; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g28310 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g28310
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr6:21237846..21239647
RNA-Seq ExpressionMoc06g28310
SyntenyMoc06g28310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017233063.1 PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus]4.9e-3636.7Show/hide
Query:  MPAQMTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGG---
        M AQ+  M  MLK L+M        S +    S + Q  ++S V+CG+ H Y++CP+N  SVFY+G   Q    PY NTYN  WR HPNFS SNQG    
Subjt:  MPAQMTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGG---

Query:  ----------------QGSSNASLEAMMKEYMTRND--------------AAMRSLEMQVGQITNDLKSRPQGTLPGHIE--------------------
                        Q   + SLE M+KEY+ +N+              A++R+LE QVGQ+ N+L++RP GTLP   E                    
Subjt:  ----------------QGSSNASLEAMMKEYMTRND--------------AAMRSLEMQVGQITNDLKSRPQGTLPGHIE--------------------

Query:  ------NLKRDRKVTPVPASTSTPQPKE----KTEPVSSEEKG---------KKGDKGKQVVPCN-----TPQLHINIPHIDALEQMPNYTKFLKDIIYR
              + K D  V P   +   P  KE    K  P  S +K          ++  K KQ V          QLHINIP ++ALEQMPNY KF+KDI+ +
Subjt:  ------NLKRDRKVTPVPASTSTPQPKE----KTEPVSSEEKG---------KKGDKGKQVVPCN-----TPQLHINIPHIDALEQMPNYTKFLKDIIYR

Query:  RKKLGEHETVALTKCSSDTLGNPLPVK
        +++LGE ETVALTK  S  L + LP K
Subjt:  RKKLGEHETVALTKCSSDTLGNPLPVK

XP_022158314.1 uncharacterized protein LOC111024824 [Momordica charantia]1.5e-4556.65Show/hide
Query:  MPAQMTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQG----
        M AQM  +NQMLKQLTMEK++KTATS A+LEPS  LQISDIS VYCGDN LYENCPAN  SVFYVGQ AQRNFNPY NTY+P WR+HPNFS SNQG    
Subjt:  MPAQMTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQG----

Query:  --------------------------------------GQGSSNASLEAMMKEYMTRN-----------DAAMRSLEMQVGQITNDLKSRPQGTLPGHIE
                                               QG SN SLEAM KE+MTR+           D  +R LEMQVGQI ND KSRPQGTLPG+ E
Subjt:  --------------------------------------GQGSSNASLEAMMKEYMTRN-----------DAAMRSLEMQVGQITNDLKSRPQGTLPGHIE

Query:  NLK
        N K
Subjt:  NLK

XP_022159235.1 uncharacterized protein LOC111025653 [Momordica charantia]3.6e-3935.07Show/hide
Query:  MPAQMTVMNQMLKQLTMEKKSKTATSA-AILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQG
        M  Q+  + QMLK   MEK +  A SA A   PS V QI++ +  YCGD H  ENCP+N +S++YVGQ  Q+ FNPY NTYNPGW+ HPNFS S   GQG
Subjt:  MPAQMTVMNQMLKQLTMEKKSKTATSA-AILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQG

Query:  SSN--------------------------------------------ASLEAMMKE----------------------------YMTRNDAAMRSLEMQV
        SSN                                            +++E +MKE                            YM RND  +R LEMQ+
Subjt:  SSN--------------------------------------------ASLEAMMKE----------------------------YMTRNDAAMRSLEMQV

Query:  GQITNDLKSRPQGTLPGHIENLKRDRK------VTPVPASTSTPQPKEKTEPVSSEEKGKKGDKGKQVVPCNT---------------------------
        GQ+ N++++RPQG+LP   E  +R  K       T        P+  +++    S EK  +    K V P  +                           
Subjt:  GQITNDLKSRPQGTLPGHIENLKRDRK------VTPVPASTSTPQPKEKTEPVSSEEKGKKGDKGKQVVPCNT---------------------------

