XP_022157676.1 uncharacterized protein LOC111024332 [Momordica charantia]2.4e-7978.46Show/hide
Query:  VHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYTA
        VHLPHNDALVIAPLIDH +VRRVL+DGGASANILSLPTYLALGWTRSQLK+SPTPLVGF GESV PEGC++LPVT+GQD T V QM EFVV+DGRS Y A
Subjt:  VHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYTA

Query:  IFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTN-----QGDLPREVKTQFSPPIEELELVPLLSPEKQ
        IFGRPIIHSFR +PSTLHQ LKYSTPNGVGTVRGEQ  SRECYA+ALKGSSVC LE   +     + DLPR+   +F+ P EELELVPLLSPEKQ
Subjt:  IFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTN-----QGDLPREVKTQFSPPIEELELVPLLSPEKQ

TrEMBL top hitse value%identityAlignment
A0A6J1DCR3 uncharacterized protein LOC1110189061.3e-8079.1Show/hide
Query:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT
        GVHLPHNDALVIAPLIDH LVRRVL+DGGAS NILSL TYLALGWTRSQLKKSPTPLVGF GE VSPEGC++LPV IGQD T V QMAEFVVI GRSAY 
Subjt:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT

Query:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQGDLP-------REVKTQFSPPIEELELVPLLSPEKQIG
        AIFGRPIIHSFRAV STLHQ LKYSTPNGVGTVRGEQKTSRECYASALKGSSV  LEEQ +  +LP       +  K +FS P E+LELVPLLSP++Q+ 
Subjt:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQGDLP-------REVKTQFSPPIEELELVPLLSPEKQIG

Query:  L
        L
Subjt:  L

A0A6J1DD03 uncharacterized protein LOC1110198994.6e-8178.11Show/hide
Query:  VHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYTA
        VHLPHNDALVIAPLIDH +VRRVL+DGGASANILSLPTYLALGWTRSQLKKSPTPLVGF GESV PEGC++LPVT+GQD T V QMAEFVV+DGRSAY A
Subjt:  VHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYTA

Query:  IFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTN-------QGDLPREVKTQFSPPIEELELVPLLSPEKQIGL
        IFGRPIIHSFRA+PSTLHQ LKYSTPNGVGTVRGEQ  SRECYAS LKG+SVC LE  T+       + DLP     +F+ P EELELVPLLS EKQ+ L
Subjt:  IFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTN-------QGDLPREVKTQFSPPIEELELVPLLSPEKQIGL

Query:  G
        G
Subjt:  G

A0A6J1DG07 uncharacterized protein LOC1110201114.6e-8987.5Show/hide
Query:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT
        GVHLPHNDALVIAPLID  LVRRVL+DGGASANILSLPTYLALGWTRSQLKKSPTPLVGF GESVSPEGC++LPVT+GQDAT V QMAEFVVIDGR AY 
Subjt:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT

Query:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQGDLPREVKTQFSPPIEELELVPLLSPEKQI
        AIFGRPIIHSFRAVPSTLHQ LKYSTPNGVGTVRGEQKTSRECYAS LKGSSVCVLEEQ NQ D PRE K QFSP +EELELVPLLSP + +
Subjt:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQGDLPREVKTQFSPPIEELELVPLLSPEKQI

A0A6J1DPX9 uncharacterized protein LOC1110220064.8e-8680.98Show/hide
Query:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT
        GVHLPHNDALVIAPLIDH LVRRVLIDGGASANI SLPTYLALGWTRSQLKKSPTPLVGF GESVSPEGC++L VTIGQDAT V QMAEFVVID +SAY 
Subjt:  GVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYT

Query:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQG-------DLPREVKTQFSPPIEELELVPLLSPEKQIG
        AIFGRPIIHSF AV STLHQ LKYST NGVGTVRGEQKTSR+CYAS LKG +VC LEEQTN+G       DLP++ K QFSPP EELELVPLLSPEK + 
Subjt:  AIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTNQG-------DLPREVKTQFSPPIEELELVPLLSPEKQIG

Query:  LGRDL
        +G  L
Subjt:  LGRDL

A0A6J1DYW5 uncharacterized protein LOC1110243321.1e-7978.46Show/hide
Query:  VHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYTA
        VHLPHNDALVIAPLIDH +VRRVL+DGGASANILSLPTYLALGWTRSQLK+SPTPLVGF GESV PEGC++LPVT+GQD T V QM EFVV+DGRS Y A
Subjt:  VHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYTA

