; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g28570 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g28570
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationchr6:21516864..21519897
RNA-Seq ExpressionMoc06g28570
SyntenyMoc06g28570
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]3.1e-3660.65Show/hide
Query:  RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSRR--NSHQESRG
        +TW+AKV AIQEAKDLTKLPLEELIGSLMTHEI M+EHLEDESKKKKS AL +   + E  D+  L+E+++ Y +RK+KN  K+K   ++  ++ + S+G
Subjt:  RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSRR--NSHQESRG

Query:  EKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE
        EKS K +++ICYECKK+ H++ DCP LK SSKKSKRK  KATWDDS ES +E +E
Subjt:  EKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE

TYK29684.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]2.6e-3561.49Show/hide
Query:  MAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSRR--NSHQESRGEKSNKHE
        M IQEAKDLTKLPLEELIGSLMTHEI M EHLEDESKKKKS ALK+   + +  DE  L+++++ YL+RK+KN  KKK + ++  ++ +ES+GEKS K +
Subjt:  MAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSRR--NSHQESRGEKSNKHE

Query:  DIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE
        ++ICYECKK  H++ DCP LK SSKKSK+KT KATWDDS ES +E ++
Subjt:  DIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE

XP_022143648.1 uncharacterized protein LOC111013509 [Momordica charantia]6.6e-3958.02Show/hide
Query:  EGAKLVLRGI-RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSR
        E  + +LR + ++WE KV AIQEAKDL+KLPLEELIGSLMTHEI MK ++E++ KKKKS ALKST  Q  S  E +LNEEELAYL++KFK HFKK++F +
Subjt:  EGAKLVLRGI-RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSR

Query:  RNSHQESRGEKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEE
        + + Q+++GEK N  + IICYECKK GHV+ +CP L+ SS +  +K  KATWD+SD  ++ E
Subjt:  RNSHQESRGEKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEE

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]7.1e-4160.84Show/hide
Query:  EGAKLVLRGI-RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSR
        E  + +LR + +TWEAKV AIQEAKDLTKLPLEELIGSLMTHEI MKEHLEDESKKKKS ALK+   + +  DE  L+E+++AY +RK+KN  K+K + +
Subjt:  EGAKLVLRGI-RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSR

Query:  R--NSHQESRGEKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE
        +  ++ +ES+GEKS K +++ICYECK+ GH++ DCP LK SSKKSK+K  KATWDDS ES +E +E
Subjt:  R--NSHQESRGEKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE

XP_038895919.1 uncharacterized protein LOC120084093 [Benincasa hispida]6.6e-3958.58Show/hide
Query:  SLAAGEGAKLVLRGI-RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKK
        S    E  + +LR + ++WEAKV  IQEAKDL+KLPLEEL+GSLM HEI MK ++E++ KKKK+  LKST  QE+S  E +LN+EE AYL +KFK HF+K
Subjt:  SLAAGEGAKLVLRGI-RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKK

Query:  KNFSRRNSHQESRGEKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE
        +NFS++ ++QE +GEKSN+ + IICYECKK GHV +D PQ K  SKKS RK  KAT D+SDES  E +E
Subjt:  KNFSRRNSHQESRGEKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE

TrEMBL top hitse value%identityAlignment
A0A438IQK9 Retrovirus-related Pol polyprotein from transposon RE11.7e-2750.58Show/hide
Query:  VLRGIRT-WEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHL-EDESKKKKSTALKSTPTQEESNDEFKLNEE--ELAYLTRKFKNHFK------KK
        +LR + + W  KV AIQEAKDLTKLP+EEL+GSLMT+EI++ + L E E KKKKS ALK+T  +EE  +E K +EE  +LA +TRK   + +      KK
Subjt:  VLRGIRT-WEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHL-EDESKKKKSTALKSTPTQEESNDEFKLNEE--ELAYLTRKFKNHFK------KK

Query:  NFSRRNSHQE--SRGEKSNKHE--DIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE
          SRRNS +E  S G+K    E  D+IC++CKK GH+KYDCP  K  +K+  +K   ATW +S+ES+ EE E
Subjt:  NFSRRNSHQE--SRGEKSNKHE--DIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE

A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.5e-3660.65Show/hide
Query:  RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSRR--NSHQESRG
        +TW+AKV AIQEAKDLTKLPLEELIGSLMTHEI M+EHLEDESKKKKS AL +   + E  D+  L+E+++ Y +RK+KN  K+K   ++  ++ + S+G
Subjt:  RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSRR--NSHQESRG

Query:  EKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE
        EKS K +++ICYECKK+ H++ DCP LK SSKKSKRK  KATWDDS ES +E +E
Subjt:  EKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE

A0A5A7TZF4 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.1e-3460.14Show/hide
Query:  MAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSRR--NSHQESRGEKSNKHE
        M IQEAKDLTKLPLEELIGSLMTHEI M EHLEDESKKKKS ALK+   + +  DE  L+++++ YL+RK+KN  K+K + ++  ++ +ES+GEKS K +
Subjt:  MAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSRR--NSHQESRGEKSNKHE

Query:  DIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE
        ++ICYECKK  H++ DCP LK SSKKSK+K  KATWDDS ES +E ++
Subjt:  DIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE

A0A5D3E1G2 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.3e-3561.49Show/hide
Query:  MAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSRR--NSHQESRGEKSNKHE
        M IQEAKDLTKLPLEELIGSLMTHEI M EHLEDESKKKKS ALK+   + +  DE  L+++++ YL+RK+KN  KKK + ++  ++ +ES+GEKS K +
Subjt:  MAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSRR--NSHQESRGEKSNKHE