Query:  ---------PQLHINIPHIDALEQMPNYTKFLKDIIYRRKKLGEHETVALTKCSSDTLGNPLPVK
                  QLHINIP ++ALEQMP Y KF+KDII R+KKLGE+ETVALT+CSS+   + +P K
Subjt:  ---------PQLHINIPHIDALEQMPNYTKFLKDIIYRRKKLGEHETVALTKCSSDTLGNPLPVK

XP_030487620.1 uncharacterized protein LOC115704559 [Cannabis sativa]2.4e-3840.15Show/hide
Query:  MPAQMTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVG-QGAQRNFNPYLNTYNPGWRHHPNFSCSNQGG--
        + AQM  M  +LK + M            ++P+  +Q ++IS VYCGD H +ENCP+N ASV YVG Q   RN NPY N+YNPGW+HHPNFS   QG   
Subjt:  MPAQMTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVG-QGAQRNFNPYLNTYNPGWRHHPNFSCSNQGG--

Query:  ------------------------QGSSNASLEAMMKEYMTRND-------AAMRSLEMQVGQITNDLKSRPQGTLPGHIENLKRDRKVTPVPASTSTPQ
                                QGS  +SLE++M++YM +ND       A++R+LE+Q+GQ+ NDLK+RPQGTLP   EN +RD K      S     
Subjt:  ------------------------QGSSNASLEAMMKEYMTRND-------AAMRSLEMQVGQITNDLKSRPQGTLPGHIENLKRDRKVTPVPASTSTPQ

Query:  PKEKTEPVSSEEKGKKGDKGKQVVPCNTPQLHINIPHIDALEQMPNYTKFLKDIIYRRKKLGEHETVAL
         K      S+ ++  +    ++ +     +LHINIP ++ALEQMP Y KFLKDI+ ++  L   + VAL
Subjt:  PKEKTEPVSSEEKGKKGDKGKQVVPCNTPQLHINIPHIDALEQMPNYTKFLKDIIYRRKKLGEHETVAL

XP_030509134.1 uncharacterized protein LOC115723804 [Cannabis sativa]2.1e-3936.83Show/hide
Query:  MTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVG-QGAQRNFNPYLNTYNPGWRHHPNFSCSNQGG------
        M  M  +LK + M            ++P+T +Q ++IS VYCGD   +EN P+N ASV YVG Q   RN NPY N+YNP W+HHPNFS   QG       
Subjt:  MTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVG-QGAQRNFNPYLNTYNPGWRHHPNFSCSNQGG------

Query:  ------------------------QGSSNASLEAMMKEYMTRND-------AAMRSLEMQVGQITNDLKSRPQGTLPGHIENLKRDRK------------
                                QGS  +SLE++M++YM +ND       A++R+LE+Q+GQ+ NDLK+RPQGTLP   +N +RD K            
Subjt:  ------------------------QGSSNASLEAMMKEYMTRND-------AAMRSLEMQVGQITNDLKSRPQGTLPGHIENLKRDRK------------

Query:  -VTPVPASTSTPQP----------KEKTE------PVSSEEKGK-KGDKGKQVVPCNTP--------------------QLHINIPHIDALEQMPNYTKF
         +    A+T + +P          K +T       P SSE+  +   +K  Q  P   P                    QLHINIP ++ALEQMP Y KF
Subjt:  -VTPVPASTSTPQP----------KEKTE------PVSSEEKGK-KGDKGKQVVPCNTP--------------------QLHINIPHIDALEQMPNYTKF

Query:  LKDIIYRRKKLGEHETVALTKCSSDTLGNPLPVK
        LKDI+ ++++LGE ETVALT+  S  L + +P K
Subjt:  LKDIIYRRKKLGEHETVALTKCSSDTLGNPLPVK

TrEMBL top hitse value%identityAlignment
A0A2G9FWY3 Reverse transcriptase3.6e-3238.05Show/hide
Query:  CGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQGSS------------------NASLEAMMKEYMTRNDAAMRSLEMQV
        CG++H  + CP +  S+ +V    +   NPY NTYNPGWR HPNFS +N  GQGS+                    SLE  + ++M    A  ++++ Q+
Subjt:  CGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQGSS------------------NASLEAMMKEYMTRNDAAMRSLEMQV