Query:  IFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTN-----QGDLPREVKTQFSPPIEELELVPLLSPEKQ
        IFGRPIIHSFR +PSTLHQ LKYSTPNGVGTVRGEQ  SRECYA+ALKGSSVC LE   +     + DLPR+   +F+ P EELELVPLLSPEKQ
Subjt:  IFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLEEQTN-----QGDLPREVKTQFSPPIEELELVPLLSPEKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGACCTGCGGTCATCAACACTATTTTCGGAGGTTCGAGCGGGGGCCAGTCCGGAAACAAGAGGAAGAGCTAGCTTGCTAGGCCAGGCGCGAAGTATGCAT
CATCAAGGAGTAGAAACCTACTTGCTCCGTCACTTTCGACGATGCCGATCTGGGGGGGTCCATTTGCCCCATAATGACGCACTCGTGATTGCCCCTCTCATTGAT
CACTTCTTGGTCCGAAGGGTACTGATTGATGGAGGCGCATCTGCCAACATCTTGTCCCTCCCAACATATCTAGCATTGGGATGGACCAGGTCACAATTGAAGAAA
AGTCCAACACCCTTAGTTGGATTCTTTGGAGAATCGGTCTCCCCAGAAGGGTGTGTTAACTTGCCGGTCACGATCGGGCAGGATGCTACCCATGTCATACAAATG
GCTGAGTTCGTGGTGATCGATGGCAGGTCGGCCTATACCGCCATCTTCGGGAGACCCATCATCCACTCATTCCGGGCCGTCCCCTCCACACTGCATCAAGCCCTG
AAGTACTCAACCCCTAATGGAGTGGGCACGGTCCGAGGTGAGCAAAAGACTTCAAGGGAGTGTTATGCATCCGCGCTTAAAGGGTCATCAGTATGTGTCCTAGAG
GAACAGACCAATCAAGGCGACCTGCCTAGGGAAGTCAAAACGCAGTTCTCTCCACCGATAGAGGAGCTCGAGCTTGTTCCCTTACTTAGCCCCGAAAAACAAATC
GGTCTCGGTCGAGATCTTGGACACTCCTTCAATCTTGAGCCAGATGTGATGGAGGTTGATACTCTATCACCCTCTTGGATGGACCCAATCGTGGAGTTCATCAAA
GGAAGTCCACCGCAAGATCCGAAGCAGCAAAAGAAGATGGCCCGGAGGGCAGCTCGGTTCACAGTTCGGGAAGGAGCGTTGGAAAAGGGAAATGGCCCAGCTGCG
TTTAGCAGAATGGCCAGACATTACAATGCCCGAGTTCGACCTCGAAGCTTCCAAGTTGGACATTTGGTCTTGAGGAGAATTCAAAGTCATGTGAGCACCCTTGAC
CCAAGTTGGGAGGGACCGTTCGAGGTTAAAGGCATAGTCCGACCTGGAACGTATATGTTGGCCGACCTTGAAGGAAGAGTGCTTGCGCATCCATGGAACGTGGAG
CACTTGAAGCGCTATTACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGACCTGCGGTCATCAACACTATTTTCGGAGGTTCGAGCGGGGGCCAGTCCGGAAACAAGAGGAAGAGCTAGCTTGCTAGGCCAGGCGCGAAGTATGCAT
CATCAAGGAGTAGAAACCTACTTGCTCCGTCACTTTCGACGATGCCGATCTGGGGGGGTCCATTTGCCCCATAATGACGCACTCGTGATTGCCCCTCTCATTGAT
CACTTCTTGGTCCGAAGGGTACTGATTGATGGAGGCGCATCTGCCAACATCTTGTCCCTCCCAACATATCTAGCATTGGGATGGACCAGGTCACAATTGAAGAAA
AGTCCAACACCCTTAGTTGGATTCTTTGGAGAATCGGTCTCCCCAGAAGGGTGTGTTAACTTGCCGGTCACGATCGGGCAGGATGCTACCCATGTCATACAAATG
GCTGAGTTCGTGGTGATCGATGGCAGGTCGGCCTATACCGCCATCTTCGGGAGACCCATCATCCACTCATTCCGGGCCGTCCCCTCCACACTGCATCAAGCCCTG
AAGTACTCAACCCCTAATGGAGTGGGCACGGTCCGAGGTGAGCAAAAGACTTCAAGGGAGTGTTATGCATCCGCGCTTAAAGGGTCATCAGTATGTGTCCTAGAG
GAACAGACCAATCAAGGCGACCTGCCTAGGGAAGTCAAAACGCAGTTCTCTCCACCGATAGAGGAGCTCGAGCTTGTTCCCTTACTTAGCCCCGAAAAACAAATC
GGTCTCGGTCGAGATCTTGGACACTCCTTCAATCTTGAGCCAGATGTGATGGAGGTTGATACTCTATCACCCTCTTGGATGGACCCAATCGTGGAGTTCATCAAA
GGAAGTCCACCGCAAGATCCGAAGCAGCAAAAGAAGATGGCCCGGAGGGCAGCTCGGTTCACAGTTCGGGAAGGAGCGTTGGAAAAGGGAAATGGCCCAGCTGCG
TTTAGCAGAATGGCCAGACATTACAATGCCCGAGTTCGACCTCGAAGCTTCCAAGTTGGACATTTGGTCTTGAGGAGAATTCAAAGTCATGTGAGCACCCTTGAC
CCAAGTTGGGAGGGACCGTTCGAGGTTAAAGGCATAGTCCGACCTGGAACGTATATGTTGGCCGACCTTGAAGGAAGAGTGCTTGCGCATCCATGGAACGTGGAG
CACTTGAAGCGCTATTACCCTTGA
Protein sequenceShow/hide protein sequence
MTDLRSSTLFSEVRAGASPETRGRASLLGQARSMHHQGVETYLLRHFRRCRSGGVHLPHNDALVIAPLIDHFLVRRVLIDGGASANILSLPTYLALGWTRSQLKK
SPTPLVGFFGESVSPEGCVNLPVTIGQDATHVIQMAEFVVIDGRSAYTAIFGRPIIHSFRAVPSTLHQALKYSTPNGVGTVRGEQKTSRECYASALKGSSVCVLE
EQTNQGDLPREVKTQFSPPIEELELVPLLSPEKQIGLGRDLGHSFNLEPDVMEVDTLSPSWMDPIVEFIKGSPPQDPKQQKKMARRAARFTVREGALEKGNGPAA
FSRMARHYNARVRPRSFQVGHLVLRRIQSHVSTLDPSWEGPFEVKGIVRPGTYMLADLEGRVLAHPWNVEHLKRYYP