Query:  DIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE
        ++ICYECKK  H++ DCP LK SSKKSK+KT KATWDDS ES +E ++
Subjt:  DIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE

A0A6J1CR79 uncharacterized protein LOC1110135093.2e-3958.02Show/hide
Query:  EGAKLVLRGI-RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSR
        E  + +LR + ++WE KV AIQEAKDL+KLPLEELIGSLMTHEI MK ++E++ KKKKS ALKST  Q  S  E +LNEEELAYL++KFK HFKK++F +
Subjt:  EGAKLVLRGI-RTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKNFSR

Query:  RNSHQESRGEKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEE
        + + Q+++GEK N  + IICYECKK GHV+ +CP L+ SS +  +K  KATWD+SD  ++ E
Subjt:  RNSHQESRGEKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCATCTTCTTTAGGGACAGAAAATCTGGTTGAATCAGCTTTGGTAGCTCAAAACAAAGAGAAGACAGAGATGAATTACAACAGGAAGCAGCAACATAGGAATAA
CAGGGGTAGTGGAAGTTCCAGTGGAGAAGTGGAGTGTTATTACTGTCACAAGAAGGGACAAGTTAAATACTTTTGCAGGAAGTTCAAAAAAGATTTTGAGAAGGGGAACA
ATACTGCAAATGTTGCAACAGGAGAAGAACGGATTGAAGAGTTTCTGGCTTGTGTTGAGAGGAACATATATGTAGACCATTGGGTAATGGACACAACAACATCAGCGCAT
GTTGCTTCAGACAGACGTTGGTTCTCATCTCTTGCTGCAGGCGAAGGGGCTAAGTTGGTGCTACGAGGCATCAGGACTTGGGAAGCAAAGGTGATGGCAATCCAAGAAGC
CAAGGATCTCACCAAACTTCCTTTAGAGGAACTTATTGGCTCACTCATGACTCATGAGATTACCATGAAGGAGCACTTGGAAGATGAGTCTAAAAAGAAGAAAAGTACTG
CTTTGAAGTCCACACCCACCCAAGAGGAGTCCAATGATGAGTTTAAGCTCAATGAAGAAGAACTTGCTTATCTCACGAGGAAATTCAAAAATCACTTTAAGAAGAAGAAT
TTCTCAAGAAGAAATTCTCACCAAGAATCAAGAGGAGAAAAGAGCAATAAACATGAAGATATTATTTGCTATGAGTGTAAGAAAGTGGGGCACGTGAAGTATGATTGTCC
ACAACTAAAGTTTTCTTCAAAGAAATCCAAAAGGAAGACATTTAAAGCTACTTGGGATGACTCCGACGAGAGTAATAACGAAGAAGATGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCATCTTCTTTAGGGACAGAAAATCTGGTTGAATCAGCTTTGGTAGCTCAAAACAAAGAGAAGACAGAGATGAATTACAACAGGAAGCAGCAACATAGGAATAA
CAGGGGTAGTGGAAGTTCCAGTGGAGAAGTGGAGTGTTATTACTGTCACAAGAAGGGACAAGTTAAATACTTTTGCAGGAAGTTCAAAAAAGATTTTGAGAAGGGGAACA
ATACTGCAAATGTTGCAACAGGAGAAGAACGGATTGAAGAGTTTCTGGCTTGTGTTGAGAGGAACATATATGTAGACCATTGGGTAATGGACACAACAACATCAGCGCAT
GTTGCTTCAGACAGACGTTGGTTCTCATCTCTTGCTGCAGGCGAAGGGGCTAAGTTGGTGCTACGAGGCATCAGGACTTGGGAAGCAAAGGTGATGGCAATCCAAGAAGC
CAAGGATCTCACCAAACTTCCTTTAGAGGAACTTATTGGCTCACTCATGACTCATGAGATTACCATGAAGGAGCACTTGGAAGATGAGTCTAAAAAGAAGAAAAGTACTG
CTTTGAAGTCCACACCCACCCAAGAGGAGTCCAATGATGAGTTTAAGCTCAATGAAGAAGAACTTGCTTATCTCACGAGGAAATTCAAAAATCACTTTAAGAAGAAGAAT
TTCTCAAGAAGAAATTCTCACCAAGAATCAAGAGGAGAAAAGAGCAATAAACATGAAGATATTATTTGCTATGAGTGTAAGAAAGTGGGGCACGTGAAGTATGATTGTCC
ACAACTAAAGTTTTCTTCAAAGAAATCCAAAAGGAAGACATTTAAAGCTACTTGGGATGACTCCGACGAGAGTAATAACGAAGAAGATGAATAA
Protein sequenceShow/hide protein sequence
MSASSLGTENLVESALVAQNKEKTEMNYNRKQQHRNNRGSGSSSGEVECYYCHKKGQVKYFCRKFKKDFEKGNNTANVATGEERIEEFLACVERNIYVDHWVMDTTTSAH
VASDRRWFSSLAAGEGAKLVLRGIRTWEAKVMAIQEAKDLTKLPLEELIGSLMTHEITMKEHLEDESKKKKSTALKSTPTQEESNDEFKLNEEELAYLTRKFKNHFKKKN
FSRRNSHQESRGEKSNKHEDIICYECKKVGHVKYDCPQLKFSSKKSKRKTFKATWDDSDESNNEEDE