Query:  GQITNDLKSRPQGTLPGHIE-NLKRDRKV--TPVPASTSTPQPKEKTEPVSSEEKGKKGDKGKQVVPCNTPQLHINIPHIDALEQMPNYTKFLKDIIYRR
        GQ+ N + SRPQG+LP + E N ++D K     V         +   EP  S+EK    ++  + V     +LHINIP  +ALEQMP+Y KF+KDI+ ++
Subjt:  GQITNDLKSRPQGTLPGHIE-NLKRDRKV--TPVPASTSTPQPKEKTEPVSSEEKGKKGDKGKQVVPCNTPQLHINIPHIDALEQMPNYTKFLKDIIYRR

Query:  KKLGEHETVALTKCSSDTLGNPLPVK
        + LG++ETVALT+  S  + N LP K
Subjt:  KKLGEHETVALTKCSSDTLGNPLPVK

A0A2G9G6G2 Reverse transcriptase1.0e-3136.32Show/hide
Query:  LQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQGSS------------------NASLEAMMKEYMTRND
        +Q + ++   CG+ H  + CP +  S+ +V    +   NPY NTYNPGWR HPNFS +N  GQGS+                    SLE  + ++M    
Subjt:  LQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQGSS------------------NASLEAMMKEYMTRND

Query:  AAMRSLEMQVGQITNDLKSRPQGTLPGHIE-NLKRDRKVTPVPASTSTPQPKEKTEPVSSEEKGKKGDKGKQVVPCNTPQLHINIPHIDALEQMPNYTKF
        A  +++E Q+GQ+ N + SRPQG+LP + E N ++D     V         +   EP  S+EK    ++ ++ V     +LHINIP  +ALEQMP+Y KF
Subjt:  AAMRSLEMQVGQITNDLKSRPQGTLPGHIE-NLKRDRKVTPVPASTSTPQPKEKTEPVSSEEKGKKGDKGKQVVPCNTPQLHINIPHIDALEQMPNYTKF

Query:  LKDIIYRRKKLGEHETVALTKCSSDTLGNPLPVK
        +KDI+ ++++LG++E V LT+  S  + N LP K
Subjt:  LKDIIYRRKKLGEHETVALTKCSSDTLGNPLPVK

A0A2G9H4Y0 Reverse transcriptase3.0e-3136.02Show/hide
Query:  LQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQGSS------------------NASLEAMMKEYMTRND
        LQ + ++   CG+ H  + CP +  S+ +V    +   NPY NTYNPGWR HPNFS +N   QGS+                    SLE  + ++M    
Subjt:  LQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQGSS------------------NASLEAMMKEYMTRND

Query:  AAMRSLEMQVGQITNDLKSRPQGTLPGHIE-NLKRDRKVTPVPASTSTPQPKEKT--EPVSSEEKGKKGDKGKQVVPCNTPQLHINIPHIDALEQMPNYT
        A  +++E Q+GQ+ N + SRPQG+L  + E N ++D K      +    +  ++   EP  S+EK    +K ++ V     +LHINIP  +ALEQMP+Y 
Subjt:  AAMRSLEMQVGQITNDLKSRPQGTLPGHIE-NLKRDRKVTPVPASTSTPQPKEKT--EPVSSEEKGKKGDKGKQVVPCNTPQLHINIPHIDALEQMPNYT

Query:  KFLKDIIYRRKKLGEHETVALTKCSSDTLGNPLPVK
        KF+KDI+ +++++G+++TVALT+  S  + N LP K
Subjt:  KFLKDIIYRRKKLGEHETVALTKCSSDTLGNPLPVK

A0A6J1DY39 uncharacterized protein LOC1110256531.8e-3935.07Show/hide
Query:  MPAQMTVMNQMLKQLTMEKKSKTATSA-AILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQG
        M  Q+  + QMLK   MEK +  A SA A   PS V QI++ +  YCGD H  ENCP+N +S++YVGQ  Q+ FNPY NTYNPGW+ HPNFS S   GQG
Subjt:  MPAQMTVMNQMLKQLTMEKKSKTATSA-AILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQG

Query:  SSN--------------------------------------------ASLEAMMKE----------------------------YMTRNDAAMRSLEMQV
        SSN                                            +++E +MKE                            YM RND  +R LEMQ+
Subjt:  SSN--------------------------------------------ASLEAMMKE----------------------------YMTRNDAAMRSLEMQV

Query:  GQITNDLKSRPQGTLPGHIENLKRDRK------VTPVPASTSTPQPKEKTEPVSSEEKGKKGDKGKQVVPCNT---------------------------
        GQ+ N++++RPQG+LP   E  +R  K       T        P+  +++    S EK  +    K V P  +                           
Subjt:  GQITNDLKSRPQGTLPGHIENLKRDRK------VTPVPASTSTPQPKEKTEPVSSEEKGKKGDKGKQVVPCNT---------------------------

Query:  ---------PQLHINIPHIDALEQMPNYTKFLKDIIYRRKKLGEHETVALTKCSSDTLGNPLPVK
                  QLHINIP ++ALEQMP Y KF+KDII R+KKLGE+ETVALT+CSS+   + +P K
Subjt:  ---------PQLHINIPHIDALEQMPNYTKFLKDIIYRRKKLGEHETVALTKCSSDTLGNPLPVK

A0A6J1DZ19 uncharacterized protein LOC1110248247.4e-4656.65Show/hide
Query:  MPAQMTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQG----
        M AQM  +NQMLKQLTMEK++KTATS A+LEPS  LQISDIS VYCGDN LYENCPAN  SVFYVGQ AQRNFNPY NTY+P WR+HPNFS SNQG    
Subjt:  MPAQMTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQG----

Query:  --------------------------------------GQGSSNASLEAMMKEYMTRN-----------DAAMRSLEMQVGQITNDLKSRPQGTLPGHIE
                                               QG SN SLEAM KE+MTR+           D  +R LEMQVGQI ND KSRPQGTLPG+ E
Subjt:  --------------------------------------GQGSSNASLEAMMKEYMTRN-----------DAAMRSLEMQVGQITNDLKSRPQGTLPGHIE

Query:  NLK
        N K
Subjt:  NLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGCCCAGATGACGGTTATGAACCAGATGTTAAAACAGCTGACAATGGAGAAGAAATCCAAAACCGCCACTTCAGCGGCTATCCTTGAACCCTCTACTGTTTTACA
AATTTCAGATATATCTTATGTTTATTGTGGTGATAACCACTTGTATGAGAACTGTCCAGCTAATACAGCGTCTGTTTTCTATGTAGGTCAAGGTGCCCAGCGTAATTTCA
ATCCATATTTAAATACTTACAACCCTGGTTGGAGGCACCATCCAAACTTCTCTTGCAGTAACCAAGGAGGACAAGGTAGTAGCAATGCAAGTTTGGAGGCCATGATGAAG
GAATACATGACGAGGAATGATGCTGCGATGAGAAGCTTGGAGATGCAAGTGGGGCAGATAACAAATGACCTAAAATCTAGACCACAAGGTACATTGCCAGGACACATAGA
GAATCTGAAACGAGATCGTAAAGTTACACCTGTCCCTGCATCCACCTCCACTCCACAACCAAAAGAGAAAACAGAACCCGTAAGTTCAGAAGAGAAAGGTAAGAAGGGCG
ACAAAGGTAAGCAAGTAGTGCCTTGCAATACTCCACAGTTGCATATAAATATACCTCACATAGATGCCTTAGAACAAATGCCTAACTACACCAAGTTTTTGAAAGATATA
ATTTATAGGCGTAAGAAGTTAGGAGAGCATGAGACGGTAGCCCTAACAAAGTGCAGTAGTGATACTCTAGGGAATCCATTGCCTGTTAAGTTCACTTTCAACGTCCTTGA
TGCGATGCTTCTCCCGGATGAAGTCGAGGACTGCTCTGCAATAGGGGCAATCATAGAGGAACTTCAGGTGATGATTGTAGAAGTCTTAGAAGCAGATTTGGAGGTCGTAG
AAAAGGAAGCGAAAATTGCGTCTGGTGTAATTTTGCCACAATTTGAGCACGTCGAGTTGTTGCAGCCGACAATAGCCGATTTGAAAGCCTTGAAACATTCCATCATTAAA
CCTCCAGAATTGGAGAAGAAACCCCTAACTTCTCATTTAAAATATGCTTATTTAAGTTTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGCCCAGATGACGGTTATGAACCAGATGTTAAAACAGCTGACAATGGAGAAGAAATCCAAAACCGCCACTTCAGCGGCTATCCTTGAACCCTCTACTGTTTTACA
AATTTCAGATATATCTTATGTTTATTGTGGTGATAACCACTTGTATGAGAACTGTCCAGCTAATACAGCGTCTGTTTTCTATGTAGGTCAAGGTGCCCAGCGTAATTTCA
ATCCATATTTAAATACTTACAACCCTGGTTGGAGGCACCATCCAAACTTCTCTTGCAGTAACCAAGGAGGACAAGGTAGTAGCAATGCAAGTTTGGAGGCCATGATGAAG
GAATACATGACGAGGAATGATGCTGCGATGAGAAGCTTGGAGATGCAAGTGGGGCAGATAACAAATGACCTAAAATCTAGACCACAAGGTACATTGCCAGGACACATAGA
GAATCTGAAACGAGATCGTAAAGTTACACCTGTCCCTGCATCCACCTCCACTCCACAACCAAAAGAGAAAACAGAACCCGTAAGTTCAGAAGAGAAAGGTAAGAAGGGCG
ACAAAGGTAAGCAAGTAGTGCCTTGCAATACTCCACAGTTGCATATAAATATACCTCACATAGATGCCTTAGAACAAATGCCTAACTACACCAAGTTTTTGAAAGATATA
ATTTATAGGCGTAAGAAGTTAGGAGAGCATGAGACGGTAGCCCTAACAAAGTGCAGTAGTGATACTCTAGGGAATCCATTGCCTGTTAAGTTCACTTTCAACGTCCTTGA
TGCGATGCTTCTCCCGGATGAAGTCGAGGACTGCTCTGCAATAGGGGCAATCATAGAGGAACTTCAGGTGATGATTGTAGAAGTCTTAGAAGCAGATTTGGAGGTCGTAG
AAAAGGAAGCGAAAATTGCGTCTGGTGTAATTTTGCCACAATTTGAGCACGTCGAGTTGTTGCAGCCGACAATAGCCGATTTGAAAGCCTTGAAACATTCCATCATTAAA
CCTCCAGAATTGGAGAAGAAACCCCTAACTTCTCATTTAAAATATGCTTATTTAAGTTTTTTCTAA
Protein sequenceShow/hide protein sequence
MPAQMTVMNQMLKQLTMEKKSKTATSAAILEPSTVLQISDISYVYCGDNHLYENCPANTASVFYVGQGAQRNFNPYLNTYNPGWRHHPNFSCSNQGGQGSSNASLEAMMK
EYMTRNDAAMRSLEMQVGQITNDLKSRPQGTLPGHIENLKRDRKVTPVPASTSTPQPKEKTEPVSSEEKGKKGDKGKQVVPCNTPQLHINIPHIDALEQMPNYTKFLKDI
IYRRKKLGEHETVALTKCSSDTLGNPLPVKFTFNVLDAMLLPDEVEDCSAIGAIIEELQVMIVEVLEADLEVVEKEAKIASGVILPQFEHVELLQPTIADLKALKHSIIK
PPELEKKPLTSHLKYAYLSFF